Lutra lutra (Eurasian river otter): 125091259
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Entry
125091259 CDS
T08100
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K11659
histone-binding protein RBBP7
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03082
ATP-dependent chromatin remodeling
llv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125091259
03083 Polycomb repressive complex
125091259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125091259
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
125091259
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
125091259
PRC2.2
125091259
Chromatin remodeling factors
NuRD complex
125091259
NuRF complex
125091259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_1st
WD40_RFWD3
Beta-prop_WDR19_1st
WD_LRWD1
ANAPC4_WD40
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
MIOS_WD40
Beta-prop_DCAF4
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
125091259
NCBI-ProteinID:
XP_047570651
LinkDB
All DBs
Position
X:86632582..86654811
Genome browser
AA seq
469 aa
AA seq
DB search
MAADAGFVEAEAAPGGGWRERAEGLLLHVDSSPRVGRGASVQTGRHLRTVFEDTVEERVI
NEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQN
HLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNP
HIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSAS
DDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDT
RSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK
DEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKI
SDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSELEGQGS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgacgctggcttcgtggaagcggaggccgctcctggtgggggatggagggag
cgggccgaggggttgctgctacacgtggattcgtctccccgcgtaggtcgtggagcctct
gtacagacgggtcgtcatcttagaacagtgtttgaagatactgtggaggagcgtgtcatc
aatgaagaatataaaatctggaagaagaatacaccgtttctgtatgacctggttatgacc
catgctcttcagtggccgagtcttaccgttcagtggcttcctgaagtgactaaaccggaa
ggaaaggattatgcccttcattggctagtgctggggactcacacatctgatgagcagaat
catctcgtggttgctcgagtccatattccgaatgatgatgcacagtttgatgcttcccac
tgtgacagtgagaagggtgaatttggtggctttggttctgtaacaggaaaaattgaatgt
gaaattaaaattaaccatgaaggagaagtaaaccgtgctcgttacatgccgcagaatcct
cacatcattgctaccaaaactccatcttctgatgtgctggtttttgactacacaaagcac
cctgctaaaccagacccaagtggagaatgtaatcctgatcttaggttaagaggccaccaa
aaggaaggctatggtctttcctggaattcgaacttgagtggacatctcctaagtgcatca
gacgatcatactgtctgtctgtgggatataaacgcaggaccaaaggaaggcaagattgtg
gatgctaaagccatcttcactggccactcggctgttgtagaggatgtggcctggcatctg
ctccacgagtccttatttggatcagttgctgatgatcagaaacttatgatatgggacacc
aggtccaataccacctccaagccgagccacctggtggacgcgcacactgccgaggtcaac
tgcctgtcgttcaacccctacagcgagttcattcttgcaactggctctgcagataagact
gtagctttatgggatctgcgtaatttaaagttaaaactccatacctttgaatctcataaa
gatgaaattttccaggtccactggtctccacataacgaaactattctggcttcaagtggt
actgatcgccgcctgaacgtgtgggatttaagcaaaattggagaagaacaatcagcagaa
gacgccgaagatgggcctccagaactcctgtttattcatggaggacacaccgccaagata
tcagattttagttggaaccccaatgagccttgggtcatctgctcggtgtctgaggataac
atcatgcagatatggcaaatggctgaaaatatttacaatgatgaagagtcagatgtcaca
acatcggaactggaggggcaaggatcttaa
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