Lutra lutra (Eurasian river otter): 125091001
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Entry
125091001 CDS
T08100
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125091001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
llv02000
]
125091001
Transporters [BR:
llv02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
125091001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ABC2_membrane_2
AAA_23
AAA_15
RsgA_GTPase
AAA_29
AAA_27
AAA_30
SRP54
Motif
Other DBs
NCBI-GeneID:
125091001
NCBI-ProteinID:
XP_047570302
LinkDB
All DBs
Position
18:16281084..16467628
Genome browser
AA seq
1673 aa
AA seq
DB search
MDLLWLNQFAVLLWKNFVLKKRKIFSLVVEICMTVFFSLLILLYRSNIKKTFQNVTVFHP
LLLMSSPDFMLNGNLEYELAYVPSKSDVVKNITETVKNTLNINFTVRGFSSEAQFEKYVQ
YEKKPMVRVVAAVVFDHDFKNSDDRLPLQVKYHLRFGAGTERTSDLLSSLVDTGWNTHIL
FPEVPPVGPRNPLKNDGGDPGYIKEGFLLLQHIIDQAIMTYHNGEAAKQMLNGAIILVNR
FPYPAYYMDPFWFNFSDLFPLIVILAFSLTELTLIRTIVSEKEKRLKEYQLMIGLSNAML
WASYFVSFFLMFLIIICLLCVILFVKIAPDVVIQYSDPSLVFVFFLCFVITSISFGFLIS
TLFDTATLAVSVGGFLYFLTFFPYVFVQTMYTQMHLTEKLVFCLLSNVAVALGVNIISQM
EMKQYGVQWDNIQSPVSPDDDLSFIHIMGMLLFDASLFGLMAWYMDAVFPGRYGVPKPWY
FFVQKSYWFGKALSVKYKEDKQIIDTIRSDYFEKEPVDLVAGIRIQHLYKEFTVEKDTIV
AVKNLTFNVYEGQITVLLGPNGAGKTTTLSILTGLILPTSGKVYISGYDISKDMVHIRND
LGFCPQDDILFSELTVSEHLYFYCVIKGVPPEIRATEVNNVLTSFDLLEKRDALAQSLSG
GMKRKLSIIIALIGGSKVVILDEPTSGMDPVSRRFTWSVLQQYRYDRTILLTTHHMDEAD
VLGDRIAIMVKGSLQCCGSSIFLKRIYGVGYHIIMVKEPHCNVEEIIEVINQHIPEARLE
SDVAAELSFILPKKYTHRFKDLLTDLENRQKELGISSFGVSITTMEEVFLRVIREDEEAF
QTPSLKEKNRKEDMNQNMNASGSFERSHSPTASEHSNIRFNTGWSLHCQQFYAMFIKRAM
FSWRNWSLLLMQILGLLGVVYFLMKGMEISRNKIEPAREMDLEQYGQTTVLFSDDNHSDF
SQNLTKILDIMLKAKKQKLQEVKGDLQTYLQNSQECIYSCIIAISFRDQKVVTLWFNNMA
YHSPPLSLAVFDNLLFMALSGPDASITVSNKPQPQNIVSKKLEGRKMTGQQVALNLFFGV
SIFVSGFCLLTVTERINKAKHIQFVSGVSAINFWLSALLWDFMIYFIACCLLLVVFLLSG
LDELTKNYRFLDTLIIFMLFGWSVIPFTYLISFLFSSHTSAYIKLVMLNYCAGVFGIVLE
VVVTTTSGPDSESLLLDSLMVLPIYNFGMSISKYFHNQNIRLLCSSKDVPAFVNCSKAIT
QMNVYGLEKDAIGKFLIAMAVLGFIFFVLIFLMETTSWKVKTFVFHYIFFGIYKKFNKEI
VSTELSGESEDDDVQYERNRILEQPQESLNFTVLIKELTKIYFTCPAVLAVRNISLGIQK
KECFGLLGLNGAGKSTTFKILTGEETATSGDVFIENLSITKNLLEVRSKIGYCPQFDALL
DYMTAREIMVMYARLWGVPETQITQYVNKLLQSLNLELYADTFIYTYSGGNKRRLSNAIA
LMGKPSVIFLDEPSTGMDPVARRLLWNTVTRARESGKVIIITSHSMEECDALCTRLAIMV
KGKFMCLGSPQHLKNKFGNVYILKVKFKMDTDENELEDFKTYIATVFPGSELKQENQGIL
NYYIPREDNGWGKVFGILEEVKEKFSLEDYSISQITLEQVFLNFANPENKGGD
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atggacttgttgtggctcaaccaatttgcagtcctcctctggaaaaatttcgttttaaag
aaaaggaagatattttctttagttgtggaaatctgcatgacagtcttcttctctctattg
