Lutra lutra (Eurasian river otter): 125092427
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Entry
125092427 CDS
T08100
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125092427
04121 Ubiquitin system [BR:
llv04121
]
125092427
Transcription factors [BR:
llv03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
125092427
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
125092427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
hAT-like_RNase-H
PRRSV-NSP11_N
Motif
Other DBs
NCBI-GeneID:
125092427
NCBI-ProteinID:
XP_047572862
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All DBs
Position
X:98356245..98365799
Genome browser
AA seq
695 aa
AA seq
DB search
MEAKGLDPSQTDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
SNLSYHLEKNHPDEFCEFVKSNTEQMREAFATAFSKLKPEASQLTPPDTLAAKAGHGHES
KRQQELTAAVIGLICEGLYPASIVDEPTFKVLLKTADPRYELPSRKFLCSKAIPEKYGAV
REAVLKELSDASWCGISTDMWRSENQNRAYVTLAAHFLGGGAPGCLSVGSRCLKTFEVPE
DNTAESITRVLYEAFIEWGISAKVFGATTDCGKDIVKACSLLDISVQMPCLGHTFNAGIQ
QALQLPKLAGLLARCRKLVEYFQQSTVAMYMLYEKQKQQNMAHCMLVSNRVSWWGSTLAM
LQRLKEQQFVIAGVLVEDSNNHHLMLEAAEWATIEGLVELLQPFKQVAEMLSASKYPTIS
MVKPLLHMLLNTTLNIKETDCKELSMAKEVIAKELSKTYQEAPEIDMFLNVATFLDPRYK
RLPFLSAFERQQVENRVVEEAKGLLDKVKDGGGYRAAEDKMYALPEEPPVKKLVLASTPP
PTSVINSMLAEIFCQTGGAEDQEEWHAQVVEELSNFKSQKVLGLNEDPLKWWSDRLALFP
VLPKVLQKYWCVAATRVFPERLFGTSANVVSAKRNRLAPAHVDEQIFLYENARSGAEAEP
EDEDEGEWGLDHEQLFPLGDAVHAGFFGIRDSGFM
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaaaggcctggacccgtcccagacagacctcaaactagtggcccacccgcgc
gccaagagcaaagtgtggaagtacttcggcttcgacaccaacgccgagggatgcatcttg
cagtggaagaagatatactgtcgcatctgcatggcccagattgcctattccggcaacacg
tccaacctctcctatcacctggagaagaatcaccccgatgagttctgtgagttcgtcaag
agcaacacggagcagatgcgcgaggccttcgccaccgccttctccaagctgaagcccgag
gcgtcgcagctgaccccaccggacacgctggccgccaaggccgggcatggccatgagagc
aagcggcagcaggagctcacggctgccgtcatcggcctcatctgtgagggcctgtatccc
gcgtccatcgtggacgagcccacgttcaaggtgttgctgaagacggctgaccccaggtac
gagctgcccagcaggaaattcttatgcagcaaggccatccctgagaagtacggcgccgtc
cgcgaggctgtcctcaaggagctcagcgacgcgtcctggtgcggcatctccacggacatg
tggaggagcgagaatcagaatcgagcctatgttactctggccgcccacttcctaggcggc
ggggcccccggctgcctgtccgtgggctcccgctgcctgaagaccttcgaggttcccgag
gacaacacggccgagtccatcaccagggtcctgtacgaggccttcatcgagtggggcatc
agcgcgaaggtgtttggggccaccacggactgtggcaaggacatcgtgaaggcgtgctcc
ctgctggacatctcggtgcagatgccctgcctgggacacacgttcaacgcgggcatccag
caggccctgcagctgcccaagctggccgggctgctggcccgctgccgcaagctggtggag
tacttccagcagtccacggtggccatgtacatgctctacgagaagcagaagcagcagaac
atggcgcactgtatgctggtcagcaaccgcgtgtcctggtggggtagcacgctggccatg
ctccagcgcctcaaggagcaacagtttgtcattgcgggcgtgctggtggaggacagcaac
aaccaccacctgatgctggaggccgctgagtgggccaccatcgagggcctggtggagctg
ctgcagccctttaagcaggtggccgagatgctctccgcctccaagtaccccaccatcagc
atggtgaagcctctcttgcacatgctgctgaacaccacgctgaacatcaaggagaccgac
tgcaaggagctcagcatggccaaggaggtcatcgccaaggagctgtccaagacctaccag
gaggcgcccgagatcgacatgttcctgaacgtggccaccttcctggacccccgatacaag
cgcctgcccttcctgtccgcctttgagaggcagcaggtggagaacagggtggtggaggag
gccaagggcctgctggacaaggtcaaggacggcggcggctaccgggcggcggaggacaag
atgtacgcactgcccgaggagccgccggtgaagaagctggtgctggcgtccacgccgccg
cccaccagcgtcatcaacagcatgctggccgagatcttctgccagacggggggcgcggag
gaccaggaggagtggcacgcgcaggtggtggaggaactcagcaacttcaagtcgcagaag
gtgctgggcctcaacgaggaccccctcaagtggtggtccgaccgcctggcgctcttcccc
gtgctgcccaaggtgctgcagaaatattggtgcgtggcggccacgcgcgtcttcccggag
cggctcttcggcacctccgccaacgtggtcagcgccaagaggaacaggctcgccccggcg
cacgtggacgagcagattttcctgtacgagaacgcgcgcagcggcgcggaggccgagccc
gaggacgaggacgaaggggagtggggcctggatcacgagcaactgttccccctcggggac
gctgtgcacgctggcttctttgggatcagggacagcggcttcatgtag
DBGET
integrated database retrieval system
