Lutra lutra (Eurasian river otter): 125093615
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Entry
125093615 CDS
T08100
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125093615
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
llv01009
]
125093615
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
llv04515
]
125093615
Protein phosphatases and associated proteins [BR:
llv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125093615
Cell adhesion molecules [BR:
llv04515
]
Cadherins
Protocadherins
125093615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
TMEM154
Cadherin_pro
LYRIC
KIAA1549
MLANA
EphA2_TM
Adeno_E3_CR2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
125093615
NCBI-ProteinID:
XP_047575026
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Position
2:166412541..166838141
Genome browser
AA seq
1260 aa
AA seq
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MLRMRTAGWARGWCLGCCLLLPLSLSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGGGGGGGGGGEGRRAGPADSAPYPGGGGNGASSGGPGGSKRRPDAPEGGGGI
NPGGRSSVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILR
VLITDVNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR
RLLRLDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPSI
EIRKIGRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASD
TEGDQNKKKYFLHTSAPLDYETTREFNVVIVAVDSGSPSLSSNNSLVVKVGDTNDNPPVF
GQSVVEVYFPENNIPGERVATVLATDADSGKNAEIAYSLDSSIMGIFAIDPDSGDILVNT
VLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFYVKENLQPN
SPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDREHQTTYTFRVKAV
DGGDPPRSATATVSLFVMDENDNAPTVTLPRNISYTLLPPSSNVRTVVATVLATDSDDGI
NADLNYSIVGGNPFKLFEIDSTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLV
HVFVNESVSNATVIDSQIARSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILII
LIVVMARYCRSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTVE
ASKPNGQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAG
KKHQAVQDLPPANTFVGAGDNISIGSDHCSEYSCQTNNKYSKQPFRRVTFSVVSQPQDPH
QGSLQSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENDSRPL
PDVALTGKCTRECDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAA
IMGDRNRNLLNKKLTSSYETFSAASFSKNEEANPEDIPLTKTGEYKPSPVNTLTRREVYL
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatgcggaccgcggggtgggcgcgcggctggtgcctgggttgctgtctcctc
ttgccgctctcgctcagcctggcggccgccaagcaactcctccgatatcgactggctgag
gagggcccagcggacgtccgcatcggcaacgtcgcctcggacttgggcatcgtgacgggt
tcgggtgaggtgactttcagcctcgagtcgggctcggagtacctaaagatcgacaacctc
accggcgagctgagcacgagtgagcggcgcatcgaccgcgagaagctgccccagtgtcag
atgatcttcgacgagaacgagtgctttctggacttcgaagtgtcggtgatcgggccctcg
cagagctgggtggacctgttcgagggtcgggtcatcgtactcgatatcaacgacaacacg
cccaccttcccgtcacccgtgctcacgctcacggtggaggagaaccgaccggtgggcact
ctctacctgctacccaccgccacggaccgtgacttcggccgcaacggcatcgaacgctac
gagctgctccaggagcccgggggcggtggcggcggcggcggcggcggcggcggcgagggc
cggcgcgcagggcctgccgacagcgccccctaccccgggggcggcgggaacggcgcgagc
agcggcggcccgggcggctccaagaggcggccggacgcaccagagggcggcggcgggatc
aaccccggtggccgcagcagcgtgttcgaactgcaggtggccgacaccccggatggcgag
aagcagccacagctgattgtgaagggggcgctggaccgggaacaacgcgattcctacgag
