Lutra lutra (Eurasian river otter): 125093246
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Entry
125093246 CDS
T08100
Name
(RefSeq) nephronectin isoform X1
KO
K06824
nephronectin
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04512
ECM-receptor interaction
llv04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125093246
04518 Integrin signaling
125093246
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Gene cluster
GFIT
Motif
Pfam:
EGF_CA
MAM
cEGF
EGF_3
FXa_inhibition
EGF
EGF_PEAR1L
EGF_MSP1_1
JAG1-like_EGF2
EGF_2
EGF_DL_JAG
hEGF
Motif
Other DBs
NCBI-GeneID:
125093246
NCBI-ProteinID:
XP_047574098
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Position
2:106280200..106356254
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AA seq
614 aa
AA seq
DB search
MDFLLALVLGSSFYLQAAAEFDVRWPRQIVSSIGLCRYGGRIDCCWGWARRSWGQCQPFY
VLRQRLARIRCQLKAVCQPQCKHGECIGPDKCKCHPGYAGKTCNQDEHFYPTPLDQGSEQ
PLFQPLDHQATSLPSRDLNECGLKPRPCKHRCMNTYGSYKCYCLNGYMLMPDGSCSSALT
CSMANCQYGCDVVKGQIRCQCPSPGLQLAPDGRTCVDVDECVTGRASCPRFRQCVNTFGS
YVCKCHKGFDLMYIGGKYQCHDIDECSLGQYQCSRFARCYNVHGSYKCKCKDGYEGDGLN
CVYIPKVMIEPSGPIHVPKGNGTISKGDGGHSNWIPDVGGTRWPLKTPYIPPVITNKPTS
KPTTRPAPRPTPEPTPPPFTELGTSPPATSPESTGTQLTPVVPVVTTSPRWITVDNRIQT
DPQKPRGDVFIPRQPSNDLFEIFEIERGVSADDEAKDDPGVLIHSCNFDHGLCGWIREKD
SDLHWEPVRDPTGGQYLTVSGAKGPGGKAARLVLPLGHLMHSGDLCLSFRHKVTGLHSGA
LQVFARKHGAHGAALWGRNGGRGWRHTHITLRGADVKSVIFRGEKRRGHTGEIGLDDVSL
RKGHCSEEREHFLN
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctcctggcgctggtgctcggctcctcgttctacctgcaggcggccgccgag
ttcgacgtgaggtggcccaggcaaatagtgtcttcgattggcctgtgtcgttatggtggg
agaattgactgctgctggggctgggcccgccggtcctggggacagtgtcagcctttctac
gtcttaagacagagactagccaggataaggtgccagctcaaagctgtctgccagccacag
tgcaaacatggtgaatgtattggacccgacaagtgcaaatgtcatcccggatatgctgga
aagacctgcaatcaagatgaacacttctacccaactcctcttgaccaaggcagtgaacag
cctcttttccaacccctggatcatcaagccacaagtttgccttcaagggatctaaatgag
tgtggcctgaagccgcggccatgcaagcacaggtgcatgaacacttacggcagctacaag
tgctactgtctcaacggatacatgctcatgccggatgggtcctgctcaagtgccctgacg
tgctccatggcaaactgtcaatatggctgtgatgttgtcaaaggacagatacggtgccag
tgcccctctcccggcctacagctggctcctgatgggaggacctgtgtggatgttgatgaa
tgtgttactggaagagcctcctgccctcgttttaggcagtgtgtcaacacttttgggagc
tacgtctgcaagtgtcataaaggcttcgacctcatgtacattggaggcaaataccaatgt
cacgatatagatgaatgctccctcggtcagtatcagtgcagccgctttgctcgatgttac
aacgtacacgggtcctacaagtgtaaatgtaaagatggatacgagggtgatggactgaat
tgtgtgtatattccaaaagtcatgattgaaccttcaggtccaattcatgtaccaaaggga
aacggtaccatttcaaagggtgatggaggacatagtaactggattcctgatgttggaggt
actaggtggcctctgaagacaccatatattcctcctgttattaccaacaagcccacttca
aagccaacaacaagacctgcacctaggccaacgccagagccgaccccacccccattcaca
gaactcggaacttcaccacctgccacaagcccggaaagcacaggcacccagctgacaccc
gtagtgcccgttgtcaccacctctcctcgatggatcacagttgacaacaggatacagaca
gatcctcagaaacccagaggagacgtgttcattccacggcagccttcaaacgacttgttt
gaaatatttgaaattgaaaggggagtcagtgcagatgatgaagcaaaggatgatccaggt
gttctgatacacagttgtaactttgaccatgggctttgtggatggatccgggaaaaagac
agtgacttgcactgggaaccagtgagagatccaacaggtggacagtatctgacagtgtcg
ggagccaaaggcccagggggaaaagccgctcgtttggtgctacctcttggccacctcatg
cattcaggggatctgtgcctgtcgttcaggcacaaggtgacggggctgcactccggcgca
ctccaggtgtttgcgagaaaacacggtgcccatggagcagccctgtggggcaggaatggt
ggccgtggctggaggcacacacacatcaccttgcgaggggctgacgtcaagagcgtcatc
ttcagaggtgagaagaggcgtggccacacgggggagatcggattggatgatgtgagcctg
agaaaaggccactgctctgaagaacgcgagcactttctgaactag
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