Lutra lutra (Eurasian river otter): 125092594
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Entry
125092594 CDS
T08100
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
llv01002
]
125092594
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125092594
Enzymes [BR:
llv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125092594
Peptidases and inhibitors [BR:
llv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125092594
Ubiquitin system [BR:
llv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125092594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Motif
Other DBs
NCBI-GeneID:
125092594
NCBI-ProteinID:
XP_047572912
LinkDB
All DBs
Position
Y:complement(356787..525045)
Genome browser
AA seq
2558 aa
AA seq
DB search
MTATTRGSPIGRNDSQGQAPDGQSQPLFQQNQTLSADSSNGNSPTTPLDEQGQGDAPPQH
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDIKSEACQRFF
RDGLTVSFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLDLLAVALNP
HCKFHIYNGTRPCESVSTNAQLPEDELFARSSDPRSPKGWLVDLINKFGTLNGFQILHDR
FVNGSALSVQIIAALIKPFGQCYEFLSQHTVKKYFLPVIEIVPQFLENLTDEELKKEAKN
ETKNDALSMIIKSLKNLASRIPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEINK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNSILSIVLQDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSSSRFSQTQRSPH
VFYRHDLINQLQHNHALVTLVAENLANYMNSIRLYARDHEDYDPQTVRHGSRYNHVQEVQ
ERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDI
NKDFFESNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLW
RVVIHSNDDIANRAIDLLKEIYTNLGPRLQINQVVIHEDFIQSCFDRLKASYDTLCVLDG
DEDNINCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHLSLIVRFPNH
GRQVDDLDVWSHTNDTVGSVRRCILNRIKANAAHTKIELFVGGELMDSEDDRKLIGQLNL
KDKSVITAKLTQVSSNMPSSPDSSSDSSPGSPGNHCNHYSDGPNPEVENCLPGVIMSLHP
RYISFLWQIADLGSNLNMPPLRDGARILMKLMPPDSATVQKLRAICLDHAKLGENNLGPA
LESLFFGPSASQVLYLTEVVYALLMPASAPLADDSSDFQFHFLKSGGLPLVLSMLTRNNF
LPNTDTETRRGAYLNGLKIAKLLLTAIGYGHVRAVAEACQPVVEGADPITPINQVTHDQA
VVLQNALQIIPNPSSECMLRNVSIRLAQQISDEASRYMPDTCVIRAIQKIIWASGCGALD
LVFSPNEEITKIYDMTLTASTEPDMEDEQLCCEALEVMTLCFALIPTALDALSKEKAWQT
FIIDLLLHCPSKTVRQLAQEQFFLMCTRCCMGHRPLLFFITLLFTILGSTARERGKHSGD
YFTLLRHLLNYAYNSNISVPNAEVLLNNEIDWLKRIRDNVKNTGETGVEEPILEGHLGVT
KELLAFQTPEKKYHIGCEKGGGNLIKELIDDFIFPASKVYLQCMRNGELPAEQAIPVCSS
PATINAGFELLVALAVGCVRNLKQIVDCLTEMYYIGTAITTCEALTEWEYLPPVGPRPSK
GFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAVEGTGSDVDDDMFGDEKQDNESNVDPR
DDVFGYPHQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLW
GEPVNLREQHDALEFFNSLVDSLDEALKALGHPAILSQVLGGSFADQKICQGCPHRYECE
ESFTTLNVDIRNHQNLLDSLEQYIKGDLLEGANAYRCEKCDKKVDTVKRLLIKKLPPVLA
IQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVPGVTKLEENNVNPDKHLIQQNEQSE
SETTGSTKYRLVGVLVHSGQASGGHYYSYIIQRNGKDGERNRWYKFDDGDVTECKMDDDE
EMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDQDDEMIRYISELTI
TRPHQIMSPAIERSVRKQNVQFMHNRMQYSLEYFQFVKKLLTCNGIYLSPAPGQDHLLPE
