Lutra lutra (Eurasian river otter): 125092860
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Entry
125092860 CDS
T08100
Name
(RefSeq) PDZ and LIM domain protein 2-like isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125092860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
llv04990
]
125092860
Domain-containing proteins not elsewhere classified [BR:
llv04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125092860
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GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
Motif
Other DBs
NCBI-GeneID:
125092860
NCBI-ProteinID:
XP_047573289
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All DBs
Position
2:45256423..45271441
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AA seq
367 aa
AA seq
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MALTVDVAGPGPWGFRITGGRDFHTPIMVTKVTERGKAEAADLRPGDIILAINGESAEGM
LHAEAQSKIRQSPSPLRLRLDRSRAASPGQTNGEGSVEVLATRFQGSMRTHTDSQSSLRS
SCSSPVSSSPQPGSPFSTLPLSRPHTLPGEAVVSRSFQSLAHSPGPTTADRFSYGGRPGN
RQASLTRAGDSAVLVLPPSPGPHSSSPRLRKGPSLLAASCPYSVDSEGGSRLLEEDSEVY
KMLQENREARLAPRQSSSFRLLQEALEAEERGGTPAFLPSQLSPQSSLPTSRALATPPKL
HTCEKCSTSIVNHAVRIQEGRYRHPSCYTCADCGLNLKMRGHFWVGDELYCEKHARQRYS
SPPTLSS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggccctgactgtggatgtggcggggcctgggccctggggcttccggatcactgggggc
agggatttccacacgcccatcatggtgaccaaggtaactgagaggggcaaggctgaggct
gctgacctccggcccggtgacattatcctggccatcaacggggagagtgctgagggtatg
cttcacgccgaggcacaaagcaagatccgccagagcccctcacccctgcggctgcggcta
gaccggtctcgggccgcttcccctgggcagaccaatggggaaggctctgtggaagtgctg
gcgactcgcttccagggctccatgaggacgcacacggacagccagtcctccctgcggtct
tcctgctccagccccgtgtcctccagcccccagccaggcagccccttctctaccctgccc
ctcagccgcccgcacaccctccctggagaggctgtggtcagccgcagtttccagagcctg
gcacactccccgggacccaccactgctgaccgcttctcctacgggggccgccccggaaac
cgccaggccagcctcacccgcgctggcgactcagctgtgctggtgctgccgccttccccc
ggtccccattcctccagccccaggctcaggaagggaccctcactcctggctgcctcctgc
ccctacagtgtggactcagaagggggaagccgccttctggaagaggactcagaagtctac
aagatgctgcaggagaatcgtgaggcgcggctcgccccccggcagtccagctcctttcgg
ctcttgcaggaagccctggaggctgaggagagagggggcacacctgccttcctgcccagt
cagctgagcccccagtcctccctgcccacctccagggcgctggccaccccacccaagctc
cacacgtgcgagaagtgcagcaccagcatcgtgaaccacgctgtccgcatccaggagggg
cgctaccgccaccccagctgttacacctgcgcagactgcgggctgaacctgaagatgcgc
gggcacttctgggtgggggatgagctgtactgtgagaagcacgcccgccagcgctactcc
tcaccccccaccctcagctcctag
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