Lutra lutra (Eurasian river otter): 125093669
Help
Entry
125093669 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: LIM and calponin homology domains-containing protein 1-like
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
llv04990
]
125093669
Domain-containing proteins not elsewhere classified [BR:
llv04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
125093669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
125093669
NCBI-ProteinID:
XP_047575136
LinkDB
All DBs
Position
2:176183429..176509489
Genome browser
AA seq
1626 aa
AA seq
DB search
MACPTLGLEALQPLQPEPPPEPAFSEAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNIILFLRGCKELGLRESQLFDPSDLQDTSNRVTVKSLDYS
RKLKNVLVTIYWLGKAANSSASYSGTTLNLKEFEGLLAQMRKETDDIESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSEPDLPHR
KLPDVKKDDMSARRTSHGEPKSAVPFNQYLPNKSNQTAYVPAPLRKKKAEREENRKSWNT
ATSPLGGERPFSYPETIEEEGSEVGSPCEEDPVGPVDPGGKTSDGGLELPTGSGQEQPSP
XGAVGAPAPKSEGKDAVEIQKRRRLEQAGIKVMPAAQRFASHKPLNNEKEAVHDIILRKE
NPFLTHQCGKDSESEEEVARQRPDLEKDDFAARRVRMNQTKPAVPLNQLLYGPYRKKEAE
KSESGKQLSKEISEKKSLEYKRNQGQEVKSVVACITRTQESKPAEEGVRKVPDLYRDDLA
QRRIQGLLGPHQEAPRFVTVSNITEADLETWERLKVSVKTRDGDVEPICAPEPAPEIKAE
TAIRDDFASRKARAYKKASSPQQKFVHFGPVTEIDQQKWKRLSIGRAGPREDVEGVLSRG
SKTETNSVSPSSAATSSLGKDQMLTAQHDHRIVNSGVGDCCKRVSWLGPILETQEEHVCG
LSEHPGAEEATCRQLPQDGKEEKEGVAQRDSEMPPKAEPSEESGQPLVCPLASECNTSGT
EESSERMTAPAWSSSRPKGPGKLYDSQKDDMMVRRTGMCLRRVGANVNQFLPVPFAKRQD
VEESAGGPPLKDKRYGPRTPVSDDVESTSMFDMRCEEEATVQPHSRARQEQLQLINNQLR
EEDDKWQDDLARWKSRRRSASQDLIKKEEERKKMEKLLAGEDGTSERRKSIKTYREIVQE
KERRERELHEAYKNARSQEEAEGILQQYIERFTISEAVLERLEMPKILERSHSTEPNLTP
FLNDPSPMKYLRRQSLPPPKFTATVETTIARTSVLDTSTPAGSGSPSKTVTPKAVPMLTP
KPYSQPKNSQEVLKTFKVDGKVSMNAETVHGDKTEKEKECPAVAPAPSLTKSQMFEGVAR
VHGSLVELKQGNSSIEISIKKPNSVAQELRATTEETEQNSQEDVNDGEKPQKGNTELAPS
EPQHFTTTVTRSSPTVPFVEFSSSAQLKNDAPEEKDQKKVEDEMSGKVELVLSQKVAKPK
SPEPEATLTYPFLDKMSETNQLHLPNLYSQVDSPGSEKSPVTTPFKFWAWDPEEERRRQE
KWQQEQERLLQERYQKEQNKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTLSSSS
ADQLSTSSSVTEGSGKMNKMDLENGREEEQETRRRKPLQGDNSDLLHNPREDWPPEEAGS
LTQGALAHSKNPVWEGGHQDQQLDTETGALHCGMNSQLAQDPSQSQQVSNPSTHILEDVK
PKTLPLDKNINHQIESPGERRKKSPRETFQAGHLSPCSPTPPGQSPNRSISGKKLCSSCG
LPLGKGAAMIIETLHLYFHIQCFRCGICKGQLGDAVSGTDVRIRNGLLNCNDCYMRSRSA
GQPTTL
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtcccactctgggtctggaagctcttcagcctctgcagccggagccgcccccc
gagcctgctttttcggaggcgcagaagtggatcgagcaagtaactggcagaagttttggt
