Lutra lutra (Eurasian river otter): 125092975
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Entry
125092975 CDS
T08100
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM35 isoform X1
KO
K12012
tripartite motif-containing protein 35
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125092975
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125092975
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-B_box
zf-C3HC4_4
zf-RING_2
zf-RING_6
zf-RING_5
Baculo_IE-1
zf-RING_10
Prok-RING_4
CLZ
Motif
Other DBs
NCBI-GeneID:
125092975
NCBI-ProteinID:
XP_047573475
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All DBs
Position
2:59036081..59061441
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AA seq
493 aa
AA seq
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MELGPAASPGPSRSFKEELLCAVCYDPFRDAVTLRCGHNFCRVCVTRCWEVQVAPTCPVC
KDRAALADLRTNHTLNNLVEKLLREEAEGARWAGHRSPRLCRPHRGQFSLFCLDDKELLC
CSCQADPRHQGHRVQPVKDTAHDFRAKCRNMEHALREKAKAFWAMRRSYEAIAKHNQVEA
AWLEGRIRQEFDKLREFLRVEEQAILDAMAEEARQKQRLVEEKMKRLAEDTEALAQEIER
LQVEMKEDDVSFLMKHKSRKRRLFCTMEPEPMQPGMLIDICKYLDSLQYRVWRKMVTSVE
SVPFSFDPNTAAGWLSVSDDLTSVTNHGYRVQVENPERFSSAPCLLGSCVFSQGSHTWEV
DLGGLPSWRVGVVRLRQDAGAEGHSHSCYHDTRSGFWYVCRTQGVDGDHCMTSDPATSPL
VPAIPRRLRVELECEEGELSFYDAESHCHLYTFHARFGEVRPYFYLGGARGDGPLEPLRI
CPLHITIREELDG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggagctgggtcccgccgcgtcccccgggccttcccgctccttcaaggaggagctgctc
tgtgccgtctgctacgaccccttccgcgacgccgtgactctgcgctgcgggcacaacttc
tgccgcgtgtgcgtgacccgctgctgggaggtgcaggtggcgcccacctgcccggtgtgc
aaggaccgagcggccctcgccgacctgcgcaccaaccacaccctcaacaacctggtggag
aagctgctgcgcgaggaggccgagggcgcgcgctgggcgggccaccgttccccgcgactc
tgccgcccgcatcgtggccagttcagcctcttctgcctcgacgacaaggagctgctgtgc
tgctcgtgccaggccgacccccggcaccaggggcaccgcgtgcagccggtgaaggacact
gcccacgactttcgggccaagtgcaggaacatggagcacgcgctgcgggaaaaagccaag
gccttttgggccatgaggcgctcctacgaggccattgccaagcacaatcaggtggaggct
gcctggctggaagggcgaatccggcaggagttcgacaaactccgcgagttcctgcgcgtg
gaggagcaagccatcctggatgccatggccgaggaggcgaggcagaagcagcgtctggtg
gaggagaagatgaagcggctggcagaagacacggaagctctagcccaggagatcgagcgg
ctgcaggtggagatgaaggaggatgatgtttcttttctcatgaaacacaaaagccgaaaa
cgccgcctcttctgcaccatggagccagagcctatgcagccgggcatgctcatcgacatc
tgcaagtatctggactccctgcagtaccgcgtctggcggaagatggtcacctctgtagaa
tctgtgcctttcagcttcgatcccaacaccgcagccggctggctatctgtgtccgatgac
ctcaccagcgtcaccaaccatggctaccgagtgcaggtggagaacccggagcgcttctcc
tcagcgccctgcctgctgggctcctgcgtcttctcccagggctcccacacctgggaggtg
gacctgggggggctcccaagctggcgggtgggtgtggtgcggctgcgccaggacgccggt
gctgagggccattcacatagctgctaccacgacactcgctcgggcttctggtacgtgtgc
cgcacacagggggtggatggggaccactgcatgacctcggacccagccacgtcacccctc
gtcccggccatccctcgccgcctgcgtgtggagctggagtgtgaggagggcgagctgtcc
ttctacgacgccgagagccactgccacctctacaccttccacgcccgcttcggggaggtg
cggccttacttctacctggggggcgcgcggggggatggcccccttgagcctttacgcatc
tgtcccctgcacatcaccatcagggaggagttggatggttga
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