Lutra lutra (Eurasian river otter): 125090930
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Entry
125090930 CDS
T08100
Name
(RefSeq) inactive rhomboid protein 1 isoform X1
KO
K27588
inactive rhomboid protein
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04668
TNF signaling pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
125090930
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GFIT
Motif
Pfam:
iRhom1-2_N
Rhomboid
Motif
Other DBs
NCBI-GeneID:
125090930
NCBI-ProteinID:
XP_047570147
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Position
18:complement(58321..75496)
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AA seq
984 aa
AA seq
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MAFPGGRAGRARGRGLGAGALPAGGGGGGSGSPSPEPSGPRGPPRPGAGGGGPSCPSGAM
SEARRDSTSSLQRKKPPWLRLDIPAAAPPAAEEPGFFQVGPGRQGLGGCPVQPPHCDPAA
QPLRRQAFLRSVSMPAETARVPSPHREPRRPVLQRQTSITQTIRSRQVRFGRVHTLPLLG
PPAARRALPQRRSLSRSLLRGTADWFGVSKDSDSTQKWQRKSIRHCSQRYGKLKPQVMRE
LDLPSQDNVSLTSTETPPPLYVGPCQLGMQKIIDPLARGRAFRVADDTADGLSTPHTPVT
PGAASLCSFSSSRSGFSRLPRRRKRESVAKMSFRAAAALVKGRSLRDGTLRRVQRRSFTP
ASFLEEDTADFPDELDTSFFAREGVLHEELSTYPDEVFESPSEAALKDWEKATEQADLTG
GALDRSELERSHLMLPLERGWRKQKEGGAAAPQPKVRLRQEVVSAAGQRRGQRISMPVRK
FFAREKRPYGLGMVGRLTNRTYRKRIDSYVKRQIEDMDDHRPFFTYWLTFVHSLVTILAV
CIYGIAPVGFSQHETVDSVLRNRGVYENVKYVQQENFWIGPSSEALIHLGAKFSPCMRQD
PQVHSFIRAAREREKHSACCVRNDRSGCVQTSEEECSSTLAVWVKWPLHPSAPDLAGHKR
QFGSVCHQDPRVCDEPSSEDPHEWPDDITKWPICTKNSAGNHTNHPHMDCVLTGRPCCIG
TKGRCEITSREYCDFMRGYFHEEATLCSQVHCMDDVCGLLPFLNPEVPDQFYRLWLSLFL
HAGQVIPCGLSCARILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL
PYRAEVGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLSAVVLFLFTFGLLPWIDNFA
HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIVVFQAVFLGLLAGLVVLFYFYPVRCEW
CEFLTCIPFTDKFCEKYELDAQLH
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggcattcccgggcgggcgggccggacgggcgcgcgggcggggactcggcgcgggcgcc
ctcccggccggcggcggcggcggcggcagcggcagcccctccccggagccctcaggaccc
cgaggacccccgcgacccggggccggcggcggcggcccgtcgtgcccctctggcgccatg
agcgaggcccgcagggacagcaccagcagcctgcagcgcaagaagccgccctggctgagg
ctggacatcccggcggcagcacccccagcggcggaggagcctggcttcttccaggtaggc
cccggccggcaggggctgggggggtgccctgtccagcctcctcactgcgaccccgccgcc
cagcccctgagacgccaggctttcctgcggagcgtgagtatgcccgccgagaccgcccgt
gtcccctcgccccaccgtgagccccggcggcccgtcctgcagcgccagacgtccatcaca
cagaccatccgcagccgacaggtgcgcttcgggcgtgtccacactctgcccctcttgggt
ccccccgctgcccgcagggctctcccacagcgccggtctctttctcggtccctgctcagg
