Lutra lutra (Eurasian river otter): 125090847
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Entry
125090847 CDS
T08100
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125090847
Enzymes [BR:
llv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125090847
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125090847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-RING_5
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
125090847
NCBI-ProteinID:
XP_047569948
LinkDB
All DBs
Position
18:complement(32665484..32673560)
Genome browser
AA seq
771 aa
AA seq
DB search
MVSQGSSPSLLEALSSDFLACKICLEQLRAPKTLPCLHTYCQDCLAQLADGGHLRCPECR
ETVPVPPAGVAAFKTNFFVNGLLDLVRARAGGDLRAGKPACALCPLMGGAGTGGPATARC
LDCADDLCQACADGHRCTRQTHTHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL
CQPCSQLLCRECRLDPHLDHPCLPLAEAVRARRPGLEELLAGVDNNLAELESARMVEKEA
LARLRERAARVGTQVEEVAEGVLRALLAQKQEVLGQLRAHVEAAEEAARERLGELEGREQ
VARAAAAFARRVLSLGREAEILSLEGAIAQRLRQLQGCPWMPGPAPCLLPRLELHPGLLD
KNGHLLRLCFEEQQPQKDSGKDEAGGQGGDEAQSQREGGAKSERQGGIQPQSRDGAYTPK
ENRAQTPQEEGAQTPKEERAKTPQEDGAQTPKEGRAQTPLEDEGAQTPRGSRSNKKRKFK
GRLKSISREPSPAPGLNLEGSGLLPRPIFSCSFPTRMPGDKRSPRITGLCPFGPREILVA
DEQNRALKRFSLSGDYRGAVPVPEGCSPCSVAALQGAVAFSAGARLYLISPDGEVQWRRA
LSLSQASHAVAAMPSGDRVAVSVSGHVEVYNMEGSLATRFIPGGKANRGLRALVFLTTSP
QGNFVGSDWQQNSVVVCDGLGQVIGEYRGPGLHGCQPGSVSVDKKGYIFLTLREVNKVVI
LDPKGSLLGDFLTAYHGLEKPRVTTMVDGRHLVVSLSNGTIHVFRVRPPDS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccaggggtcctcaccctccctcctggaagccctgagcagcgatttcctggcc
tgtaaaatatgcctggagcagcttcgcgcccccaagacattgccctgcctgcacacctac
tgccaggactgcctggcccagctggccgatggcggccacctgcgctgccctgagtgccgg
gagaccgtgcctgtgccgcctgcgggtgtggccgccttcaagaccaacttcttcgtcaac
gggctcttggatctggtgagggcccgggctggcggagacctgcgcgcggggaagcctgcc
tgtgcactgtgtcccctgatggggggggccggcaccggggggccggccacggcccggtgc
ttggactgtgcggacgacctatgccaggcgtgtgccgacggccaccgttgcacccggcag
acccacacccaccgggtggtggacctggtgggctacagggcaggctggtatgacgaggag
gcccgggagcgccaggcggcccagtgcccccagcaccctggggaagccctgcgcttcctg
tgccagccctgctcccagctgctgtgccgcgagtgccgcctggacccccacctggaccac
ccctgcctacccctggccgaggccgtgcgcgcccggaggcccggcctggaggagctgctg
gcgggtgtggacaacaacctggcggagctcgagtccgcccggatggtggaaaaggaagcc
ttggcccggctgcgggagcgggcggctagggtggggacccaggtggaggaggtggccgag
ggggtgctccgggccctcctggcccagaagcaagaggtgctggggcagctacgggcccac
gtggaggctgcggaggaggccgctcgagagagactgggggagctggagggccgggagcag
gtggccagggcggcggccgcctttgcccgacgggtgctcagcctgggccgcgaggctgag
atcctctcgctggaaggggcgattgcccagaggctccgacagctgcagggctgcccctgg
atgcctgggccggccccctgcctgctgccccggctggagctccatcctgggctcctggac
aagaacggccacctgctacggctctgctttgaggagcagcagccccagaaggacagtggg
aaagacgaagctggaggccagggaggggatgaagctcagagccagagagaggggggagcc
aagtcggagagacaaggtggaatccagccccagagcagggatggcgcttacaccccaaag
gagaacagagcccagacaccccaggaagagggagcccagaccccgaaggaggagagagcc
aagacgccccaggaagatggagcccagaccccaaaagagggcagagcccagacaccccta
gaagacgaaggagcccagaccccgaggggcagcagatccaacaagaagaggaagttcaaa
ggcaggctcaagtccatttcccgggagcccagcccagcccctgggctaaacctggagggc
tccggtctcctccccaggcccattttctcctgcagcttccccacacgcatgcctggagac
aagcggtctcctcggatcaccgggctctgtcccttcggcccccgggagatcctggtggcc
gatgagcagaacagggcactgaagcgcttctccctcagtggtgactacaggggcgcggtg
cccgtccctgagggctgctccccgtgcagcgtggccgccctgcagggggcagtggccttc
tcggccggcgcacggctctacctcatcagccccgacggcgaggtgcagtggcggcgggcc
ctgagtctctcccaggccagccacgccgtggccgcgatgccgagcggggaccgggtggcc
gtcagcgtgtcgggccacgtggaggtgtacaacatggaaggcagcctggccacccggttt
atcccggggggcaaggccaacaggggcctgcgggctctggtgttcctgaccaccagcccc
cagggcaattttgtggggtccgactggcagcagaacagcgtggtggtctgtgacgggctg
ggtcaggtgatcggggagtaccgggggccgggcctgcacggctgccagccaggctctgtg
tccgtggataagaagggctacatctttctgacccttcgcgaggtcaacaaagtggtgatc
ctggatccgaaggggtcactgctcggcgacttcctgacggcctatcacggcctggaaaag
cccagggtgaccaccatggtggatggcaggcacctggttgtgtccctcagtaatgggacc
atccacgtctttcgggtccgccctcctgatagttaa
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