Lutra lutra (Eurasian river otter): 125090978
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Entry
125090978 CDS
T08100
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A isoform X1
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04014
Ras signaling pathway
llv04015
Rap1 signaling pathway
llv04020
Calcium signaling pathway
llv04024
cAMP signaling pathway
llv04080
Neuroactive ligand-receptor interaction
llv04082
Neuroactive ligand signaling
llv04713
Circadian entrainment
llv04720
Long-term potentiation
llv04724
Glutamatergic synapse
llv04728
Dopaminergic synapse
llv05010
Alzheimer disease
llv05014
Amyotrophic lateral sclerosis
llv05017
Spinocerebellar ataxia
llv05020
Prion disease
llv05022
Pathways of neurodegeneration - multiple diseases
llv05030
Cocaine addiction
llv05031
Amphetamine addiction
llv05033
Nicotine addiction
llv05034
Alcoholism
llv05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
125090978
04015 Rap1 signaling pathway
125090978
04020 Calcium signaling pathway
125090978
04024 cAMP signaling pathway
125090978
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125090978
04082 Neuroactive ligand signaling
125090978
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
125090978
04728 Dopaminergic synapse
125090978
04720 Long-term potentiation
125090978
09159 Environmental adaptation
04713 Circadian entrainment
125090978
09160 Human Diseases
09163 Immune disease
05322 Systemic lupus erythematosus
125090978
09164 Neurodegenerative disease
05010 Alzheimer disease
125090978
05014 Amyotrophic lateral sclerosis
125090978
05017 Spinocerebellar ataxia
125090978
05020 Prion disease
125090978
05022 Pathways of neurodegeneration - multiple diseases
125090978
09165 Substance dependence
05030 Cocaine addiction
125090978
05031 Amphetamine addiction
125090978
05033 Nicotine addiction
125090978
05034 Alcoholism
125090978
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
llv04040
]
125090978
Ion channels [BR:
llv04040
]
Ligand-gated channels
Glutamate (ionotropic)
125090978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
125090978
NCBI-ProteinID:
XP_047570256
LinkDB
All DBs
Position
18:complement(7853450..8217210)
Genome browser
AA seq
1464 aa
AA seq
DB search
MGRLGYWTLLVLPALLVWRGPAQGAAAEKGTPALNIAVLLGHSHDVTERELRNLWGPEQA
AGLPLDVNVVALLMNRTDPKSLITHVCDLMSGARIHGLVFGDDTDQEAVAQMLDFISSQT
FIPILGIHGGASMIMADKDPTSTFFQFGASIQQQATVMLKIMQDYDWHVFSLVTTIFPGY
RDFISFIKTTVDNSFVGWDMQNVITLDTSFEDAKTQVQLKKIHSSVILLYCSKDEAVLIL
SEARSLGLTGYDFFWIVPSLVSGNTELIPKEFPSGLISVSYDDWDYSLEARVRDGLGILT
TAAYSMLEKFSYIPEAKASCYGQTEKPDTPPHTLHQFMVNVTWDGKDLSFTEEGYQVHPR
LVVIVLNKDREWEKVGKWENQTLSLRHAVWPRYKSFSDCEPDDNHLSIVTLEEAPFVIVE
DIDPLTETCVRNTVPCRKFVRINNSTNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLV
TNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRS
NGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHGPSFT
IGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVD
QVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNYPYMHQYMTKFNQKGVEDALVSL
KTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQIDLALL
QFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFIWEHL
FYWKLRFCFTGVCSDRPGLLFSISRGIYSCIHGVHIEEKKKSPDFNLTGSQSNMLKLLRS
AKNISDVSNVNSSRMDSPKRAADFIQRGSLIVDMVSDKGNMIYSDNRSFQGKDSIFGDNM
SELQTFVASRHKDNLNNYVFQGQHPLTLNESNPNTVEVAVSTESKANSRPRQLWKKSMES
LRQDSMSQNPVSQRDEGAAENRTHSLKSPRYLPEEVAHSDVSETSSRATCHREPDNSKNH
KTKDNFKRSVASKFPKDCSEAERSHLKTKAGSPRDKIYTIDSEKEPSFHLDPPQFVENMA
LPENVDFPDPYQEPNENFRKGDPGLPTNRTALHTEDVLPNNDKHKFYSKHFTLKDKSSPH
SEGGDRYRQNSTHCRSCLSNLPAYSGHFTVRSPFKCDACLRMGNLYDIDEDQMLQETGSP
AAQEEVYQQDWAQNSTLQFQKNKLRISRQHSYDNIVDKPREIDLSRPSRSISLKDRERLL
EGNLYGSLFSVPASKLSGNKSALFPQGLEDSKRSKSLLPDHASDNPFLRCYGDDRRLVIG
RCPSDPYKHSLPSQAGNDSYLRSSLRSTASYCSRDSRGPGDVYIPEHVMPYAANKNSMYS
NPRVLNPCSNRRVYKKMPSIESDV
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgggcagactgggttattggaccctgctggtgctgccggcccttctggtctggcgcggc
ccggcgcagggcgcggcggcggagaagggtaccccggcgctgaacattgcggtgctgctg
ggtcacagccacgacgtgacggagcgcgaactgcgaaacctgtggggcccagagcaggca
gcagggctgcccctggacgtgaacgtggtagccctgctgatgaaccggacggaccccaag
agcctcattacgcatgtgtgcgacctcatgtctggggcgcgcatccatggccttgtcttt
ggggacgacaccgaccaggaggccgtggctcagatgctggattttatctcttcgcagact
ttcatacccatcctgggcatccacgggggcgcatctatgatcatggctgacaaggaccca
acatcaaccttcttccagttcggagcgtccatccagcaacaagccacggtcatgctgaag
atcatgcaggattacgactggcacgtcttctccctggtgaccaccatcttccccgggtac
agggacttcatcagcttcatcaagaccaccgtggacaacagctttgtgggctgggacatg
cagaacgtgatcaccttggacacttcctttgaggacgccaagacccaggtccagctgaag
aagatccactcctccgtcatcctgctctactgttccaaagacgaggctgtcctcatcctg
agtgaggcccgctccctgggcctcaccggatatgatttcttctggatcgttcccagcttg
gtttctgggaacacagagctcatcccgaaggagttcccgtcaggcctcatttcggtctcc
tatgacgactgggactacagcctggaggcgcgggtgagggacggcctgggcatcctcacc
acggccgcgtattccatgttggagaagttctcctacatccccgaggccaaggccagctgc
tacgggcagacggagaagccggacaccccgccgcacactctacaccaattcatggtcaac
gtgacatgggatggcaaagacttgtccttcactgaggaaggctatcaggtgcaccccagg
ctggtggtgattgtgctgaacaaggaccgagaatgggagaaggtgggcaagtgggagaac
cagaccctgagcctgcggcacgccgtgtggccaaggtacaagtccttctcagactgtgag
ccggacgacaaccatctgagcatcgtcaccctggaggaggccccctttgtcatcgtggag
gacatagacccgttgaccgagacgtgcgtgaggaacaccgtgccgtgccggaagtttgtc
cgaatcaacaattcaaccaatgagggcatgaatgttaaaaaatgctgcaagggtttctgc
atcgatatcctgaagaagctttcccgcactgtgaagttcacctatgacctttacctggtg
actaatgggaagcatggcaagaaagtcaacaatgtgtggaacgggatgattggggaagtg
gtctaccaacgggcggtcatggcggtcggctcgctcaccatcaacgaggagcgctcggaa
gtggtggacttctccgtgccctttgtggagacggggatcagtgtcatggtttcaagaagc
aacggcactgtctcaccttctgcttttctagaaccgttcagcgcctccgtctgggtcatg
atgttcgtgatgctgctcattgtgtccgccatcgctgtttttgtcttcgagtacttcagt
