Lutra lutra (Eurasian river otter): 125093648
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Entry
125093648 CDS
T08100
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03030
DNA replication
llv03410
Base excision repair
llv03420
Nucleotide excision repair
llv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125093648
03410 Base excision repair
125093648
03420 Nucleotide excision repair
125093648
03430 Mismatch repair
125093648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llv03032
]
125093648
03400 DNA repair and recombination proteins [BR:
llv03400
]
125093648
DNA replication proteins [BR:
llv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125093648
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125093648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
BRCT_2
Rad17
RuvB_N
AAA_30
AAA_17
AAA_14
AAA_5
AAA_33
AAA_16
Zeta_toxin
AAA_19
AAA_7
nSTAND3
AAA_18
RNA_helicase
SKI
NTPase_1
NPHP3_N
TIP49
AAA_28
Motif
Other DBs
NCBI-GeneID:
125093648
NCBI-ProteinID:
XP_047575079
LinkDB
All DBs
Position
2:complement(174399422..174481980)
Genome browser
AA seq
1155 aa
AA seq
DB search
MDIRKFFGVIPSGKKPVTETVKKNEKTKSAEETLKAKKGIKEIKVNSSCKEDDSKQKQPN
KKKRIIYDSDSESEETVPVKNAKKQPEKLPLSSKPGKILRQDPVTYISETDEEDDFMCKK
AASKSKENGGSTNSYLGASNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSDKK
MVASKRKEPSQNADDSRLNDEAIAKQMQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
AQKDPGEREAFSSVQANLSKAGKHKSPHKVKTEQFSDDRKNCSPKKQTKCESLIGSQQHL
KSSPHKIGETSPKASSKVALLKKRGESSYKETEPMASKRKENAVELKGQTKTPKKPKSSP
AKKESISPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESI
ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTNIIDEDGLLNLIRT
MPGKKSKYEIAVEAEMKKEKSKLERTPQKKDQGKRKISPTKKESESKKSRLTPKKDSTTK
SPKKGTGVFWRCLDFEEQVAEETDGDSQARNLADDSSEKNKVEHLLWVDKYKPTSLKTII
GQQGDQSCTNKLLRWLQNWHRSPSADTKRAAKFGKFAGKDDGSSFKAALLSGPPGVGKTT
TASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSITGFYSTSQHGSGGTAHSLST
KHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQ
RPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQA
KADSHRAKKDIRLGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYVHVK
PVAAGGDMKKHLMLLSRAADSICDGDLVDRQIRSKQNWSLLPTQAIYASVLPGELMRGYM
TQFPTFPSWLGRHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSHMRDALVQPLTSQ
GVEGVQDVIALMDAYYLMKEDFENIMEMSSWGGKPSPFSKLDPKVKAAFTRTYNKEVHLT
PYSLQAVKTPRHSTGPALDSEYSEELNEDDSQSDEKDQDSMETDAMIKKKTKSSKPSKSE
KDKESRKGKGKSSKK
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggggttataccaagtggaaagaaacctgtaactgaaaca
gtaaagaagaatgagaaaacaaagtctgctgaagaaactttaaaagcaaagaagggaata
aaggaaatcaaggtaaatagttcttgtaaagaagatgactctaagcagaagcaaccaaac
aagaaaaagaggatcatctatgattcagattcagaatcagaggagacagtgccggtaaaa
aatgccaaaaagcaaccagaaaaattgccattgtcctctaaacctggtaaaattctacgc
caggatcctgttacatacatttcagaaacagatgaagaagatgattttatgtgtaagaaa
gcagcctctaaatcgaaagagaatggaggatctacaaatagttatcttggagcatcaaac
atgaaaaagaatgaagaaaacactaagaccaagaataaacctttatcaccaataaaactt
acccccacgtcagtgcttgattattttggaactggaagtgtccaaagatcagataagaag
atggtagcaagcaaaagaaaagagccttcacaaaacgcagatgattccagattaaatgat