attttgctttatcgcagcaatataaagaagacgtttcagaatgtcacggttttccatcct
ttgcttttgatgtcctcgcctgatttcatgcttaatgggaaccttgaatatgaattagct
tatgtgccttctaaaagtgatgtggtaaaaaatattactgagacggtgaaaaacacatta
aatatcaattttacagttcgaggcttttcttcagaagcacagtttgagaagtatgttcag
tatgaaaagaagcctatggttcgtgtggtggctgctgttgtatttgatcatgacttcaaa
aatagcgatgaccgtttgccacttcaggtaaaatatcatctgcgttttggtgcaggtact
gagagaacttcggatttgctaagctccttagtagatactggatggaatacacacattctt
tttccggaggtacctcctgtaggacccaggaacccacttaagaatgatgggggagatcct
gggtacatcaaagaagggttcctgcttttgcagcatatcatagaccaggccatcatgaca
taccataacggcgaagctgcaaaacaaatgttaaatggtgccatcattttggttaatagg
tttccataccctgcttattatatggatcctttttggtttaatttttcagatctcttccct
ttgatagttatacttgcattttctctaactgaacttaccctcatcaggaccattgtttca
gaaaaggaaaagagattaaaggagtaccagctcatgataggactcagtaatgctatgctc
tgggcttcctattttgtctcattctttctgatgtttttaattatcatctgtttactgtgc
gtgattttatttgtcaagattgcacctgatgtagtcatccagtacagtgacccgtctctt
gtcttcgtctttttcctgtgctttgtcatcacctctatatccttcggctttctgatttcc
acactctttgatacagctactttggctgtgtctgttggaggtttcctctattttctcacc
ttctttccatatgtatttgtgcaaaccatgtatacacaaatgcacctcaccgagaagctg
gttttctgtctcctttcaaatgttgcagtagctttgggggttaatattataagccagatg
gaaatgaagcaatatggtgtccagtgggataacatccagtcaccagtgagcccagatgat
gatcttagttttattcatattatgggaatgcttttatttgatgcttccttgtttggcctt
atggcctggtatatggatgctgtctttccagggagatatggtgtgcccaagccatggtat
ttctttgtgcagaaatcctactggtttggtaaagctttaagcgttaagtataaagaagat
aaacaaattattgacacaattagaagtgattattttgaaaaagagcctgttgatttggtg
gctggtattaggatccaacatctatacaaggaattcacagtggagaaggataccatcgta
gcagtaaaaaacttaacttttaatgtatatgagggtcaaatcactgttcttctgggacct
aatggagcaggaaagactaccaccttatcgattcttacaggtttgattcttcctacaagt
ggaaaggtgtatattagtggatatgatatctcaaaagacatggttcacatcaggaatgac
ttgggcttttgcccccaggatgacatattgttttcagaattgacagtatcagaacatctc
tatttctactgtgtgataaaaggagtacctccagagatacgtgccacagaagttaataac
gtgctgacttcttttgatctgctggaaaagcgtgatgcacttgcacagtcactgagtgga
ggaatgaagcgcaaactctctattattatagcacttataggaggctccaaggtggtgata
cttgatgagccaacatctggcatggacccagtttcaagaagattcacctggagtgtcctt
cagcagtatagatatgatcgtaccatcttactgaccacccatcacatggatgaagctgat
gtcctgggtgaccgtatagccatcatggtcaagggatcccttcagtgttgtggctcttca
attttcctgaaaagaatatatggtgtgggataccacataattatggtgaaggaacctcat
tgtaatgttgaagaaattattgaagtgattaatcaacatatacctgaggccagattggag
agcgatgttgcagctgaattatcatttatcttacccaaaaagtacacacacaggtttaaa
gacctacttactgatctggaaaacaggcagaaagagctgggcattagtagctttggtgtc
tcaattactaccatggaagaagttttccttagggtcattagggaggatgaggaagctttc
cagaccccatccctaaaggagaaaaacagaaaagaagacatgaaccagaatatgaatgct
tctggaagttttgagagatcacactctcctactgcaagtgaacactctaatattaggttt
