Lutra lutra (Eurasian river otter): 125093301
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Entry
125093301 CDS
T08100
Name
(RefSeq) integrin beta-2-like isoform X1
KO
K06464
integrin beta 2
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04015
Rap1 signaling pathway
llv04145
Phagosome
llv04390
Hippo signaling pathway
llv04514
Cell adhesion molecules
llv04610
Complement and coagulation cascades
llv04613
Neutrophil extracellular trap formation
llv04650
Natural killer cell mediated cytotoxicity
llv04670
Leukocyte transendothelial migration
llv04810
Regulation of actin cytoskeleton
llv05133
Pertussis
llv05134
Legionellosis
llv05140
Leishmaniasis
llv05144
Malaria
llv05146
Amoebiasis
llv05150
Staphylococcus aureus infection
llv05152
Tuberculosis
llv05166
Human T-cell leukemia virus 1 infection
llv05323
Rheumatoid arthritis
llv05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
125093301
04390 Hippo signaling pathway
125093301
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125093301
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125093301
09142 Cell motility
04810 Regulation of actin cytoskeleton
125093301
09150 Organismal Systems
09151 Immune system
04610 Complement and coagulation cascades
125093301
04613 Neutrophil extracellular trap formation
125093301
04650 Natural killer cell mediated cytotoxicity
125093301
04670 Leukocyte transendothelial migration
125093301
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
125093301
09171 Infectious disease: bacterial
05133 Pertussis
125093301
05134 Legionellosis
125093301
05150 Staphylococcus aureus infection
125093301
05152 Tuberculosis
125093301
09174 Infectious disease: parasitic
05146 Amoebiasis
125093301
05144 Malaria
125093301
05140 Leishmaniasis
125093301
09163 Immune disease
05323 Rheumatoid arthritis
125093301
09166 Cardiovascular disease
05416 Viral myocarditis
125093301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125093301
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
llv04147
]
125093301
04515 Cell adhesion molecules [BR:
llv04515
]
125093301
04090 CD molecules [BR:
llv04090
]
125093301
Membrane trafficking [BR:
llv04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
125093301
Exosome [BR:
llv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125093301
Cell adhesion molecules [BR:
llv04515
]
Integrins
Integrin beta subunits
125093301
CD molecules [BR:
llv04090
]
Proteins
125093301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
Integrin_B_tail
PSI_integrin
EGF_2
I-EGF_1
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
125093301
NCBI-ProteinID:
XP_047574220
LinkDB
All DBs
Position
1:1514847..1551492
Genome browser
AA seq
941 aa
AA seq
DB search
MQQEVQMQTLWGCAVPEFGNFLGSSSQHPERRTHHPHLSGTGLRPRSHLPSGGLELPSGL
SRAQWPSPAHLPAPRWARSKTDHGAPRWKGAAVLLREKTGRRGQKRLPLACKGFPGEGGA
AWNRKHRALPIRARWLIRSTVQRPGQGTNGADAPPCPARMPHRGHQGISGDMLRRRTLLL
TLGSLLCLWSALCQECTKYKVGTCRECVESGPGCAWCQKLNFTGLGEPDSVRCDTREQLL
LKGCAADDIMDPRSLAETQGDRKGSQQQLSPQKVTLYLRPGQAAAFNVTFQRAKGYPIDL
YYLMDLSYSMLDDLINVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNTHPEKLRN
PCPNKEKECQPPFAFRHVLKLTNNSNQFQREVGKQLISGNLDAPEGGLDAMMQVAACLEE
IGWRNVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNTYKRSNEFDYPSVGQLAH
KLAENNIQPIFAVTKRMVKTYEKLTEVIPKSAVGELSDDSSNVVQLIKNAYNKLSSRVFL
DHNLIPSTLKVTYDSFCSNGVSHVDQPRGDCDGVQINVPITFQVKVTASECVQEQSFLIR