AEEITMISIQLAARFLFTTGFHTKKIVRGPASDWYDALCILLRHSKNVRFWFAHNVLFNV
SNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSSFTSPGLTGQACDNLSLSDHL
LRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGMAEKTQLLKLSVPATFMLVSLDEGPGP
PIKYQYAELGKLYSVVSQLIRCCNVSSRMQSSINGNPPLPNPFGDPNLSQPIMPIQQNVA
DILFVRTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPY
LDLLLQILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFS
NCAVAYQILQGNGDLKRKWTWAVEWLGDELERRPYTGNPQYAYNNWSPPVQSNETSNGYF
LERSHSARMTLAKACELCPEEEPDDQDAPDEHESALPEDTPLYLHSSGSHCQQNNHVHGQ
PYTGPAAQHLNNHQKTGQHTQENFESNEEVSLSEMKDQ
NT seq
7677 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacaactcgtggctctccaataggaaggaatgacagccaaggccaggctcct
gatggacaatctcagcccctcttccaacagaatcagaccttatcagctgactcctccaac
gggaattccccaacaactcccctggatgaacaaggtcaaggtgatgctccaccacaacac
gaagacgaagaacctgcatttccacatactgacttggcaaagttggatgacatgatcaat
aggcctcggtgggtggttccagttttgccaaaaggggaattagaagtgcttttagaagct
gctattgatcttagtaagaaaggtcttgatattaaaagtgaagcatgtcagcgttttttt
cgagatgggttaacagtatctttcactaaaattcttatggatgaggcagtgagtggctgg
aaatttgaaattcataggtgtattattaacaatactcatcgtctagtggagctttgtgtg
gccaagttgtcccaagactggtttccacttctagatcttcttgctgtggccttaaatcct
cattgcaaattccatatctacaatggtacacgtccatgtgaatccgtttctacaaatgct
cagttgcctgaagatgaactatttgctcgttcctcagatcctcgatcaccaaaaggttgg
ctagtggatctgatcaataaatttggcacattgaatgggttccagattttgcatgatcgt
tttgttaatggatcagcactgagtgttcaaataattgcagcccttattaaaccatttgga
caatgctatgagtttctgagtcaacatacagtgaaaaaatactttcttccagttatagaa
atagttccacagttcttagaaaacttaactgatgaagaactgaaaaaggaagcaaagaat
gaaacaaaaaatgatgccctttcaatgattattaaatctctgaagaatttggcttccaga
attccgggacaagaagaaactgtaaaaaatttagaaattttcagattgaaaatgatactc
agattgttgcagatttcttcttttaatggaaagatgaatgcactgaatgaaattaacaaa
gtaatatctagtgtatcatattatactcatcggcatggtaatcctgaggaggaagagtgg
ctgacagctgaacgaatggcagaatggatacaacagaacagtatcttatccatagtcttg
caagatagtcttcatcagcctcagtatgtggaaaagctagagaagattcttcgttttgtg
attaaagaaaaggctcttacattacaggatcttgataacatctgggcagcacaggcagga
aaacatgaagccattgtgaagaatgtacatgacctgctggcaaagttggcttgggatttt
tctcctgagcaacttgatcatctttttgattgctttaaggcaagttggactaatgccagt
aaaaagcaacgcgaaaagctactggagctgattcgtcgtcttgcagaagatgataaagat
ggtgtgatggcacacaaagttttgaacctgctttggaatctggcccatagtgatgatgtg
cctgtagacatcatggacttagctctcagtgcccacataaaaatactagattacagttgt
tcccaggatcgagacacacagaagatccagtggatagatcgctttatagaagaacttcgt
acaaatgacaagtgggtaattcctgcactaaaacaaataagggaaatttgtagtttgttt
ggtgaagcacctcaaaacttgagttcttctcgttttagtcaaactcagcgaagtccccat
gtattttatcgtcatgatttaatcaaccagcttcagcacaatcatgccttagttactttg
gtggcagaaaaccttgcaaattacatgaatagtattcgactgtatgctagagaccatgaa
gactatgacccacaaactgtgaggcatggaagtagatacaatcatgttcaagaagtccaa
gaacggcttaacttccttagatttttattgaaggatggccaactgtggctctgtgctcct
caggcaaaacaaatctggaaatgcttagcagagaatgcagtttacctttgtgatcgtgaa
gcctgttttaagtggtattccaagttaatgggggatgaaccagacttagatcctgatatt
