Lutra lutra (Eurasian river otter): 125092925 Help Entry 125092925         CDS       T08100                                  Name (RefSeq) squalene synthase isoform X1   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism llv  Lutra lutra (Eurasian river otter) Pathway llv00100   Steroid biosynthesis llv01100   Metabolic pathways Module llv_M00101   Cholesterol biosynthesis, FPP => cholesterol Brite KEGG Orthology (KO) [BR:llv00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     125092925  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:llv01006]     125092925 Enzymes [BR:llv01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      125092925 Prenyltransferases [BR:llv01006]  Terpene biosynthesis   Squalene/phytoene synthase    125092925 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SQS_PSY HAUS4 Motif Other DBs NCBI-GeneID:  125092925 NCBI-ProteinID:  XP_047573387 LinkDB All DBs Position 2:complement(54832577..54864887) Genome browser AA seq 487 aa AA seqDB search MEEKLCSGPTIPMAAAACGTKAMSLFKRTFVLSPAAAPRGTGTGAGSPPRGCPLSPAAWP SKDWPRGEGVCGRLRTPPGACRRPQSHSCSSASPTSVCLLCPQDSLSSSLKTCYKYLNQT SRSFAAVIEALDGEMRHAVCIFYLVLRALDTLEDDMTISIEKKVPLLHNFHSYLYEPDWR YMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIVDICQKMGFGMAEFLDKHVTSEQEWDK YCHCVAGLVGIGLSRLFSASELEDPLVGEDTECANSMGLFLQKTNIIRDYLEDHREGREF WPQEVWGKYVKKLGDFAKPQNIDSAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCA IPQVMAIATLAACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIP SSDPSSGKTRQIISTIRTQNLPNCQLISRSHYSPLYLSFVMLLAALSWQYLSTLSQVTED YVQTGEH NT seq 1464 nt NT seq  +upstreamnt  +downstreamnt atggaggaaaaactctgctcgggccccacgatccccatggccgcggctgcctgcggcacc aaggccatgtccctgttcaagcggacctttgtgctgagtcctgccgcggcaccccggggc acaggcacgggcgccggctctccgccgcgcggctgccccttgtctcccgccgcctggccc tccaaggactggccgcggggggagggcgtctgcggccggctgcgcaccccgccgggagcc tgccgccggccccagtcccactcctgctcctccgcatctcccacctcagtgtgtcttctc tgtccccaggactcgctgagcagcagcttgaaaacttgctacaagtatctcaatcagacc agtcgcagttttgctgctgtcatcgaggcgctggatggggaaatgcgccatgcggtatgc atattttatctggtcctccgagccctggacactctggaagatgacatgaccatcagtata gaaaaaaaggttccactgctacacaactttcactcttatctttatgaaccagactggcgg tatatggagagcaaggagaaggatcgacaagtgctagaggacttcccaacgatctccctc gagtttagaaatttggctgagaagtatcaaacagtgattgttgacatttgccagaaaatg ggatttgggatggcggagtttttggataaacacgtaacctctgaacaggagtgggacaag tactgtcactgtgtcgccgggctggtgggaattggcctttcccgtctgttctcagcctca gagttagaagaccccttagttggtgaagacacagaatgtgccaattctatgggcctgttt ctgcagaaaacaaacatcattcgtgattatctggaagaccatcgagaaggcagagagttt tggcctcaagaggtttggggcaagtatgttaagaagttgggcgattttgctaagccacag aacattgattcagctgtgcagtgcctgaacgaacttataaccaacgcacttcaccacatc ccagatgtcatcacttatctttcaagacttagaaaccaaagtgtgtttaacttctgcgct attccacaggtgatggccattgccactctggctgcctgttacaacaatcagcaggtgttc aaaggcgtagtgaagatccgaaaagggcaggcagtaactctgatgatggacgccaccaat atgccagcggtcaaggctataatctaccagtacatggaagagatttatcatagaatcccc agctcagacccatcttctggtaaaaccaggcagatcatctccaccatcaggacccagaat cttcctaattgtcagctgatctcccgaagtcattactcccctctttacctgtcatttgtc atgctattggctgccctgagctggcagtacctgagcacgctgtcccaggtcacagaagac tatgtgcagactggagaacactga

DBGET integrated database retrieval system