Lutra lutra (Eurasian river otter): 125093734
Help
Entry
125093734 CDS
T08100
Name
(RefSeq) high mobility group protein B1-like
KO
K10802
high mobility group protein B1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03410
Base excision repair
llv04140
Autophagy - animal
llv04217
Necroptosis
llv04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125093734
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125093734
09143 Cell growth and death
04217 Necroptosis
125093734
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
125093734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125093734
03400 DNA repair and recombination proteins [BR:
llv03400
]
125093734
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
llv04147
]
125093734
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
125093734
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
125093734
MMR (mismatch excision repair)
Other MMR factors
125093734
Exosome [BR:
llv04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
125093734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
RNA_pol_3_Rpc31
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
125093734
NCBI-ProteinID:
XP_047575287
LinkDB
All DBs
Position
2:186127181..186128383
Genome browser
AA seq
212 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVPTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRSPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKKKCEKDIAAYRAKGKPDVTKKGVVKAEK
SKKKKEEEEDEEDEEEEEEDEEDEDEEEDDDE
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
ccaacttgccgagaggagcacaagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagaaaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagacatggcaaaggctgacaaggcccgttatgaaagagaaatgaaaacttatattccc
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggtctccttcg
gcctttttcttgttttgttctgagtatcgccccaaaatcaaaggagaacatccaggccta
tccattggtgatgttgcaaagaaactgggagaaatgtggaataacactgctgcagatgac
aagcagccttatgaaaagaaggctgctaagctgaagaaaaaatgtgaaaaggatattgct
gcataccgagctaaaggaaagcctgatgtgacaaaaaagggagttgtcaaggctgaaaag
agcaagaaaaagaaggaagaggaggaggatgaggaagatgaagaggaggaggaggaagat
gaagaagatgaagatgaagaagaagatgatgatgaataa
DBGET
integrated database retrieval system
