Lutra lutra (Eurasian river otter): 125091464
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Entry
125091464 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03008
Ribosome biogenesis in eukaryotes
llv03013
Nucleocytoplasmic transport
llv03015
mRNA surveillance pathway
llv05014
Amyotrophic lateral sclerosis
llv05164
Influenza A
llv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125091464
03015 mRNA surveillance pathway
125091464
03008 Ribosome biogenesis in eukaryotes
125091464
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125091464
05168 Herpes simplex virus 1 infection
125091464
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125091464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125091464
03009 Ribosome biogenesis [BR:
llv03009
]
125091464
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125091464
mRNA cycle factors
Stress granule specific factors
125091464
Ribosome biogenesis [BR:
llv03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
125091464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
Tap-RNA_bind
NXF_NTF2
NTF2
TSP_Ig-like
Motif
Other DBs
NCBI-GeneID:
125091464
NCBI-ProteinID:
XP_047571064
LinkDB
All DBs
Position
X:complement(42517477..42524583)
Genome browser
AA seq
425 aa
AA seq
DB search
MSSVKWHNEFQDRTFQERDMENRQDGSSGGWFRITISYGIKYNKKWLINSIQSHCSVPFT
MVNFHYFKDQAQFFIQDVSAASALNDTNYKICDEKNQKLSMHVNPSAVPYSIQNKLEPEE
MEQLKVMKTQGQLYDISHKALDLHKLHFDPGLMDHDIDIILNXRNYMAATLQIIKENFPE
LLSLNLCKNKLYQLDGLSDILQMVPTVNILNLSKNELGRENQIKVGVDIWELGKMKGLKL
EELWLKENPLCGIFPNQSVDGQVLPTRTVICIEASNALNSLEEYFKDSRDIKKVKNPNLQ
VQLLKHAKYDIVDCLNMLPKTQHGLNSYVVDLSIQMETMLCFYVNGVFKEVERNSQGSVH
AFTLTFILTSDSNSSLCIVNDELIVGNARTKETQNAISIPVPSPSASCMPIFSQKQQEMM
QAFSA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgtgaaatggcataatgaattccaagacagaacatttcaagagagggatatg
gagaacagacaggatggaagctcagggggctggttcaggatcacaatttcatatggaata
aagtataacaagaaatggctaataaattcaatccaaagccattgcagtgtcccctttact
atggtcaatttccattactttaaagaccaagcccagttctttattcaggatgttagtgct
gcctctgcattgaatgataccaactacaagatttgtgatgagaaaaatcaaaagctatct
atgcatgtaaatccctctgctgtaccctactctatacagaataaattggagccagaagaa
atggagcagctaaaggtaatgaagactcaaggtcaattgtatgatatctcccataaagct
cttgacctccataaactccactttgacccaggtttgatggaccatgatatagatataatc
ctgaattgaagaaactacatggctgccaccctgcagataatcaaagagaatttccccgaa
cttttgtccttgaacttgtgcaagaacaaactttaccagctggatggcttgtctgacatt
ctacagatggtccccacagtaaatatcctgaacctctccaaaaatgagttgggaagagag
aaccagattaaagttggggttgacatctgggagttaggcaagatgaaagggctgaagctt
gaagagctgtggctaaaagagaaccctctgtgtggcatcttcccaaaccagtctgtagat
ggccaggtgttaccaacaagaactgtaatttgcattgaagcctccaatgccctaaacagt
ttggaagaatacttcaaggacagcagggatattaagaaggtcaagaacccaaacctgcag
gttcagctgctaaaacatgcaaaatatgacattgttgactgcctcaatatgttgcctaaa
actcagcatggccttaactcctatgtggtagacctgagcatccagatggaaacaatgctc
tgtttttatgtcaatggggtttttaaggaagtagaaagaaattctcaaggttctgtccat
gctttcaccctgaccttcatcttgacttctgatagcaattccagtctatgcattgtgaat
gatgaactgattgtggggaatgccaggaccaaagaaactcagaatgccatctccattcca
gttccctcaccctctgcgagctgcatgcctatcttctcccagaaacagcaggaaatgatg
caggctttctctgcttag
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