ggcaccgcggactggttcggggtgagcaaggacagtgacagcacccagaagtggcagcgg
aagagcatccgtcactgcagccagcgctacggaaagctgaagccccaggtcatgcgggag
ctcgacctgcccagccaggacaacgtgtctctgaccagcacagagacgccccctccgctg
tatgtgggcccgtgtcagctgggcatgcagaagatcatagaccccctggcccggggccgg
gccttccgcgtggcggatgacacggccgacggcctgagtaccccgcacacacctgtcacg
ccgggtgccgcttccctctgctccttctccagctcccgctcgggcttcagccggctcccg
cggcgacgcaagcgcgaatccgtggccaagatgagcttccgggcagccgcggccctggtg
aagggccgctctcttagggacggcacgttacgccgggtgcagcgccggagctttactccc
gccagtttcctggaggaggacacggcggacttccccgacgagctggacacgtccttcttt
gcccgggaaggagtcctccatgaggagctgtccacgtacccggacgaggtgttcgagtcc
ccttcggaggccgcgctcaaggactgggagaaggccaccgagcaggccgacctcacgggt
ggggccctggaccgcagtgagctcgagcgcagtcacctgatgctgcccctggaacgaggc
tggcggaagcagaaggaggggggcgcagcagccccgcagccgaaagtgcggctgcggcag
gaggtggtgagcgctgcgggccagcggcggggccagcgcatttccatgcccgtgcgcaag
ttctttgcccgggagaagcggccgtacgggctgggcatggtgggccggctcaccaaccgc
acctaccgcaagcggatcgacagctacgtcaagcggcagatcgaggacatggacgaccac
aggcctttcttcacctactggctcaccttcgtgcattcgctcgtcaccatcctggccgtg
tgcatctatggcatcgcgcccgtgggcttctcgcagcacgagacggtggactcggtgctg
cggaaccgtggggtctatgagaacgtcaagtacgtgcagcaggagaacttctggatcggg
cccagctcggaggcgctcattcacctgggcgccaagttctcgccctgcatgcgccaggac
ccgcaggtgcacagtttcatccgcgcggcgcgggagcgggagaagcactcggcctgctgc
gtgcgcaacgaccggtcgggctgcgtgcagacgtcggaggaggagtgctcgtccacgctg
gcagtgtgggtgaagtggcccctccaccccagtgccccagaccttgccggccacaagagg
cagtttggctctgtctgccaccaggaccccagggtgtgtgatgagccttcctcggaggac
ccccacgagtggccggatgacatcaccaagtggccgatctgcaccaaaaacagtgccggg
aaccacaccaaccacccgcacatggactgtgtcctcacgggccggccatgctgcatcgga
accaagggcaggtgtgagatcacctcccgggagtactgtgacttcatgaggggctacttc
cacgaggaggccaccctgtgctcgcaggtgcactgcatggatgacgtgtgtgggctcctg
cccttcctcaaccccgaggtgcctgaccagttctaccgcctgtggctctccctcttcttg
cacgctgggcaagtgataccatgtgggctgagctgtgccaggatcctgcactgcctggtg
tccgtctgcttccagatgaccgtcctgcgggacctggagaagctggccggctggcaccgc
atagccatcatctacctgctgagtggggtcactggtaacctggccagtgccatcttcctg
ccataccgggcagaggtgggcccagctggctcccagtttggcatcctggcctgcctgttc
gtggagctcttccagagctggcaggtcctggcgcggccctggcgagccttcttcaagctg
tcggcggtggtcctcttcctgtttaccttcgggctgctgccctggatcgacaacttcgcg
cacatctcaggtttcatcagcggcctcttcctgtccttcgccttcctgccctacatcagc
tttggcaagttcgacctgtaccgtaagcgctgtcagatcgtcgtcttccaggcggtcttt
ctgggcctcctggccggcctggtggtgctcttctacttctaccccgtgcgctgcgagtgg
tgcgagttcctcacctgcatccccttcaccgacaagttctgcgagaagtatgagctggac
gcgcagctccactga
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