Lutra lutra (Eurasian river otter): 125091651
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Entry
125091651 CDS
T08100
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04622
RIG-I-like receptor signaling pathway
llv05161
Hepatitis B
llv05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
125091651
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
125091651
09172 Infectious disease: viral
05161 Hepatitis B
125091651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125091651
03041 Spliceosome [BR:
llv03041
]
125091651
03036 Chromosome and associated proteins [BR:
llv03036
]
125091651
Enzymes [BR:
llv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125091651
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125091651
mRNA cycle factors
Common to processing body (P body) and stress granule
125091651
Spliceosome [BR:
llv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125091651
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125091651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125091651
NCBI-ProteinID:
XP_047571339
LinkDB
All DBs
Position
X:complement(63163142..63179760)
Genome browser
AA seq
662 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW
SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRGRSDYDGIGSRGDRSGFGKFE
RGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
WVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGAR
DYRQSSGASSSSFSSSRASSSRSGGGGHGSSRGFGGGGYGGFYNSDGYGGNYNSQGVDWW
GN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgctcgggctggaccagcagtttgctggcctagac
ctgaactcttccgataatcagagtggaggaagtacagcaagcaagggacgctatattcct
cctcacttaaggaacagagaagctactaaaggattctacgacaaagacagttcagggtgg
agttctagtaaagataaggatgcatacagcagttttggatctcgtagtgattccagaggg
aaatctagtttctttagtgatcgtggaagtggatcaaggggaaggtttgacgatcgtgga
cggagtgactatgatggtatcggcagccgtggtgacagaagtggttttggcaaatttgaa
cgtggtggaaatagtcgttggtgtgacaaatcagatgaagatgattggtcaaaaccactc
ccaccaagtgaacgcttggaacaggaactcttttctggaggaaacactgggattaacttt
gagaaatatgacgacattccagttgaggcaacaggcaacaactgtcctccacatattgaa
agtttcagtgatgttgagatgggagaaattattatgggaaacattgagcttactcgttat
actcgcccaactccagtgcaaaagcatgctattcctattatcaaagagaaaagagacttg
atggcttgtgctcaaacagggtctggaaaaaccgcagcgtttctcttacccatcttgagt
cagatttatgcagatggtccaggagaggctttgagggccatgaaggaaaatggaaggtat
gggcgtcgcaagcaatacccaatctccttggtattagcaccaactagagaattggcagta
cagatatatgaggaagccaggaaattttcataccgatccagagttcgaccttgcgtggtt
tatggtggtgctgatattggtcaacagatccgagacttagagcgtggatgccacttgtta
gtagctactccaggtcgtctagtggatatgatggaaagaggaaagattggattagacttt
tgcaaatacttggtgttagatgaagctgataggatgttggatatgggttttgaacctcag
atacgtaggatagttgaacaagatactatgccaccaaagggtgtccgccacactatgatg
tttagtgctactttccctaaggaaatacagatgctggcccgtgatttcttggatgagtat
atctttttagctgtaggaagagttggctctacctctgagaatattacacagaaagtcgtt
tgggtggaagagtccgacaaacggtcatttttgcttgatctcctaaatgcaacaggcaag
gattcactgaccttagtgttcgtggagaccaaaaagggtgcagattctctggaagatttc
ttgtaccatgaaggatatgcttgtaccagtatccatggagaccgatctcagagagataga
gaagaggcccttcaccagttccgctcaggaaaaagcccaattctagtggctacagcagta
gcagcaagaggactggatatttcaaatgtgaaacatgttatcaattttgacttgccaagt
gatatcgaggaatacgtacatcgcattggccgtacaggacgtgtagggaaccttggcctt
gccacctcgttctttaatgagaggaatataaacattaccaaggatttgttggatcttctt
gttgaagctaaacaagaagtgccatcttggttagaaaacatggcttatgaacaccactac
aagggaagcagtcgtggacgatcgaagagtagcagattcagtggaggatttggtgcccga
gactatcgacaaagcagcggtgccagcagttccagcttcagcagcagccgcgcaagcagc
agccgcagtggaggcggtggccacggcagcagcagagggtttggtggaggtggctatgga
ggcttttacaacagtgatggatatggaggaaattataactcccagggggttgactggtgg
ggtaactga
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