Lutra lutra (Eurasian river otter): 125092452
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Entry
125092452 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear RNA export factor 3-like
KO
K14284
nuclear RNA export factor
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03008
Ribosome biogenesis in eukaryotes
llv03013
Nucleocytoplasmic transport
llv03015
mRNA surveillance pathway
llv05014
Amyotrophic lateral sclerosis
llv05164
Influenza A
llv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125092452
03015 mRNA surveillance pathway
125092452
03008 Ribosome biogenesis in eukaryotes
125092452
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125092452
05168 Herpes simplex virus 1 infection
125092452
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125092452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125092452
03009 Ribosome biogenesis [BR:
llv03009
]
125092452
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125092452
mRNA cycle factors
Stress granule specific factors
125092452
Ribosome biogenesis [BR:
llv03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
125092452
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
Tap-RNA_bind
LRR_NXF1-5
NTF2
Citrulline_exp
TAP_C
RRM_NXF1-2
Motif
Other DBs
NCBI-GeneID:
125092452
NCBI-ProteinID:
XP_047572896
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All DBs
Position
X:41625432..41636658
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AA seq
588 aa
AA seq
DB search
MPLRKGLPVRTPSCLCDADKVVCGLLSPSSAAVTDHLQTSSSRPHGFSSQATWEDIGDGS
LPSVHTMGHNDVGNPLKRRTRCWGIYRRRYNNWSEQISSGIHPSSHQQQDGDPATNGAHM
STRVRYAPYAVPPCHRRGNSQKQDQTQTNMEGEQKPPERRMEQEKQDETTGKWFKIIVSF
GIKYDEKWLLDLIQGQCSVPFTPVEYSYERMQAQFFVEDASVAFALKNVNGKIWDEANER
ISIFIYPSDTPHSVQKELKSVKVEQTKLLPLNLRNKTPCQLDGLSDTVQNALALXNLNLS
NSEVMSLEELDEGKSLQPEEMTADRSTLCTAFPDKSTNISSILELFPKLLRLDSQESPSP
TSIGIAAHKWLPTCRGSFFGSDALKRLVLQFLQHYYLIYDSRDRQGLLGAYHEEACFSLA
IPFSPEDPGPSSLCEYFKESRNMKKLKDPSLRVQLLKHTKCDVMRSLCVLPKTQHDLSSF
VVDMWFQTERMLCFSVNGVFKEVEGMSRDSVRAFTRTFIATPVSNYSLCIVNDDLFVRDA
SPKETQSTSSVPVPTPSCSSWPTLCQKQQEMGQTFSTQSGMNLQWSQK
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcctttaaggaagggacttcctgtaaggactccttcttgtttgtgtgacgctgacaaa
gtggtttgtggcctgctctcaccttcctcagcagccgtcactgatcatctccaaacatcc
agctccagaccccacggattctcttcacaagcaacctgggaggacattggtgacgggtca
ctgccttcagtccacaccatggggcataatgatgtgggtaaccccttaaaaagaagaaca
agatgctggggcatttaccgaaggagatacaacaactggtctgaacaaattagttctggc
attcatccttcatcccaccagcaacaagatggagatccagcaacaaatggtgctcacatg
agcacccgagtgagatacgctccctatgctgttccaccatgtcatcggagaggcaattct
cagaaacaagaccaaacccagactaacatggagggagagcaaaagcctccagagagaaga
atggagcaggagaagcaggatgagaccacagggaaatggttcaagatcattgtgagtttt
ggcatcaaatatgatgagaagtggctgctggatctgattcagggacaatgcagtgtcccc
ttcaccccagttgagtattcatatgagagaatgcaggcccagttttttgttgaggatgcc
agcgttgcctttgcactgaagaatgtcaacggcaagatctgggatgaagctaatgaaagg
atctctatctttatctacccctctgacacaccccactctgtgcagaaggagctgaagtca
gtaaaggtggagcagacaaagcttttacccttgaacctgagaaacaagacaccctgccaa
ctggatggcctgtctgacactgtgcagaatgccctggcattanngaacttgaacctctcc
aacagtgaggtgatgtctttagaggagctggacgagggcaaaagtctgcagccagaagag
atgactgctgacagaagcaccctgtgcaccgccttccctgataaatcaaccaacataagc
tccatcctggaattgtttcccaagttattacgcctggacagccaggagtcaccttcacca
accagcattggtattgcagcccacaagtggttaccaacctgcaggggaagcttctttgga
tctgatgccctgaagcgtctagtcctgcaattcctgcagcattactacttgatctacgac
tccagagaccgtcagggtctccttggtgcctaccacgaagaggcctgcttctccctggcc
attcccttcagccccgaggacccaggcccaagcagcttgtgcgagtacttcaaggaaagc
aggaatatgaagaagctcaaggacccctccctgcgtgttcagctgctgaagcatacaaaa
tgtgacgtcatgcgctccctctgtgtgctgcccaaaactcagcatgacctcagctccttc
gtggtggacatgtggttccagacggagaggatgctctgcttctctgtcaacggggtgttc
aaggaagtggaaggcatgtctcgggattctgttcgtgccttcactcggaccttcattgct
actcctgtcagcaattacagtctatgcatcgtgaatgatgatctgtttgtgagggacgcc
agccccaaggagacccagagcacatcctctgtcccagtgcccacaccctcctgcagctcc
tggcccaccctttgccagaagcagcaggaaatggggcagactttctccacccagtctggg
atgaatctccagtggtctcagaagtga
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