Lutra lutra (Eurasian river otter): 125092606
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Entry
125092606 CDS
T08100
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04622
RIG-I-like receptor signaling pathway
llv05161
Hepatitis B
llv05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
125092606
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
125092606
09172 Infectious disease: viral
05161 Hepatitis B
125092606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125092606
03041 Spliceosome [BR:
llv03041
]
125092606
03036 Chromosome and associated proteins [BR:
llv03036
]
125092606
Enzymes [BR:
llv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125092606
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125092606
mRNA cycle factors
Common to processing body (P body) and stress granule
125092606
Spliceosome [BR:
llv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125092606
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125092606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125092606
NCBI-ProteinID:
XP_047572965
LinkDB
All DBs
Position
Y:complement(319650..336623)
Genome browser
AA seq
661 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGGSTASKGRYIPPHLRNREASKGFYDKDSSG
WSCSKDKDVYSSFGSRDSRGKPSYFSDRGSGPRGRFDDRGRSDYDGIGSRGDRTSFGKFE
RSGHSRWCDKSDDDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYTDGPGEALKAVKENGRYGRRKQYPISLILAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPPKGIRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
WVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNERNVNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGGSRGRSKSRFSGGFGARD
YRQSSGSSSSSFSSGRASSSRSGGGGHSSSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWG
N
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgctcgggctggaccagcagtttgctggtctagac
ctgaactcctctgataatcagagtggaggaggaagtacagcgagcaaaggacgctatata
cctcctcacttacggaacagagaagcctctaaaggattctatgataaagacagttcaggg
tggagttgtagtaaagataaggacgtctacagcagttttgggtcccgagattcaagagga
aagcccagttacttcagtgatcgtggaagtggaccaaggggaaggtttgatgatcgtgga
cggagtgactatgatggtattggcagtcgtggtgacaggactagctttggcaagtttgaa
cgcagtggacacagtcgttggtgtgacaaatcagatgacgatgactggtcaaaaccactt
ccaccaagtgaacgattggagcaggaactcttctctggaggaaacaccggaataaacttt
gagaaatacgatgatataccagtagaggcaactggcaataactgtcctccacatattgaa
agtttcagtgatgttgagatgggagaaattatcatggggaacattgagctgactcgttac
actcgtccaactccagtgcagaaacatgccattcctattatcaaagaaaaaagagacttg
atggcttgtgcccaaacagggtctggaaaaactgcagcatttctgttgcccatcttaagt
cagatttacacagatggtccaggcgaggctttgaaggctgtgaaggaaaatggaagatac
gggcgccgtaaacaatatcctatctccttaattttagcccccacaagagaattggctgta
cagatttatgaggaagccagaaaattttcataccggtctagagttcgtccttgtgtggtt
tatggtggtgctgatattggtcagcagattcgagacttagagcgtggttgtcacttgtta
gtggccactccaggacgtctagtggatatgatggaaagaggaaagattggattagacttt
tgcaaatacttagtgttggatgaagcagataggatgctggatatgggatttgaacctcag
atacgacgtatagttgaacaagatactatgccaccaaagggtattcgccacactatgatg
ttcagtgctactttccctaaggaaatacagatgcttgctcgtgatttcttggatgaatac
atttttctggctgtaggcagagttggctccacctctgagaacatcacacaaaaagtagtt
tgggtggaagaatcagacaaacgatcatttcttcttgatctcttaaatgcaacagggaag
gattcactgactttagtgtttgtggagaccaaaaagggtgctgattctttggaggacttc
ttataccatgaaggatatgcttgtaccagtatccatggtgaccgatcacagagagataga
gaggaggcccttcaccagttccgctcaggaaaaagccctattttagtggctacagctgtg
gcagcaagaggactagacatttcaaatgtgaaacatgttatcaattttgatttgccaagt
gatattgaggaatatgtacatcggattggccgtacaggacgtgtgggaaaccttggcctt
gccacctcattctttaatgaaagaaacgtaaatatcacaaaggatttgttggatctgctc
gttgaagctaaacaagaagtgccatcttggttagaaaatatggcttatgaacaccactat
aagggtggcagtcgtggacgctctaagagtagattcagtggaggatttggtgccagagac
tatcgacaaagtagtggttccagcagttctagctttagtagtggtcgtgcaagcagcagc
cgtagtggtggaggtggtcacagcagcagcagaggatttggtggaggtggctatggaggc
ttctacaatagtgatggatatggaggaaattacaactcccagggggttgactggtggggc
aattga
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