Lutra lutra (Eurasian river otter): 125090849
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Entry
125090849 CDS
T08100
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03030
DNA replication
llv03410
Base excision repair
llv03420
Nucleotide excision repair
llv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125090849
03410 Base excision repair
125090849
03420 Nucleotide excision repair
125090849
03430 Mismatch repair
125090849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llv03032
]
125090849
03036 Chromosome and associated proteins [BR:
llv03036
]
125090849
03400 DNA repair and recombination proteins [BR:
llv03400
]
125090849
DNA replication proteins [BR:
llv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125090849
DNA Replication Termination Factors
ELG1-RFC complex
125090849
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125090849
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125090849
Check point factors
HRAD17(Rad24)-RFC complex
125090849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_16
AAA_14
AAA_24
Viral_helicase1
Mg_chelatase
AAA_11
Rad17
RuvB_N
AAA_19
nSTAND3
MipZ
DNAX_ATPase_lid
AAA_5
AAA_18
AAA_assoc_2
AAA_28
AAA_25
ABC_tran
AAA_30
AAA_23
RCF1-5-like_lid
NTPase_1
bpMoxR
MeaB
RNA_helicase
FtsK_SpoIIIE
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
125090849
NCBI-ProteinID:
XP_047569957
LinkDB
All DBs
Position
18:30257884..30275057
Genome browser
AA seq
352 aa
AA seq
DB search
MEVEESGGGAGERGAQDPAPAPSKGPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEV
FAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAFKDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQ
SRCAVLRYTKLSDAQVLARLLAVLEQEKVPYTDDGLEAVIFTAQGDMRQALNNVQSTFSG
FGFINSENVFKVCDEPHPLLVKEMIQHCVNADIDEAYKILAHLWHLGYSPEDIIGNIFRV
CKTFQMAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTMAPVAS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggaggagagcggcggtggcgcgggagagcgcggggcccaggaccctgccccc
gcccccagcaagggcccgggcagcgccggccactacgagctgccgtgggtggaaaaatac
aggccagtgaagttgaatgaaattgttgggaatgaagacacagtgagcaggctggaggtc
tttgcaagagaaggaaacgtgcccaatattatcattgctggccccccaggaaccggcaag
actacaagcatcctgtgtttggcacgcgccctgctgggccccgcattcaaggatgctgtt
ttggagctcaacgcctccaatgacaggggtatcgatgtggtgaggaacaaaatcaaaatg
ttcgcccagcagaaggtcacgcttcccaaaggacggcataagatcatcatcttggacgaa
gcagacagcatgactgatggagcccagcaagccttgaggaggaccatggaaatctactcc
aaaacgactcgctttgctctcgcctgtaacgcttccgataaaatcatagagcccatccag
tcccgctgtgctgtcctccgctacacgaagctgagcgacgcccaggtcctcgcccggctg
ctggcggtgctggagcaggagaaggtcccctacaccgacgacggcctggaagctgtcatc
ttcacagcgcagggagacatgaggcaggcgctgaacaacgtgcagtcgaccttctcagga
ttcggctttattaacagcgagaatgtgttcaaggtctgcgacgagccccaccccttgctg
gtgaaggagatgatccagcactgtgtgaacgccgacatcgacgaggcctacaagattctc
gctcacctgtggcatctcggctactcgccggaagacatcattggcaacatttttcgagtg
tgtaaaaccttccagatggcggagtacttgaaactggagttcatcaaggaaatcggatac
acgcatatgaagatagcagaaggcgtgaactccctcctgcagatggcagggctcctggcc
aggctgtgtcagaagacaatggccccggtggccagttag
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