Lutra lutra (Eurasian river otter): 125091921
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Entry
125091921 CDS
T08100
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125091921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125091921
Enzymes [BR:
llv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125091921
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125091921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
zf-RING_2
Pur_ac_phosph_N
zf-RING_5
zf-C3HC4_2
U-box
Motif
Other DBs
NCBI-GeneID:
125091921
NCBI-ProteinID:
XP_047572018
LinkDB
All DBs
Position
X:92216739..92557000
Genome browser
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFSCAHRILVSHCATNESVESITAFQCPTCR
HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTSLIKRNTELETL
LAKLIQTCQHVEVNASRQEAKLMEECDLLIEIIQQRRQIIGTKIKEGKVMRLRKLAQQIA
NCKQCIERSASLISQAEHSLKENDHARFLQTAKSITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDESSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWALCRCHNNWVVRHNSKETPIEPAPH
LRRVGILLDYDNGSIAFYDALNSIHLYTFDITFSQPVCPTFTVWNKCLTIITGLPIPDHL
DCTEQLP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgccctatttgtctggagctctttgaggaccct
ctcctactgccctgtgcacacagcctctgcttcagctgcgcccaccgcatcctggtgtca
cactgcgccaccaacgagtctgtggagtccatcaccgccttccagtgccccacctgccga
catgtcatcacgctcagccagcgaggtctagacggactcaagcgcaacgtcaccctgcag
aacatcatcgacaggttccagaaagcctccgtaagcgggcccaactcccccagcgagacc
cgccgggagcgggccttcgacgccaacaccatgacctccgccgagaaagttctctgccag
ttctgtgaccaggatcctgcccaggacgctgtgaagacctgtgtcacttgtgaagtgtcc
tactgtgatgagtgcctgaaagccactcacccaaataagaagccctttacgggccatcgt
ctgattgagccaattccggactcacacatccgggggctgatgtgcctggagcacgaggat
gagaaggtgaatatgtactgtgtgaccgatgaccagttaatctgtgccttgtgtaaactg
gttgggcggcaccgagatcatcaggtggcagctttgagtgagcgctatgacaaattgaag
caaaacttagagagtaacctcaccagccttatcaagaggaacacggaactagagaccctt
ttggctaaactcatccagacctgtcagcatgtggaggtcaatgcatcacgtcaagaagcc
aaattgatggaggagtgtgatcttctcattgagatcattcagcagagacgacagattatt
ggaaccaagatcaaagaagggaaggtgatgaggcttcgcaaactggctcagcagatagcg
aactgcaagcagtgcatcgagcggtcggcctccctcatctcccaggcggagcactctctg
aaggagaacgatcacgcgcgcttcctgcagacggccaagagcatcaccgagagagtctcc
atggcgactgcatcctcccaggtcctaattcctgaaatcaacctcaatgacacatttgac
accttcgccttagatttttcccgagagaagaaattgctagaatgtctggattaccttaca
gctcccaaccctcctacaattagagaagagctctgcaccgcttcctacgacaccatcacc
gttcactggacctccgatgatgaattcagcgtggtttcctatgagctccagtacaccata
ttcaccggacaagccaatgttgttagtctgtgtaactcggccgacagctggatgatcgtg
cccaacatcaagcagaaccactacacagtccatggtctgcagagtggcaccaagtacatc
ttcattgtcaaggccatcaaccaggcgggtagccgcagcagtgagcctgggaagctgaag
acaaacagccagccatttaaactggaccccaagtctgcacatcgaaagctgaaggtgtcc
cacgataacttgacggtagaacgtgatgagtcatcctctaaaaagagccacacgcccgaa
cgcttcaccagccaagggagctatggtgtagctggaaatgtgttcattgatagcggtcgg
cattactgggaagtggtcataagtgggagcacatggtatgccattggccttgcttacaaa
tcggccccgaagcacgagtggattggaaagaactctgcttcctgggcgctgtgccgctgt
cacaataactgggtggtaagacacaatagcaaggaaacccccatcgagccagccccccac
ctccggcgcgtcggcatcctgctggactatgacaatggttccatcgccttctacgatgct
ttgaactccatccacctctacaccttcgacatcaccttctcgcagcctgtgtgccccacc
ttcacagtgtggaacaagtgcttgaccattataactggccttcccatcccagaccatctg
gactgcacagagcagctgccgtga
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