Lutra lutra (Eurasian river otter): 125092391
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Entry
125092391 CDS
T08100
Name
(RefSeq) Werner syndrome ATP-dependent helicase-like isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llv03032
]
125092391
03400 DNA repair and recombination proteins [BR:
llv03400
]
125092391
Enzymes [BR:
llv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125092391
DNA replication proteins [BR:
llv03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125092391
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
125092391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
125092391
NCBI-ProteinID:
XP_047572793
LinkDB
All DBs
Position
2:29028179..29171160
Genome browser
AA seq
1404 aa
AA seq
DB search
MNEKKLETTLQQRKLPEWMSGQNETCPAVEGKASIQKSVFEDDLPFLEFTGSIVYSYEAS
DCSFLSEDISTDLCTGGVVGFDMEWPPAYSKGKQSRVALIQLCVSESKCYLFHISSMSVF
PQGLKMLLENEAIKKAGVGIKGDQRKLLCDFDIDLKNFVELTDVANEKLKCTEIWSLNGL
VKHLFGKQLLKDRSIRCSNWSDFPLTEDQKLYAATDAYAGFIIYQKLEILGDAVQRFAIN
KKEEEMLPSDVKKQLTSISENMMDLAKHLPDTWKKVEDPQRISILLRDISENLYSLRKMI
LDSAETVQLLPLEDPAADRVQHKQIRKQKIFTEVEDDLWDTTLDNLIIHDEGNVLRNEVK
QEDGLEAGLEEGNKLKENTERICLTSLDITECDLQILEQQAQEKFHNDVTCKSPEHLSSK
DKEEDLSYVIESDEDLEMEMIKSLENLNTGTADPVHSKCRDMERDPDVPFEDDEDEIEAI
EEEEEEGADHSLPGPNASQINFLKIYFGHSSFKPVQWKVIHSVLEERRDNVVVMATGYGK
SLCFQYPAVYSGRIGLVISPLISLMEDQVLQLKMSNIPACFLGSAQSKNVLEDIKSGKYR
IVYLTPEFCSGNLSLLQQLQANIGITLIAVDEAHCISEWGHDFRISFRTLGSLKAILPSV
PIVALTATASSSIREDIVRCLNLKNPQITCTGFDRPNLYLEVGRKTGNIIQDLVQFLIRK
TNTTWEFEGPTIIYCPSRKMTEQVTAELKKLNLACGTYHAGLSVKSRREVHHSFMRDEIQ
CVIATIAFGMGINKADIRKVIHYGAPKEMESYYQEIGRAGRDGLQSSCHVLWAPADINLN
RHLLSEIPNEKFRLYKLKMMAKMEKYLHSRRCRRKLILSHFEDKQLRKASVGIMGTEKCC
DNCRSRLDHCYAIDDSDETSKDFGPQAFQLLSAVEILGEKFGIGLPILFLQGSSSQRLPD
QYRRHNLFGSGKNQTESWWKALSHQLMAEGFLVEVSGKRRFVRICTLTEKGRCWLHEAGT
ESPKKLILQASEELCPRVFLLPSSKTVPPGVEQGSYNQVPAESTTDKKQPNLEKMYSYKA
TDKISSGRNIPKKSIMVRSPGKPHKSSEPVISAQEQETETVLYGKLVEARQKQASKMDVP
PAILATNKILLDMAKMRPTTFENVKRIDGVSEGKANMLTPLLEVIKDFCQINNTQTDLFS
RTKPQEEQRNSMVAKNEACSLSQPVAITYYLFQEKKMSLISISKERVMPVTMVGMHLTQA
MKAGCPLDTERAGLTPEVQKIIADVIRNPPINSDINEVKLIRKLVPENIDTYLIHMALEI
LGKDCDNRLLDQLSCTSNRKRYFPNSEESCSSSKRSREEVGANTKPASVTSKRKLPEWFA
KGSETSADTSKKSMARTKKKGLFS
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaaaaagttggaaacaactctacagcagcggaagcttcctgaatggatgtct
gggcagaatgagacctgtcctgcagtagaaggaaaggcatctattcagaagagtgttttt
gaagatgacctccctttcttagaattcactggatcaattgtttatagttatgaagctagt
gattgttcttttctatcagaagatattagcacggatctgtgtactggaggtgtggtagga
tttgacatggaatggccaccagcgtacagtaaagggaaacagagcagagttgcactgatt
cagttatgtgtgtcagagagcaaatgttacttgtttcatatttcttctatgtcagttttt
cctcagggattaaaaatgttgcttgaaaatgaagcaattaaaaaagcaggtgtgggaatc
aaaggagatcagcggaagcttctatgtgactttgacatcgatttgaagaattttgtggag
ctgacagatgttgccaatgaaaagctgaaatgtacagagatctggagcctgaatggtttg
gttaaacatctcttcggcaaacagcttctgaaagacaggtctatccgctgtagcaattgg
agtgactttcctctcactgaggatcagaaactgtatgcagccactgatgcatatgctggt
ttcatcatttatcaaaaattagagattttaggtgatgctgtgcaaaggtttgctataaat
aaaaaagaggaggaaatgctacctagtgatgtgaagaaacaactgacatcaatctctgag
aatatgatggatctggctaagcatctccctgacacttggaaaaaagtggaagatccacag
aggatttctatattattacgtgatatttcagaaaatctgtattcattgaggaagatgata
cttgattctgccgagactgttcagttattaccattggaagatccagctgctgacagagta
caacataaacaaattagaaaacagaaaatttttactgaagttgaagatgatctatgggac