gataaagattttcggacgggtttagaaaatggaatccttctctgcgagttgctgaatgct
ataaagccaggacttgttaaaaagatcaatagattgcctacccccattgcgggattggac
aatatcatcttgttcttaagaggttgtaaagagcttggccttagagaatctcaacttttt
gaccctagtgacctacaggatacgtctaacagagtaacagtcaagagccttgattacagt
aggaaactgaaaaatgtattagttaccatttattggctgggaaaagcagcaaatagctct
gcgtcctatagtggcacgactctgaacctgaaggagttcgaaggcttgctggctcagatg
agaaaggagaccgacgacattgagagtcctaaacgtagtatccgagacagtggctacata
gactgctgggattctgagcgcagcgactccctgtctccccctcgccacggcagagatgac
tccttcgacagcctggattccttcggctcccgttcccggcagaccccttcaccagatgta
gtcctcaggggaagcagcgatgggagaggaagtgactctgaacccgacttgccccaccgg
aagctgccggatgtgaagaaggatgacatgtctgcgaggcggacttcccatggtgagccg
aaatcagcagtgccttttaaccagtacctcccgaacaaaagcaatcagacggcctacgtc
cccgctcctctgaggaagaagaaagcagagcgagaggaaaatcggaagagctggaatact
gccacctcccccctcggtggggagaggcccttcagctatcctgaaacaatagaggaagag
ggaagtgaagtggggtctccttgtgaagaggacccagtcggcccagtggatcctggtggg
aagacttccgatggtgggttagaattacccacgggcagtggtcaggagcagccttctcca
ngaggggctgtgggtgccccagctcccaagtctgaaggaaaagatgctgttgaaatccaa
aagcgcagaaggctagaacaagctggaatcaaggtcatgcccgcggcacagcgctttgcc
agtcacaagccattaaataatgagaaagaagctgttcatgacattatccttcgcaaagaa
aaccctttcctgacccaccaatgtggcaaagattcagagtcagaagaggaagttgcgcgt
cagcggcccgatcttgagaaagatgactttgctgcaaggagagtgaggatgaaccagacc
aagccagcagtgccattgaaccaactcctctatgggccttaccgaaaaaaagaggcagag
aaatcagagagcggcaaacagctctcaaaggaaatttcagaaaagaaaagtctagaatat
aaaaggaaccagggccaagaggtgaagtcagtggtggcctgtattactcggactcaggag
agcaaaccggcagaagagggagtgaggaaggtgccagatctttacagggatgacctggct
cagcggagaattcagggcctcctcggccctcaccaagaggctccaagatttgtcacagtc
tccaatatcaccgaagcggacttggagacgtgggagagactgaaagtgtcagtaaagacg
agggatggagatgttgagcccatctgtgcccctgagcctgcaccagaaattaaagcagaa
actgccattcgtgatgattttgccagccgcaaagcgagggcctataagaaagcttccagc
cctcagcaaaagtttgtgcactttggacccgtgacagagatagatcagcagaaatggaag
cggctcagcatcggccgggctgggcctagggaggacgtggaaggagtcctcagtcgtggc
agcaagaccgaaactaactctgtctccccttcctccgcggccacgtccagtttaggaaaa
gaccaaatgcttactgcacagcatgaccacagaatagtgaattctggcgtaggggactgt
tgcaaaagggtgtcgtggctgggtcccatactggagacccaggaggagcacgtctgcggt
ttgagcgagcacccaggagcggaggaagcgacgtgcagacagctgccgcaggatggcaag
gaagagaaggaaggagttgctcaaagagattctgagatgccgccaaaggctgagccatca
gaggagagcggccagccacttgtgtgtcccctggcctccgaatgcaacacctcggggaca
gaagagagctcagagaggatgacagctcctgcctggagcagcagcagaccgaaaggccca
ggaaagttgtatgactcacaaaaagatgacatgatggtcagaagaaccgggatgtgtctt
agacgcgtgggagccaacgtaaaccagttccttccagttccatttgcaaagcggcaggat