aatactgggtggtctcttcactgtcagcagttctatgccatgttcataaagagggctatg
ttctcctggcgcaactggagtttgttgttgatgcagatactgggacttctgggtgttgtt
tattttctcatgaaaggaatggagatttcaagaaataaaattgaacctgccagggaaatg
gatttggaacaatatggtcaaaccactgtgcttttctcagatgataaccattctgatttt
tctcagaatttaacaaaaattcttgatatcatgctaaaggctaagaaacaaaaacttcag
gaagtgaaaggtgacttacagacatacttgcagaacagtcaagaatgcatttactcgtgc
attatcgcaatttcctttagggatcagaaggtagttaccctttggttcaacaacatggca
taccattcaccaccattatccctggcagtatttgacaatcttctttttatggcactttct
ggacctgatgcttcaattacagtctccaacaaacctcagcctcaaaatattgtttctaaa
aaacttgagggaagaaaaatgacaggacagcaagtagccttgaatttgttttttggtgtg
agtatttttgtcagtggcttttgtcttctgacagtgactgagagaatcaataaggcaaag
cacatccagtttgtgagtggggtctctgctattaatttctggctctctgctctgctgtgg
gacttcatgatctacttcattgcctgctgcttactcttggtggtgttcctgttatctgga
ttggatgaactgaccaagaattaccgctttctagacacattgatcatcttcatgctgttt
ggctggtctgtcattcccttcacgtacctgataagtttccttttttctagtcataccagt
gcctacatcaagcttgtgatgttaaactactgtgcaggagttttcggcatagtactggag
gtagtagtaactacaacgtcaggacctgattctgagagccttctacttgattcattgatg
gtgttacccatatataactttgggatgagcatcagtaaatattttcataaccaaaatata
aggctgctgtgttcctcaaaagacgttcctgccttcgtaaattgtagtaaagcaataact
cagatgaatgtatatggtttggaaaaagatgcaataggaaaatttttaattgcgatggct
gttttgggatttattttcttcgtcttgattttccttatggagaccacctcatggaaagtg
aaaacctttgtgtttcactatattttctttggtatctacaagaaatttaataaggaaata
gtgtccacagaattatctggggaatctgaagatgatgatgtgcaatatgagagaaacaga
atcctggagcaacctcaggaatccctgaatttcacagtacttattaaggaactcacaaag
atatactttacatgtccagctgttttggctgtcagaaatatctcccttggaatccaaaag
aaggaatgctttggattgcttggattaaatggagctggaaaaagtactaccttcaaaata
ttgactggagaagagactgctacctctggggatgtgtttattgagaacttaagtatcacc
aaaaatcttctagaggtaaggtcaaaaattggctattgtccacagtttgatgctttgctg
gattacatgactgcccgggaaattatggtcatgtatgccaggttgtggggggttcctgag
acccagattacacaatatgtgaataaattgttgcagtcactgaatctggaactctatgct
gacacgtttatttacacttacagtggaggaaacaaacgtagactgagtaatgccattgcc
ctaatgggaaagccctcagtcatcttcctggatgagccatcaaccggcatggacccagtg
gccaggcgtctgctctggaacacagtaacaagggcacgtgaaagtggcaaagtcatcatc
attacctctcacagcatggaagaatgtgatgccctctgtaccaggctggctatcatggtg
aagggaaaattcatgtgcctgggtagccctcagcacctcaagaacaagtttggcaatgtt
tacattctgaaagttaagttcaagatggatacagatgagaatgaattagaggattttaaa
acctacattgcaacagttttcccaggtagtgaattaaaacaggagaatcaagggattctt
aactactacattcccagagaggacaatggctggggaaaggtgtttggtattttggaggaa
gttaaagagaaattcagtttagaagactattccatcagtcagataacactggaacaagtc
ttcctgaactttgctaacccagagaacaaaggaggtgactga
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integrated database retrieval system