ctgaccctgcgggtgcgcgacggtggcgacccgcctcgctcctctcaggccatcctaagg
gtgctcatcaccgacgtgaacgacaacagtccccgcttcgagaagagcgtgtatgaagct
gacctagccgagaatagcgccccagggactcccatcctgcagcttcgtgccgcggacctg
gacgtgggggtcaacggacagatcgagtatgtgttcggagcggctaccgaatccgtgcgg
cggctgctgcgactcgacgagacgtccggctggctcagtgtcctgcaccgcatcgaccgc
gaggaggtgaaccagctgcgcttcacggtcatggcccgcgaccgcgggcagccccccaag
accgacaaggccacggtggtccttaacatcaaggacgagaacgacaatgtgccgtccatt
gaaatccgcaagatcgggcgtatcccactcaaggacggggtggccaacgtggccgaggat
gttctggtcgacacccccattgctctggtacaggtgtccgaccgagaccaaggcgagaac
ggggtagtcacctgcaccgtggtgggtgatgtgcccttccagctcaagccggccagcgac
acagagggcgaccagaacaagaaaaagtactttctgcacacctcggcgcctttggactat
gagaccacccgggaattcaacgtggtcatagtggcggtggactcgggcagccccagcctc
tccagcaacaactccctggttgtcaaggtaggagacaccaatgacaacccgcccgtcttt
ggccagtcagtggtggaggtgtactttcccgagaataacatccctggagagagggtggcc
acggtgctggcgacagacgctgacagtgggaaaaatgcagagattgcctactctctggat
tcttccattatggggatctttgccatcgatcctgattctggggacatccttgtcaataca
gtgctggaccgagagcagacagacaggtatgagtttaaagttaacgccaaagacaaaggc
atcccggtgctgcagggcagcaccacggtgattgtgcaggtggctgacaagaatgacaat
gaccctaagtttatgcaggacgtctttaccttttatgtgaaagaaaacttgcagcccaac
agccctgtggggatggtcacggtgatggatgctgacaaggggcgcaatgcggagatgagc
ctctacatcgaagaaaacagtaacattttttccattgagaatgacacggggaccatttac
tccacaatgtcttttgaccgggaacatcagaccacgtacacattcagagtcaaggctgtg
gatgggggagatcctcctagatccgccacagccacagtctctctctttgtgatggatgag
aatgacaatgctcccacagttacccttcccagaaacatttcctacactttactgccacct
tcgagtaatgtcaggacagtagtagctacagtgttggcaacagacagtgacgacggcatc
aatgcagaccttaactacagcattgtgggagggaatcccttcaagctgtttgagattgat
tccaccagtggtgtggtttccttagtgggaaaactcacccaaaagcattatggcttgcac
aggttggttgtgcaagtgaatgatagtgggcagccttcccagtccaccacgactctggtg
catgtgtttgtcaatgaaagtgtttctaatgcaactgtgattgactcccagatagccaga
agtttgcacaccccactcacccaggatatagctggtgacccaagttatgaaattagcaag
cagagactcagtattgtcattggggtggttgctggaattatgacagtgattctaatcatc
ttaattgtagtgatggcaaggtactgccggtccaaaaataaaaatggctatgaagctggc
aaaaaggatcacgaagacttttttacaccccagcagcacgacaaatctaaaaagcctaaa
aaggacaagaaaaacaaaaaatctaagcagcctctctatagcagcattgtcactgtagaa
gcttctaaaccaaatggacagaggtatgatagtgtcaatgagaagctgtcagatagccca
agcatggggcgataccgatctgttaatggggggcctggcagtcctgacctggccaggcat
tacaaatctagctctccattgcctactgtccagcttcacccccagtcaccaactgcagga
aaaaaacaccaggccgtacaagatctgccaccagccaacacctttgtgggagcaggagac
aacatttcaattggatcagatcactgctctgaatacagctgtcaaaccaataacaagtac
agcaaacagccatttcgtagagtgacgttttctgttgtgagtcagcctcaggacccacat
caggggtcactgcagagttgctatgacagcgggctggaggagtcagagacaccaagcagt
aagagttcatcagggccaaggctgggtgcccttccactcccagaggacaactatgaaagg
accacgccggatggcagtgttggtgaggcagagcatatggaaaatgattcaagacctctt
ccagatgtagccctgactgggaagtgcactcgtgagtgtgatgaatatggccactcagac
tcctgctggatgccagtccgcacttctccagagaggaagaagagccagcccaaactctcc
actttcatgcctgttgatgaacgaggaagccaggaaaagctggccaatggcgaggccgcc
atcatgggtgaccgcaacagaaaccttctgaacaaaaagttgacctcgtcctatgagacc
ttcagtgcagctagtttcagcaaaaatgaggaagccaaccctgaggatattccccttaca
aaaacaggggaatacaagccatctcctgtcaatactctcactagaagagaagtttacctg
tag
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