Lutra lutra (Eurasian river otter): 125091360
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Entry
125091360 CDS
T08100
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03013
Nucleocytoplasmic transport
llv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125091360
03015 mRNA surveillance pathway
125091360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125091360
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125091360
mRNA cycle factors
P-body specific factors
125091360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
125091360
NCBI-ProteinID:
XP_047570883
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All DBs
Position
X:27627510..27644854
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AA seq
485 aa
AA seq
DB search
MKEEKEHRPKEKRVTLLTPPGATGSGGGASGDTAKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRVPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREK
AKKLDKENLNDERASGQSCTLPKRSDGEPKDEKPKRPEEESVRDYRERERDYERDQERIL
RERERERLKRQEEERRRQKERYEKEKAFKRKEEELKKEKEALRDKGKKTESTESVSSSEK
TEKKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAVEKKQESGISHRK
EGGEE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagaaggagcataggcctaaagagaagcgagtaaccctgttgactcccccg
ggggccacaggcagcggcggtggggcttcgggcgacaccgccaaaggggaagataagcag
gatcgaaataaggagaagaaagaggcgctgagcaaggtggtaattcggagattacctccc
actttgaccaaggagcaacttcaggaacatcttcagcctatgccggagcatgattatttt
gaatttttttctaatgatactagtctgtatcctcatatgtatgccagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaggaatatcctgctatagtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagataccaaagtcgggactatcgatgatgatccagaatat
agaaaatttttggaaagttatgctgcagataatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagcaaaaaatagagaattaatagctaaaaagacaaccccactt
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaaaagagaagaaaggaggagg
cgagaaatagaaaggaaaagacaaagggaagaagagaggaggaaatggaaagaagaagaa
aaacgaaaaaggaaagacatagaaaagctgaagaagatagacagagttccagaaagggac
aaattaaaggatgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctactcaagaagccagaaaaaggagatgaaaaagaattagataaaagagaaaaa
gccaagaaactggacaaagagaatctgaatgatgaaagagccagtgggcagagttgtacc
ctgcccaagcgctctgatggtgaacctaaagatgaaaagcctaagaggcccgaagaggag
agtgtccgagactaccgggagcgggagcgggactacgagcgagaccaagagcgcatcctg
cgggagagggagagggagaggctgaagcggcaggaagaggagcgccgcaggcagaaggag
cgctatgagaaggagaaggcttttaaaagaaaggaagaagaattgaaaaaagagaaagaa
gcccttcgggataaaggaaagaagactgaaagcacagaatcagtaagcagctcagaaaaa
actgaaaagaaagaggaagtggttaagagagatcgcataagaaacaaggatcgcccagca
atgcagctttaccaaccaggagctcgaagccgaaatcgactctgtccgcctgatgacagc
accaagtctggagattcagcagtagaaaaaaagcaggaaagtggtattagccatagaaaa
gaaggaggagaggagtga
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