Lutra lutra (Eurasian river otter): 125092256
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Entry
125092256 CDS
T08100
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3B
KO
K03267
peptide chain release factor subunit 3
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125092256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125092256
03012 Translation factors [BR:
llv03012
]
125092256
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125092256
Translation factors [BR:
llv03012
]
Eukaryotic type
Release factors
125092256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
125092256
NCBI-ProteinID:
XP_047572591
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Position
X:complement(54722789..54725324)
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AA seq
627 aa
AA seq
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MDPGSSSSDSAPDCWDQVDMEAPGSAPSGDQASSALAEAQQEHLSSAFSRQLNVNAKPFV
PNVHAAEFVPSFLRGPAQLQTPPADITNIDETCTGAGDLQGKKLGRGAPVEHSKEEQLVL
HEGSNSAVTMELSEPVVENGEVEMILEESWEHNKEVSEAEPGGSSLGDSGPPEESGQEIM
EKEEMRKSKSVFVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYERE
AKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGG
ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLVVLINKMDDPTVNWSSE
RYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDNMP
NFNRSIDGPVRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGILSDDAE
TDYVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDVQIVIIEHKSIICPGYNA
VLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFP
QMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggcagcagcagcagcgactccgcgcccgactgctgggaccaggtggacatg
gaagccccgggttcggccccgagcggagaccaagcctcctcggcgcttgccgaggcccag
caggagcatctcagctcggccttcagccgtcagctcaacgtcaatgccaaacccttcgtg
cctaacgtacacgccgcggagttcgtgccgtcctttctgcggggcccggcccagctgcaa
acccccccggccgacatcaccaacatcgatgaaacctgcaccggcgcgggcgaccttcaa
ggtaaaaagctgggacggggggcacctgtggaacattccaaagaggaacagttagtgttg
catgaaggttccaattcagccgttaccatggaactttcagaacctgttgtagaaaatgga
gaggtggagatgatcctagaagagtcatgggagcacaataaagaagtaagtgaagctgag
ccagggggtagttccttgggagattcagggcccccagaagaaagtggccaggaaataatg
gagaaagaggaaatgagaaaatctaaatctgtgttcgtgccctcaggtgctcctaaaaaa
gagcacgtaaatgtggtgttcattgggcatgtagatgctggcaagtcaaccattggagga
caaataatgtttttgacaggaatggttgacaaaaggacacttgagaaatatgagagagaa
gctaaagaaaaaaacagagaaacttggtatttgtcctgggccttagatacaaatcaggaa
gaacgagacaagggtaaaacagtagaagtgggtcgtgcctatttcgaaacagaaaagaaa
catttcaccattttagatgctcctggccacaagagttttgtcccaaatatgattggtggt
gcttctcaagctgatctggctgtactagtaatctctgccaggaaaggagaatttgaaact
ggatttgagaaaggtggacagacaagagaacatgcgatgttggcaaaaacagcaggggta
aaacatttagtagtgcttattaataagatggatgatcccacagttaattggagcagcgag
agatatgaagaatgtaaagaaaaactggtgccctttttgaaaaaagttggctttagtccc
aaaaaggacattcactttatgccctgctctgggctgacaggggcaaatattaaagagcaa
tcagatttttgcccttggtacactggattaccatttattccgtatttggataatatgcca
aacttcaacagatcaattgatggaccagttagactgccaattgtggataagtacaaggat
atgggcaccgtggtcctgggaaagctggaatcaggatccatttttaagggccagcagctt
gtgatgatgccaaacaagcacaatgtggaagttcttggaattctttctgatgatgctgaa
actgattatgtagccccaggtgaaaatcttaaaatcagactgaagggaattgaagaagaa
gagattcttccaggattcatactttgtgaccctaataatctgtgccattctggacgtacc
tttgacgttcagatagtgattattgagcacaagtccatcatctgcccaggctataatgcg
gtgctgcacattcatacttgtattgaggaagttgagataacagccttaatctccttggta
gacaaaaagtcaggagagaaaagtaagacacggccccgcttcgtgaaacaagatcaagtg
tgtattgcccgtttaaggacagcagggactatctgccttgaaacattcaaagattttcct
cagatgggtcgttttactttaagagatgagggtaagaccattgcgattggaaaagttctg
aaactggtcccagagaaggactaa
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