acaacacttgataatttaattatacatgatgaaggaaatgtacttcgaaatgaagtgaaa
caagaagatgggcttgaagctggattagaagaaggcaataagttgaaagaaaacacagaa
agaatttgtttgacgtcattagatattacagaatgtgacctccaaattttggaacagcag
gctcaggaaaaatttcataatgatgtgacttgcaaatctcctgagcatttatcttctaag
gataaagaagaggatctatcttatgtaattgaaagtgatgaagatttagaaatggagatg
attaagtctttagaaaacctaaatactggcacggcagatccagttcattcaaaatgcaga
gacatggaaagagatccggatgttccttttgaagatgacgaagatgagattgaagctatt
gaagaagaagaagaggagggtgcagaccattcattaccaggacctaatgcaagccaaatt
aatttcctcaagatctattttggccattccagttttaagccggttcagtggaaggtgatt
cattctgttttggaagaaaggagagataatgttgttgtgatggcaactggatatggaaag
agtttgtgcttccagtaccccgctgtgtattcaggcaggattggccttgtcatctctcct
cttatttctttgatggaagaccaagtcctccagcttaaaatgtccaacattccagcttgt
tttctgggatcagcacagtcaaaaaatgttctagaagatattaaatcaggcaaataccgc
attgtatacctaactccagaattctgttcaggtaacttgagcctactccagcaacttcag
gctaatattggtatcacccttattgctgtggatgaggctcactgtatttctgaatgggga
catgactttagaatttcgttccggactttgggctccctaaaggcaatactcccatcggtt
ccgattgttgcacttactgccactgcaagttcttcaatccgggaagacattgtgcgctgc
ttaaacctgaagaatcctcagattacctgtactggttttgatcgaccaaacttgtattta
gaagttgggcgaaaaacaggaaacatcattcaggatcttgtccaatttcttatccgaaag
acaaataccacctgggaatttgagggtccaactatcatctattgtccttccagaaaaatg
acagaacaagttacagctgaacttaagaaactgaacttagcctgtggaacataccatgca
ggcctgagtgttaaatcaaggagagaggttcatcatagtttcatgagagatgaaattcag
tgtgtcatagctaccatagcttttggaatgggcattaataaagccgacattcgcaaagtc
attcattatggtgctcctaaagaaatggaatcgtattaccaggagattgggagagctggc
cgtgatggacttcagagttcttgtcatgtactgtgggctccagcagacattaacttaaac
aggcatctccttagtgagattcccaatgaaaagtttcgattatacaaattaaagatgatg
gcaaagatggaaaaatatcttcattccagaaggtgtaggcgaaaactcatcttgtctcat
tttgaagacaaacaactaagaaaggcctccgtgggtattatgggaactgaaaaatgctgt
gataattgcaggtccagattggatcattgctatgccattgatgactcagatgagacatca
aaggactttggtccacaagcattccagctattatctgctgtggaaatcttaggagaaaag
tttggaattggacttccgattttatttctccaaggatctagttcccagcgtcttccagat
caatatcgcagacacaatttatttggcagtggcaagaatcagacagagagttggtggaag
gctttgtcccaccagctcatggctgagggattcttggtagaagtttctgggaaacgcaga
tttgtaaggatttgcactcttacggaaaagggcagatgttggcttcatgaagctggtaca
gagtctcctaagaaacttatcctccaagctagtgaagaattgtgtccgagggtgtttctt
ctaccaagttctaaaactgtaccacctggagttgaacagggttcctataatcaagtacca
gctgagtcaaccacagacaagaagcagcctaacttggagaagatgtattcttataaagca
actgataaaatttcttctgggagaaacattcctaaaaaaagcatcatggtacgttcacca
ggaaaacctcacaagtcctcagaacctgttatttcagctcaagagcaggagactgagact
gtgttgtacggcaaactggtggaagccaggcagaaacaagccagtaaaatggatgtccct
ccagctatcctggcaacaaataagatactactggatatggccaaaatgagacctactaca
tttgaaaatgtgaaaaggatcgatggtgtgtctgaaggcaaagctaatatgttgacccct
ctgttggaagtcatcaaagatttctgtcaaataaataacactcagacagacctcttttca
aggacaaaacctcaggaagaacaaaggaacagcatggtggctaaaaatgaagcatgctcc
ctttcacagcctgtggccatcacgtattacttattccaagaaaagaagatgtctttgata
agtatatccaaggagagggttatgcctgtcacaatggttgggatgcacttaacccaagca
atgaaagctggctgcccacttgatacggaacgagcaggcctgactccagaggttcagaag
attattgctgatgttatccgaaaccctcccatcaactcagatataaatgaagttaaacta
attagaaagctggttcctgaaaacattgacacgtaccttatccacatggcacttgagatc
ctgggaaaagactgtgacaacagactgttagaccagctttcatgtacttccaacagaaag
agatatttccccaactctgaagagagctgttcaagttctaagagaagcagggaagaagta
ggcgctaatactaagcctgcctctgtaacctcaaagagaaaattacctgagtggtttgcc
aaaggcagtgagacttcagctgacaccagcaagaaatcaatggccagaacaaaaaagaaa
ggtctttttagttaa
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