gaagccattgccaagcaaatgcaacttgatgaggatgcagagctggagagacagctgcat
gaagatgaagagtttgccagaactttagccatgttggacgaagaacccaagaccaaaaag
gctcagaaggacccaggagagagagaagcattttcatctgtccaagccaatttaagtaaa
gcaggaaaacataaatctcctcataaagtaaaaacagaacaattttcagatgacagaaag
aactgcagtcccaagaagcaaactaaatgtgaaagtttgataggatctcagcaacatttg
aagtcgtcccctcacaaaataggagaaacttctccaaaagccagttccaaggtggccctt
ttgaaaaaaaggggagagagttcttataaagaaacagagcctatggcttcaaaaagaaaa
gaaaatgctgttgaattaaaaggacagacaaaaactcctaagaaacccaaaagttctcca
gctaaaaaagagtctataagtcctgaagattctgagaagagacgcactaattatcaagct
tatcgaagctacttaaatcgagaaggtcccaaagctctgggctccaaagaaataccgaag
ggagctgaaaattgcttggaaggccttacatttgtaatcacaggagtgctggagtccatt
gaacgagatgaggccaagtctctaattgagcgttatgggggaaaagtaacaggaaatgtc
agcaagaaaacaaactaccttgtcatgggtcgtgatagtggacagtccaagagtgataag
gcagcagctttggggacaaatattattgatgaagatggcctgttgaatctgattcgaact
atgccaggcaagaagtctaagtatgaaatagcagttgaagctgagatgaagaaagaaaag
tccaaattggaaagaacacctcaaaaaaaagaccaaggaaaaagaaaaattagcccaact
aagaaggaatcagaatccaaaaaaagcagactgactcccaaaaaggacagcactacaaag
tctccaaaaaagggaacaggtgtgttttggagatgcctggacttcgaggagcaggtggct
gaggagacagacggtgacagccaggctaggaatttggctgatgacagcagtgaaaaaaac
aaagtggaacatttgctctgggtggataaatacaagccaacctcgctcaagaccataatc
ggacagcaaggtgaccagagctgcaccaacaaactcctccgctggctccagaactggcac
aggagtccgtccgcggatacgaaacgcgcagcaaagttcggtaaatttgctggcaaagat
gatggctctagttttaaagcagcgctgctctcaggccctccaggtgttggcaagacaacc
acagcttctctggtttgtcaggaattgggatatagctacgtggaactgaatgcaagtgac
actcggagtaagaacagtttgaaggagattgttgctgaatcactgaataataccagcatc
acaggcttttattcaacttctcagcacgggtcaggcggaacagcccattcattaagcacg
aaacatgctctcatcatggatgaagtagatggcatggcaggcaatgaggacaggggagga
attcaggaattaattggtctgataaaacatacaaaaattcccattatttgtatgtgcaat
gatagaaatcatcccaagattcgctctttggttcattattgttttgatcttcgttttcaa
agacctcgagttgaacagattaagggtgctatgatgtctattgcatttaaagagggtttg
aagatcccccctccggctatgaatgaaataattttgggagccaatcaagatatcagacag
gttttacacaatctgagtatgtggtgtgcacgaagtaaggccctaacctatgaccaggcc
aaggctgattctcatagagccaagaaggatatcagactgggcccatttgatgttgcccgg
aaagtgtttgcagctggagaggagaccgctcatatgtcacttatggacaagtcagatctc
ttctttcatgattattcgatagcacccctctttgtccaggagaactacgtacacgtgaag
cctgtggctgcagggggagacatgaaaaagcacttgatgcttttaagcagagcagcagac
agcatatgtgatggtgatctagtggaccgtcagatccggagtaaacagaactggagtctc
ctgcccacgcaggccatttatgccagtgttcttcctggagagttaatgagggggtacatg
actcagtttccaaccttcccaagctggttggggaggcactcatctaccggcaaacacgat
cgtattgtgcaggacctagcacttcacatgagtctcaggacttactccagcaaaaggact
gtaaacatggattacctgtcccatatgagggatgcacttgtacagcccttgacctcacaa
ggggtagaaggagtacaggatgtcattgctcttatggacgcctactacttgatgaaagaa
gactttgagaatatcatggaaatgagcagctggggaggcaaacctagtcccttctccaag
ctggatcccaaggtgaaagcagccttcacgagaacttataataaggaagtccacctcact
ccatattcccttcaggctgtaaagacacccagacacagcacaggccccgcgctggattct
gaatacagtgaagagttaaatgaagatgactctcaatctgatgagaaagaccaagactct
atggaaactgatgcaatgatcaagaaaaagacaaaatcttcaaagccttcaaaatcagaa
aaagataaggagtccaggaaaggaaaaggaaaaagttcaaagaaatga
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integrated database retrieval system