aataaggacttctttgaaagcaatgtgcttcagcttgatccttcccttttaactgaaaat
ggaatgaaatgttttgaacgattcttcaaagcagttaattgtcgtgaagggaaactagta
gcaaaaagaagagcctatatgatggatgatttggaactaataggattagactacctttgg
agggttgtgattcatagtaatgatgacattgccaacagagccatagatctccttaaagag
atatatacaaaccttggtccaaggttacagatcaatcaggtagttatccatgaagatttc
atccaatcttgctttgatcgtttgaaagcctcatatgatacattgtgtgttttggatggt
gatgaagacaatattaattgtgcaagacaagaagccattcgaatggttcgagtattaact
gttttaagggaatatataaatgaatgtgacagtgattatcatgaggaaagaacaattcta
cctatgtcaagagcattccgtggtaaacacctctctcttatagttcgatttccaaaccat
ggcagacaggttgatgacttggacgtatggtctcatacaaatgatacagttggttctgta
cgacgatgtattctcaaccgtattaaagcaaatgcagcccatacaaaaattgaactcttt
gtgggtggtgagctaatggattctgaagatgacagaaagctaataggacaattaaactta
aaagataaatcagtaattaccgctaaacttacacaagtaagttccaatatgccgtcaagc
cctgatagttcttctgattcttcacctggatcacctggcaaccactgtaatcactacagt
gatggtcccaatccagaagtggaaaattgtttgcctggggtgataatgtcactgcatccc
agatacatatctttcctttggcaaattgcagatttaggtagcaatctgaatatgccacct
cttagggatggagcaagaatacttatgaaacttatgcccccagatagcgcaacagtacaa
aaattaagagctatttgtttggatcatgcaaaacttggagaaaataatcttggaccggct
cttgaatcacttttctttggtccttctgcctcccaagtgctatacctaacagaggttgtt
tatgccttgttaatgcctgctagtgcacctttggcagatgattcctctgactttcaattt
cacttcttgaaaagtggtggcttacctcttgtactgagtatgttaacaagaaataacttc
ctgccaaatacagacacagaaactcgaaggggtgcttacctcaatggtcttaagatagcc
aaactgttgttaactgccataggctatggccatgttcgagctgtagcagaagcttgtcag
ccagttgtagaaggtgcagatcccataacaccgattaaccaagttactcatgatcaagca
gtggtgctacaaaatgcccttcagattattccaaacccatcatctgagtgcatgcttaga
aatgtatccatacgtcttgcccagcaaatatctgatgaggcttcaagatacatgcctgat
acttgtgtaattagagctatacaaaaaatcatctgggcatcaggatgtggggcattagat
ttggtatttagcccaaatgaagaaatcacaaaaatttatgacatgaccctcactgcaagc
actgagccagacatggaggatgaacagctttgctgtgaagcattggaagtgatgacatta
tgttttgctctgattccaacagccttggatgcacttagtaaagaaaaagcctggcagaca
tttatcattgacttattattgcactgtcccagcaaaactgttcgtcagttggcacaggag
caattttttttaatgtgcacaagatgttgcatgggacacaggcctctacttttcttcatt
actctgctctttaccattttggggagcacagcacgagagagaggtaaacattcaggtgac
tatttcactcttctacggcaccttcttaattatgcttacaacagcaatatcagtgtaccc
aatgctgaagttcttctaaacaatgaaatagattggctcaaaagaattagggataacgtt
aaaaacacaggtgaaacaggtgttgaagagccaatcttggaaggtcaccttggggtaaca
aaagagttactagcctttcaaacacctgagaaaaagtatcatattggttgtgaaaaagga
ggtggtaatctcattaaagaattaattgatgatttcatctttcctgcttccaaagtttac
ttgcaatgtatgagaaatggagaactgccagctgagcaggctatcccagtctgtagttca
cctgccaccatcaatgctggttttgaactacttgtagcattagctgttggctgtgtaagg
aacctcaaacagatagtagactgtttgactgaaatgtattacataggcacagcaataact
acttgtgaagctcttactgaatgggaatatctaccacctgttggaccccgcccatcgaaa
ggatttgtgggactcaaaaacgctggtgctacatgttatatgaactctgtgatacaacag
ttatacatgattccttccatcagaaacagtattcttgctgttgaaggcacaggtagtgat
gtagatgatgatatgttcggtgatgagaagcaggacaatgagagtaatgttgatccccga
gatgatgtatttggatatcctcatcaatttgaagacaaaccagctttgagtaagacagaa