gtggaggaatctgccgggggtccgccgttgaaggataagagatacggtccgagaactcct
gtgtctgatgacgtagagagcacgagtatgtttgacatgcggtgtgaggaggaggccacg
gtgcagccgcacagcagggcccgccaggagcagctacagctgataaataaccagctgcgg
gaagaggacgacaaatggcaagatgacctggctcgctggaagagccgtagaagaagtgct
tctcaggacttaatcaagaaagaggaagaaagaaagaaaatggagaagttactggctgga
gaggacggaacaagtgaacgaaggaaaagcatcaaaacctacagagaaattgttcaagaa
aaagagcggcgagagagggagttgcatgaagcctataagaacgcacggtcccaggaagag
gcagaggggatccttcaacaatacattgagcggttcaccatcagcgaggctgttcttgaa
cgcttggagatgccaaaaattctggaaagaagccattccacagagccaaatttaaccccc
ttcctgaatgaccccagccccatgaagtacctgcggcgacagtcactgcccccacccaag
ttcactgccaccgtggagaccaccattgctcggaccagcgttctggacaccagcacgcca
gcaggcagcgggtctccaagcaaaactgtcacccccaaagctgtgcctatgctgacaccc
aagccttattcccagcccaaaaactcgcaagaggttctgaagacctttaaggtagatggg
aaagtcagcatgaatgcagaaacagttcatggtgacaagacggagaaggagaaagaatgt
cccgcggtggcccctgccccctccttaaccaaatcccagatgtttgaaggtgtggccaga
gtgcatgggtccctggtggagctcaaacaaggcaacagtagcattgagatcagcataaag
aagccaaattctgttgcccaggaactaagagcaaccactgaggaaactgaacagaacagt
caagaggatgtaaatgatggcgaaaaaccacagaaaggaaatacggaacttgccccatca
gagccacagcattttacgacaaccgtgacccgatccagcccaaccgtgccctttgtggag
ttttcctccagtgcccagctgaagaacgatgcaccagaagaaaaagaccagaagaaagtg
gaagatgagatgagtggaaaggtggagttggtgctgtcacaaaaggtggcaaagccaaaa
tcaccagaaccagaagcaaccctgacgtatccatttctggacaaaatgtctgaaaccaac
caattacacttgccaaatctctattctcaagtggattctccaggcagtgaaaagtcacct
gtaactacaccttttaagttctgggcatgggacccagaagaggagcgccggcgacaggaa
aaatggcaacaggagcaggaacgtttgcttcaggagagataccagaaggaacagaacaag
ctaaaagaagagtgggaaaaggcccagaaggaggtggaagaggaggaacgcagatactat
gaggaggagcgcaaaataattgaagacaccgtggttccatttactctttcttcaagttct
gcagaccaactatctacatcctcctctgtgactgaaggcagtgggaaaatgaataagatg
gacttggaaaatggtcgagaggaagaacaagagacaagacggaggaagccactccaggga
gacaacagtgatttattgcataaccctcgggaagattggccaccagaggaagctggcagc
ctaactcaaggggccttggctcattctaagaatcctgtatgggaaggaggccatcaggac
caacagttggatacagaaactggggccctacactgtgggatgaactcacagctagctcag
gatccatcccagagtcagcaggtatcaaacccatcgacgcacattctagaagatgtgaag
ccaaaaaccctccctttggataaaaacattaaccatcagatcgaatctccgggtgaaaga
cggaagaaaagccctcgagagactttccaggctgggcacttgtccccctgttctcccacc
cctcctggccaatcaccaaacaggtctatcagcgggaagaagctgtgctcgtcctgtggg
ctccctctgggcaaaggagccgccatgatcatcgagaccctccatctctatttccacatc
cagtgctttaggtgtgggatttgtaaaggacagcttggagatgcagtgagtgggacggat
gttaggattcgaaatggtcttctgaactgtaatgattgctacatgcgatccagaagtgct
ggccagcccacaacattgtga
DBGET
integrated database retrieval system
