Lutra lutra (Eurasian river otter): 125092993
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Entry
125092993 CDS
T08100
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125092993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llv03021
]
125092993
03036 Chromosome and associated proteins [BR:
llv03036
]
125092993
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
125092993
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
125092993
RSF complex
125092993
WICH complex
125092993
B-WICH complex
125092993
NORC complex
125092993
BRF complex
125092993
NuRF complex (fruit fly)
125092993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
125092993
NCBI-ProteinID:
XP_047573505
LinkDB
All DBs
Position
2:60428375..60468785
Genome browser
AA seq
1052 aa
AA seq
DB search
MSSAAEPPPPPPPESAPSKPAASAASSVSNSSNKGGPEGVAAQAASSAGGSGPADSEMEE
VFDDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKM
KPGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKL
RDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKST
LHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKF
NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFN
SADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ
REWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVT
NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQE
SINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTK
TVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATH
VFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYR
EKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPR
LFELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQ
GFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKI
MAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLH
KLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEK
AEKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcggccgagcctccgccacccccgcctccggagagcgcgccttccaagccc
gcagcctcggccgccagcagcgtgagcaacagcagcaacaaaggcggcccggagggcgtc
gcggcccaggcggcttcctctgcgggtggctccggccccgcggactccgagatggaggaa
gtatttgatgacgcatctcctggaaagcaaaaagaaattcaagaaccagatcctacctat
gaagaaaaaatgcaaactgaccgagcaaacagatttgaatatttattaaagcagacagag
ctgtttgcacatttcatccagcctgctgctcagaagactccaacctcacctttgaagatg
aaaccagggcgcccacgaataaaaaaggatgaaaaacaaaacttgttatcggttggcgac
taccgacatcgtagaacagagcaagaggaagatgaagaactattaacagaaagctctaaa
gcaaccaatgtttgcactcgatttgaagattctccatcatatgttaaatggggtaaactg
agagattatcaggtccgaggattaaattggctcatttctttatatgagaatggcatcaat
ggtatcctggcagatgaaatgggcctgggaaagactcttcaaacaatttctcttcttggg
tacatgaaacactatagaaacattcctggtcctcatatggttttggttcctaagtctacc
ttacacaactggatgagtgaattcaagagatgggtaccaacacttagatctgtttgtttg
ataggagataaagaacaaagagctgcttttgtcagagatgttttattaccaggagaatgg
gatgtatgtgtaacatcttatgaaatgcttataaaagagaagtccgttttcaaaaaattt
aattggaggtacttagttatagatgaagctcacaggatcaaaaatgaaaaatcgaagttg
tcagaaatagtgagggaattcaagactacaaatcgactattattaactggaacacctctt
caaaacaacttgcatgagctctggtcacttcttaattttttgttgccagatgtctttaat
tcagcagatgactttgattcatggtttgatacaaacaattgccttggggatcaaaaacta
gttgagaggcttcatatggttttgcgtccatttctccttcgtcgaattaaagctgatgtt
gaaaagagtttgcctccaaagaaggaagttaaaatctatgtgggtctcagcaaaatgcaa
agggaatggtatactcggatattaatgaaggatatagatatactaaactctgcagggaag
atggacaaaatgaggttattgaacatcctgatgcagttgaggaaatgctgtaatcatcca
tatctctttgatggagctgaacctggtccaccttatacaacagatatgcatctagttacc
aacagtggtaaaatggtggtgttagacaagctgctcccgaaattaaaagaacaaggttca
cgagtcctaatcttcagtcaaatgacaagggtattggatattttggaagattattgcatg
tggagaaattatgaatactgtagattggatgggcagacaccccacgatgagagacaagag
tccatcaatgcatacaatgaaccaaacagcaccaagtttgttttcatgttaagtacacgt
gctggtggtcttggcattaatcttgctactgctgatgtagtaattttgtatgattcagat
tggaatccccaagtagatctccaggctatggaccgagcacatagaattggacaaaccaag
accgttagagtgttccgctttataactgataacactgtggaagaaagaatagtggaacgt
gctgagatgaaactcagattggattcaatagtcattcagcaaggaaggcttgtggatcag
aatctgaacaaaattgggaaagatgaaatgcttcaaatgattagacatggggcaacacat
gtatttgcttcaaaagaaagtgagattactgatgaggatattgatggtattttggaaaga
ggcgcaaagaagactgcagagatgaatgaaaagctctccaagatgggtgaaagctcactt
agaaactttacaatggatacagagtcaagtgtttataactttgaaggagaggattataga
gaaaaacaaaagattgcattcacagagtggattgaaccacctaaacgagaaagaaaagcc
aactatgctgtcgatgcctattttagggaagctcttcgtgtcagtgaacctaaagcaccc
aaggctcctcggcctccaaaacagcctaacgttcaggatttccagttttttcctccacgt
ttatttgagttactggaaaaagaaattttgtattacagaaaaactattgggtacaaggtg
cctcgaaatcctgacctaccaaatgcagcacaggcacaaaaagaagaacagcttaaaatt
gatgaagctgaaccccttaatgatgaagagttagaggaaaaggagaagcttctaacacag
ggctttaccaattggaataagagagattttaaccagtttatcaaagctaatgagaagtgg
ggtcgtgatgatattgaaaatattgcaagagaagtagaaggaaaaactccggaagaagtt
attgagtactcagctgtattctgggaaagatgcaatgaactccaggacatagagaagatt
atggctcagattgaaaggggagaggcaagaattcaaagaagaattagtatcaaaaaagca
cttgatacgaagattggacggtacaaagcaccttttcatcagctgagaatatcatatggt
actaacaaaggaaaaaactacactgaagaagaggatcgcttcctaatctgtatgcttcac
aaacttggatttgacaaagaaaacgtttatgatgaattacgacagtgtattcgcaactct
cctcagttcagatttgactggtttcttaagtccagaactgcaatggagctccagaggagg
tgtaacaccttaattaccttgattgaaagagaaaacatggaactagaagaaaaggagaag
gcagagaaaaagaagagaggaccaaaaccttcaacacagaaacgtaaaatggatggagca
cctgatggtcgaggaagaaaaaagaagctgaaactatga
DBGET
integrated database retrieval system