ALGFTDTVTVHVVPQCECHCRDVSQDRGLCGGKGFLECGVCRCEAGYIGKNCECQTHGRS
SQELEGGCRRDNNSIICSGLGDCLCGQCVCHQSDVPNKKIFGRYCECDNVNCERYDGRVC
GGEERGTCDCGKCHCREGFEGSACQCERSTRGCLSAEGYECNGRGRCRCNVCECDAGYQP
PLCLECLGCPSPCGRYITCAQCLKFDQGPSGRNCSVECGNVGLLSAPPEKGRRCKERDLD
GCWITFTLRQRAGRDSYDIHVDDSRECVGGPQVAPIVGGTVSGVVAIGILLLAIWKILTH
VSDLREYKRFEKEKLKSQWNNDNPLFKSATTTVMNPKFAES
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggaagttcagatgcaaacgctctggggctgtgcagttcccgaatttggaaac
tttctgggctcttcatctcagcaccccgagaggcggacccatcacccccacctttcagga
actgggctgaggcctcgcagccacctgcccagcgggggcctggaactgccgtccggtctt
tccagagcccagtggcccagccctgctcacttgcctgctcctcggtgggccagaagcaag
actgaccacggggccccacgctggaaaggtgctgctgttctcttgagagagaaaacagga
agaagaggacagaaaaggctgcccctagcctgcaagggcttcccaggtgaaggaggagca
gcttggaacaggaagcaccgtgccctccccatcagggctcgctggctcatccgctcgact
gtgcagcggcccggccagggtaccaacggagctgacgcccctccctgcccagccaggatg
ccccaccgaggtcaccagggcatcagcggggacatgctgcgccggcgcaccctgctgctc
acgctggggtctctgctgtgcctctggtcggccctctgccaggagtgcaccaagtacaaa
gtcggcacgtgccgggaatgcgtggagtcgggccctggctgcgcctggtgtcagaagctg
aacttcaccgggctcggggagccagactctgttcgctgtgacacccgggagcagctcctg
ttgaagggctgtgcagctgatgacatcatggaccccaggagtctggctgagacccagggg
gacaggaagggcagccagcagcagctgtccccacagaaagtgacactctacctgagacca
ggtcaggcggctgccttcaatgtgaccttccagcgggccaagggctaccccatcgacctg
tactacctgatggacctctcctactccatgctggatgacctcatcaacgtcaagaaactg
gggggcgacctgctccgagccctcaacgagatcaccgagtccggccgcatcggctttggg
tcctttgtggacaagacggtgctccccttcgtcaacacgcaccctgagaagctgaggaat
ccgtgccccaacaaggagaaggagtgccagccccccttcgccttcaggcacgtgctgaag
ctcaccaacaactcgaaccagttccagagggaggtcgggaagcagctcatttccggaaac
ctggacgcccccgagggcgggctggacgccatgatgcaggtcgccgcgtgcctggaggaa
atcggctggcgcaacgtcactcggctactggtgtttgccacagacgacggtttccacttt
gcgggtgacgggaagctgggcgccatcctgacccccaatgatggccgctgccacctggag
gacaacacatacaagcgcagcaatgaatttgactacccgtcggtgggccagctggcacac
aaactggctgaaaacaacatccagcccatctttgcggtgaccaagagaatggtgaaaacc
tacgagaaactcaccgaggtcatccccaagtcggcggtcggggagctgtcggacgattcc
agcaacgtggtgcagcttatcaaaaacgcctacaacaaactctcctccagggtctttctg
gaccacaacctgatccccagcaccctgaaagtcacctatgactccttctgcagtaatggg
gtgtcacacgtggaccagcccagaggggactgcgacggtgtccagatcaacgtcccgatt
accttccaggtgaaggtaaccgcctcggagtgcgttcaggagcagtccttcctcatccgc
gccctgggcttcacggacacggtgaccgtgcatgtcgtcccccagtgcgagtgccactgc
cgggacgtgagccaggaccgcgggctctgcggcggcaagggcttcctggagtgcggcgtc
tgcaggtgcgaggccggctacatcgggaagaactgtgagtgccagacgcacggccggagc
agccaggagctggagggcggctgccggcgggacaacaactccatcatctgctcggggctg
ggggactgcctgtgcggacagtgcgtgtgccaccaaagcgacgtgcccaacaagaagatc
ttcgggcgctactgcgagtgtgacaatgtcaactgcgagcgctacgacgggcgggtctgc
gggggcgaggagcggggcacatgtgactgcggcaaatgccactgccgggagggcttcgag
ggctccgcgtgccagtgcgagaggtccaccaggggctgcctgagcgctgagggctacgag
tgcaacgggcgcggccggtgtcgctgtaacgtgtgcgagtgcgatgcgggctaccagccg
ccactgtgcctggaatgcctgggctgcccatcgccctgcggccggtacatcacctgcgcc
cagtgcctgaagttcgaccagggcccctcggggaggaactgcagcgtggagtgcgggaac
gtgggcctgctgagcgcccccccggaaaagggccgcaggtgcaaggagcgggatctggac
ggctgctggatcaccttcaccctgcggcagcgggcaggcagggacagctacgacatccac
gtggacgacagccgagagtgtgtggggggcccccaagtcgcccccattgtgggtggcact
gtgtctggtgttgtggccatcggcatccttctgctggccatctggaagattctgacccac
gtgagtgacctccgcgagtacaagcggttcgagaaggagaagctcaagtcccagtggaac
aacgacaacccccttttcaagagtgccactacgacagtcatgaaccccaagtttgccgag
agctag
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