Lutra lutra (Eurasian river otter): 125092432
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Entry
125092432 CDS
T08100
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36 isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03440
Homologous recombination
llv04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125092432
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125092432
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
llv01002
]
125092432
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125092432
03036 Chromosome and associated proteins [BR:
llv03036
]
125092432
03400 DNA repair and recombination proteins [BR:
llv03400
]
125092432
Peptidases and inhibitors [BR:
llv01002
]
Metallo peptidases
Family M67
125092432
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
125092432
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
125092432
BRISC complex
125092432
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
125092432
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
125092432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
DUF2804
Motif
Other DBs
NCBI-GeneID:
125092432
NCBI-ProteinID:
XP_047572869
LinkDB
All DBs
Position
X:complement(604724..660098)
Genome browser
AA seq
316 aa
AA seq
DB search
MAVQVVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFTYTGTEIR
TVAEKVDTVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGW
YHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQK
SSESPHGPRDFWSSSQHISIEGQKEEERYERIEIPIHIVPHVTIGKVCLESAVELPKILC
QEEQDAYRRIHSLTHLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLQQ
LQQEKEELVQELSSLE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaggtggtacaagccgtgcaagcggttcatctcgagtcggatgctttccta
gtttgcctcaaccacgctctaagcaccgagaaggaggaggtgatggggctgtgtataggg
gagttgaatgatgacacaaggagtgactccaaatttacgtatactggaactgaaatacgc
acagttgctgaaaaggttgacaccgtcagaattgttcacattcattctgtcatcatcttg
cgacgttctgacaagaggaaggaccgagtggaaatttctccagagcagctgtctgcagcc
tcaacagaggcagagaggttggctgaactaacaggtcgtcccatgagagttgtgggctgg
tatcattcccatcctcatataactgtttggccttcacatgttgatgttcgcacgcaagcc
atgtaccagatgatggatcaaggctttgtaggacttattttttcctgtttcatagaagat
aaaaacacaaagactggccgagtactctacacttgctttcaatctatacaggcccagaag
agctcagagtcccctcatggtccacgagacttctggagttccagccagcacatctccatt
gagggccagaaggaagaggaaaggtatgagaggattgaaatccccatccatattgtacct
cacgtaaccattgggaaagtatgcctggagtcagcagtcgagctgcccaagatcctgtgc
caagaggagcaggatgcatacaggaggatccacagcctgacacatctggactcagtaacc
aagatccataatggctcagtgtttaccaagaatctgtgcagccaaatgtcggcggtcagc
gggcctctcctgcagtggctggaggacaggctggagcagaaccagcagcacctgcaacag
ctgcagcaggaaaaggaggagctggtgcaagagctttcttctctagagtag
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integrated database retrieval system