gataggaaagaatacaatattggtgtcctaagacatcttcaggtcatctttggtcattta
gctgcttcccgactacaatactatgtgcctagaggattttggaaacagttcaggctttgg
ggtgaacctgttaaccttcgggaacaacatgatgccttagagttttttaattctttggtg
gatagtttagatgaagctttaaaagctttaggacacccagctatactaagtcaagttcta
ggcggttccttcgctgatcagaaaatttgccaaggctgcccccatagatacgagtgtgaa
gaatcttttacaactctgaatgtagatattagaaatcaccaaaaccttcttgattctttg
gaacagtatatcaaaggagatttattggaaggtgcaaatgcatatcgatgtgaaaaatgt
gataaaaaggttgatacagtaaagcgcttgctaattaaaaagttacctcctgttcttgct
atacaattgaaacgatttgactatgactgggaaagagaatgtgcaattaaattcaatgat
tattttgaatttccacgagagctagacatggaaccttatacagtaccaggtgttacaaaa
ctggaagaaaataatgtaaacccagacaagcacttgatacaacagaatgagcagtctgaa
agtgagacaacaggaagcacaaaatacagacttgtgggtgtgcttgtacacagtggtcaa
gcaagtggcggacattattattcttacatcattcaaaggaatggtaaagatggtgagaga
aatcgctggtataaatttgatgatggagatgtaacagaatgtaaaatggatgatgatgaa
gaaatgaaaaatcagtgtttcggtggagagtacatgggagaagtatttgatcatatgatg
aagcgaatgtcatacaggcgccagaaaagatggtggaatgcttatatacttttttatgaa
cgaatggacacaatagaccaagatgatgagatgataagatatatatcagagctaactatc
acaagaccccatcaaattatgtcaccagccattgagagaagtgttcgaaaacaaaatgtg
caattcatgcataaccgaatgcagtacagtttagagtattttcagtttgtgaaaaaactg
cttacatgtaatggtatttatctaagccctgctccaggacaagatcacttgttgcctgaa
gcagaagaaatcactatgattagtattcagcttgcagctagattcctctttaccactgga
tttcacaccaagaaaattgtccgtggccctgccagtgattggtatgatgctctgtgcatt
ctactccgtcatagcaaaaatgtgcggttttggtttgctcataatgttctttttaatgtt
tcaaatcgcttctctgaatatctccttgagtgccctagtgcagaagtgaggggtgcattt
gcaaaacttatagtatttattgcacatttttctttgcaagatgggccttgtccttcatca
tttacatctcctggacttactggtcaggcatgtgataacttaagcttgagtgatcactta
ctaagagcagtattaaatctcctcagaagagaggtttcagagcatggccgtcatttacaa
caatatttcaatctgtttgtaatgtatgccaatttaggcatggcagaaaagacacagctt
ctgaaattgagtgtacctgctacatttatgttagtgtctttagatgaaggaccaggtcct
ccaatcaaatatcagtatgctgaattgggcaagttatattcagtagtgtctcagctgata
cgctgttgcaatgtctcatcaagaatgcagtcttcaatcaatggtaatccccctcttccc
aatccttttggtgatcctaatttatcacagcctataatgcctattcagcagaatgtggca
gacattttgtttgtgagaacaagttatgtgaagaaaattatcgaagactgcagtaactct
gaggaaaccatcaaattgcttcgtttttgctgctgggagaatcctcagttctcttctact
gtcctcagtgaacttctctggcaggttgcatattcatacacctatgaacttcggccatat
ttggatttacttttgcagattttacttattgaagattcttggcagactcacagaattcat
aatgcacttaaaggaatcccagatgatcgagatggtttgtttgatacaattcagcgctct
aagaaccactatcaaaaaagagcataccagtgtataaaatgtatggtagcactctttagc
aattgtgctgttgcttaccaaatattacagggtaatggagatcttaaaagaaagtggacc
tgggcagtggaatggcttggagatgaacttgaaagaagaccatatactggcaatcctcaa
tatgcttacaataactggtctcctccagtgcaaagcaatgaaacatcaaatggctatttt
ttggagagatcacatagtgcaaggatgactcttgcaaaagcttgtgaactctgcccagag
gaggagccagatgatcaagatgctccagatgagcatgagtcagctctaccagaagatacc
ccattgtatcttcattcatctggatctcactgtcaacagaataatcatgtgcatggacag
ccatatacagggccagcagcacaacacttgaacaaccaccaaaaaactggccaacacaca
caagaaaattttgaaagcaatgaagaagtatccttatctgaaatgaaggatcagtga
DBGET
integrated database retrieval system
