Lutra lutra (Eurasian river otter): 125093391
Help
Entry
125093391 CDS
T08100
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03015
mRNA surveillance pathway
llv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125093391
09123 Folding, sorting and degradation
03018 RNA degradation
125093391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125093391
03041 Spliceosome [BR:
llv03041
]
125093391
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125093391
mRNA cycle factors
Stress granule specific factors
125093391
Spliceosome [BR:
llv03041
]
Complex C
Other components
Complex C specific factors
125093391
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
RBD_DEAH11
RRM_10
RRM_MUD2_C
RRM_occluded
RRM_MARF1
RBD_RDR6
Nup35_RRM_2
RRM_ACIN1
DUF4523
RRM_3
Motif
Other DBs
NCBI-GeneID:
125093391
NCBI-ProteinID:
XP_047574401
LinkDB
All DBs
Position
2:complement(132044844..132049357)
Genome browser
AA seq
370 aa
AA seq
DB search
MNVAAKYRQASLYVGDLNADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLK
LADAQKALDTMNFDMIKGKPIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSA
FGKILSSKVMTDDQGSRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDREA
ELQNKVNEFTNVYVKNFGDEMDDERLKEVFGKYGKTLSVKVMTDSSGKSKGFGFVSFDSH
EAAKKAVEEMNGKDINGQLLFVGRAQKKSERQAELKQMFEQLKQERFRRSRGMKLYIKNL
DDTIDDEKLWREFSSFGSISRVKIMREEGRSKGFGLICFSSPEEATKAMAEMNGRILGSK
PLYIALAHRP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtagcagccaagtaccgccaggcatccctgtatgtgggtgatctcaatgcagat
gtcaccgaggacctgctgttcaaaaagttcagcgccgtggggcctgtgctgtccatccgc
atctgcagggacctggtcacccgccgctcgctgggctatgcctacgtgaacttcctgaag
ctggctgatgcccagaaggccctggatacaatgaactttgacatgataaaaggcaaaccc
atccgtctcatgtggtctcaacgtgatgcctacttaaggaaatctggcattggaaacgtg
ttcatcaagaatctagacaaatctattgataacaaaaccctttatgaacatttttcagct
tttgggaagatcctgtcctccaaagtaatgactgatgatcaaggctctaggggttatgca
tttgtgcactttcagaaccagatcgcggctgacagggccatcgaggagatgaatggggcc
ctgcttaaggactgcaggctgtttgttggccgattcaaaaaccgtaaagatcgggaagct
gagctccaaaacaaggtcaatgaattcaccaatgtttacgtcaaaaactttggcgatgaa
atggatgatgagagactgaaggaagtttttggtaaatacggcaaaaccctgagtgttaag
gtgatgacagattccagtgggaaatccaaaggctttggctttgtgagttttgatagccat
gaggctgccaaaaaagctgttgaagaaatgaatggaaaggacataaacggacagctgctt
tttgtaggccgggcgcaaaaaaaatcagagcggcaggctgagttgaagcaaatgtttgag
cagctgaaacaggaaagatttcggagaagccggggcatgaagctctatattaagaacctc
gatgataccatcgatgatgaaaaactgtggagggaattttcttcatttggatcaattagc
agagtcaagataatgcgggaagaagggcgaagcaaagggtttgggttgatctgcttctct
tctcctgaggaggccactaaagcaatggctgagatgaatgggcgaatcttgggctccaag
ccactctacattgccctggcccacaggccctag
DBGET
integrated database retrieval system