cctgttggatacaacagaaacttagccaaagggaaagcaccccatgggccttctttcacg
attggcaaagctatatggctcctctggggcctggtgttcaacaactccgtgcctgtgcag
aaccccaaagggaccaccagcaagatcatggtgtctgtgtgggccttcttcgctgtcatc
ttcctggccagctacacggccaacctggctgctttcatgatccaggaggaattcgtggac
caagtgaccggcctcagtgacaaaaagtttcagagacctcacgactattccccacctttc
cgatttggcacggtgcctaacggcagtactgagagaaacattcgtaataactacccctac
atgcatcagtacatgaccaaattcaatcagaagggagtggaggatgccttggtcagcttg
aaaacagggaaactggacgctttcatctacgatgcggcggtcttgaattacaaggctggc
agggatgaaggctgtaagctcgtgaccatcggcagtgggtacatctttgccaccactggt
tacggaatcgccctccagaagggctcgccttggaagaggcagattgacctggccctgctc
cagtttgtgggtgatggcgagatggaggagctggagaccctgtggctcacggggatctgc
cacaacgagaagaacgaggtgatgagcagccagctggacatcgacaacatggcgggcgtg
ttctacatgctggcggccgccatggccctcagcctcatcaccttcatctgggaacacctc
ttctactggaagctgcgcttctgcttcaccggcgtctgctccgaccgcccggggctgctc
ttctccatcagcaggggcatttacagctgtatccacggggtgcacatcgaagagaagaag
aagtctccagacttcaacctgaccgggtcccagagcaacatgttaaagctgctccggtcg
gccaaaaacatctccgacgtgtccaacgtgaactcctcgagaatggattcccccaagagg
gctgcggacttcatccagagaggctccctcatcgtggacatggtttccgataagggaaat
atgatctactcggacaacaggtcctttcaggggaaagacagcatttttggggacaacatg
agtgagctgcagacgttcgtggccagcaggcacaaggacaacctcaacaactacgtgttc
cagggacagcaccccctgactctcaatgagtccaaccccaacacggtggaggtggccgtg
agcaccgagtccaaagcgaactcgaggccccggcagctgtggaagaaatccatggagtcg
ctgcgccaggactcgatgagccagaacccggtctcccagagggacgagggggcggccgag
aacaggacccactccctgaagagccctcggtaccttccggaagaggtggcccactcggac
gtttcggaaacttcgagtcgggccacgtgccacagggagcccgacaacagcaagaaccac
aagaccaaggacaacttcaagaggtccgtggcctccaaattccccaaggactgcagcgag
gccgagcgctcccacctgaaaaccaaagccggctcccccagggacaagatctacaccatc
gacagtgagaaggagcccagtttccacctggacccgccccagttcgtggaaaacatggcc
ctgcccgagaacgtggacttccccgacccctaccaggaacccaacgaaaacttccgcaag
ggggacccggggctgcccacaaacaggaccgccctgcacaccgaggacgtgctccccaac
aacgacaaacacaaattctactccaagcacttcactctgaaagacaagagctcccctcac
agcgagggcggcgaccggtaccggcagaactccacgcactgccggagctgcctgtccaac
ctgcccgcctactcgggccacttcaccgtgcggtcccccttcaagtgcgacgcctgcctg
cggatgggcaacctgtacgacatcgacgaagaccagatgctccaggagacgggcagcccg
gccgcccaggaggaggtctaccagcaggactgggcgcagaacagcaccctccagttccag
aaaaacaagctcaggatcagccgtcagcactcctacgataacatcgtggacaagcccagg
gagatagacctcagcaggccgtccaggagcatcagcctcaaggaccgggaacggctcctg
gaggggaatttgtacgggagcctctttagcgtgcccgccagcaaactctcggggaacaag
agcgccctcttcccgcagggtctggaggacagcaagcggagcaagtccctcttgcccgac
cacgcctccgataaccccttcctccgttgctatggggatgaccgacgcttagtcatcggg
aggtgcccctcggacccttacaagcactcgctgccgtcccaggccgggaacgacagctac
cttcgatcatccctgaggtcaacggcatcctactgctccagggacagcagaggccccggc
gacgtgtacattccagagcatgttatgccttatgctgcaaacaagaacagtatgtactct
aaccccagggttttgaacccctgcagcaatagacgtgtgtacaagaaaatgcctagtatt
gaatctgatgtttaa
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