Lutra lutra (Eurasian river otter): 125090957
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Entry
125090957 CDS
T08100
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04120
Ubiquitin mediated proteolysis
llv04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125090957
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125090957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125090957
Enzymes [BR:
llv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125090957
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125090957
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
125090957
NCBI-ProteinID:
XP_047570207
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All DBs
Position
18:3710291..3768133
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AA seq
570 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDGADSPSEDSEKPRVLYSL
EFTFDADARVAITIYCQAVEEFLNGMAVYSPKSPALQSETAHYKRGVSQQFSLPSFKIDF
SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQK
QIVDRVSYLLQEIYGIENKNNQETKPSDEENSDNSNECVVCLSDLRDTLILPCRHLCLCN
SCADTLRYQASNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSMDHDEHSCPFKK
SKAHPASLASKKPKRETSSDSIPPGYEPISLLEALNGLRAISPAIPSAPLYEEITYSGVS
DGLSQASCPLAGMDRILESSHQKGKPRSKSPDSTLRSPSSPIHEEDEEKLSQDSDAPPPL
SGAGLALSSSPESFVTEEADEAAALKQGSRVPSFENVLQDGSPEACSHGQPCLPADVYLP
GWSTSMETPHSLRTAGPPRPDPGATELTPL
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgggctccattctgagccgccgcatcgcgggcgtggaggacatcgacatccaggcgaac
tcggcctatcgctacccgccgaagtctggaaactactttgcctcacactttttcatggga
ggtgagaaatttgacaccccccaccctgaaggttacctctttggagaaaacatggatctg
aatttcctgggcaatcgcccagtccagtttccatacgtcacccctgccccccatgagcca
gtgaagacactcaggagcctggtgaacatccggaaggactccctgcggcttgtgaggtac
aaagatggggccgacagcccttcagaggacagtgagaagccccgagtcctctacagcctg
gagttcacctttgacgctgacgcccgggtggccatcaccatctactgccaggcggtggag
gagttcctgaacgggatggcagtgtacagccccaagagccccgccctgcagtccgagacc
gcccactacaagagaggggtgagccagcagttctccctgccctccttcaagatcgacttc
tccgagtggaaggatgatgagttgaacttcgacctggaccggggcgtgtttccagtggtc
atccaggccgtggtggatgaaggagatgttgtggaagtgactggccatgcccatgtgctc
ttggccgcctttgaaaagcatgtcgacggcagcttctctgtgaaacctttaaagcagaag
caaattgtggaccgggtcagctacctgctgcaggagatctacggcatcgagaacaagaac
aaccaggagacgaagccctcagatgaggagaacagcgacaacagcaacgagtgtgtggtg
tgcctctcagaccttcgggacacgctcatcctgccgtgccggcacctgtgcctgtgtaac
tcgtgcgcggacacgctgcgctaccaggccagcaactgccccatctgccggctgcccttc
cgggcccttttgcagatccgggcggtgaggaagaagccgggagccctgtcccctgtctcc
ttcagccctgttctggcccagagcatggaccatgatgagcattcatgtccctttaaaaaa
tcaaaggcgcaccccgcctcactggccagcaagaaacctaaaagggaaacaagctctgac
agcatcccacctggctatgagcccatctccctacttgaggcgctcaacggccttcgggcc
atctccccggccatcccttcagcccccctttatgaagagatcacctactcaggcgtctca
gatggcctgtcccaggccagttgtccacttgcggggatggatcgaatcctggaaagcagc
caccagaagggcaagccaaggagcaaatcccctgacagcacccttcggtctccgtcttcc
cccatccacgaagaggatgaggagaagctgtcccaggactcagacgcccctcccccactg
agtggggcggggctggcgctcagcagctcccccgagagctttgtcacggaggaggctgac
gaggcggcggccctgaagcaggggagccgagtgccatcctttgagaatgtcctacaggat
ggcagccctgaggcctgcagccatggccagccctgcctgcccgccgatgtctacctgcca
ggatggtccacctccatggagacgccccacagcctccgtaccgctggcccaccccggcct
gaccctggggccactgagctgaccccactttga
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