Lutra lutra (Eurasian river otter): 125094679
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Entry
125094679 CDS
T08100
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125094679
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
llv01009
]
125094679
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
llv04515
]
125094679
Protein phosphatases and associated proteins [BR:
llv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125094679
Cell adhesion molecules [BR:
llv04515
]
Cadherins
Protocadherins
125094679
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
125094679
NCBI-ProteinID:
XP_047576061
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Position
3:complement(156212681..156218429)
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AA seq
950 aa
AA seq
DB search
MRGRGNARSSPALAVSWRPAIWHPRLDMGRLSRPRSSTSHRNLPHLFLFFLFVGPFNCLA
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLVPRAAGRQDQLSQLPALAERNPPLSFSLA
SRGLSGQYVTLDNRSGELHTSAQEIDREALCLEGGGGAAWGGSISISSSPSSDSCLLLLD
VLVLPQEYFRFVKVKIAIRDINDNAPQFPVSQISVWVPENAPINTRLAIEHPAMDPDVGT
NGVQTYRLLDYHRMFTLDVEENENGERTPYLIVMGLLDRETQDQYVSIIIAEDGGSPPLL
GSATLTIGITDINDNCPLFTDSQINVTVFGNATVGTPVAAVQAVDRDLGTNAQITYAYSQ
KVPQASKDLFHLDETTGVIKLFSKIGGSVLQTHKLTILANGPGCIPAVTTALVTIIKVIF
RPPEIVPRYIANEVDGIVYLKELEPINTPIAFFTIRDPEGKYKVNCYLDGEGPFRLSPYK
PYNNEYLLETTKLMDYELQQFYEIAVVAWNSEGFHVKKIIKVQLLDDNDNAPIFLQPLLE
LTIEENNAPNAFLTKLYATDADSGERGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDREE
KEKYRYTVRAVDSGRPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIGVI
SVTDADAGRNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGEPA
LSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAVIA
YSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVNL
FVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVESLSCVPTLVALSVISLGSL
TLVTGMGIYICLRRGKKHHREDENLEVQIPLKGKIDLHMRERKPMAISNI
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgagggaatgcgcgcagctcgccggccctggcagtgagctggcgcccggcg
atctggcacccgcgcctggatatggggcgtctcagtcgtcccaggagcagcaccagccac
agaaacctgccgcatttgtttctgtttttcctcttcgtgggacccttcaactgcctcgcg
agttacagccgggccacggagcttctgtacagcctgaacgagggactgcccgcgggggtg
ctcatcggcagcctggcggaggacctgcggctggtcccccgcgctgccgggaggcaggac
cagctgtcgcagctgcccgccctggctgagcggaacccccctctctccttcagcctggcc
tcccggggactgagtggtcagtacgtgaccctagacaaccgctccggggagctgcacact
tcggcccaggagatcgacagggaggccctgtgtcttgaaggaggtggaggagctgcctgg
ggcggcagtatttccatctcctcctccccttcctctgactcttgtcttttgcttttggat
gtgctggtcctgcctcaggaatactttaggtttgtgaaggtgaaaatcgctatccgggac
atcaatgacaatgccccgcagttccccgtttcccaaatctcggtttgggttccagaaaat
gcacctataaacactcggctcgccatagagcatcctgccatggacccagatgtaggcacg
aacggagtgcagacctaccgcttactggactaccaccgcatgttcacgctggatgtggag
gagaatgagaatggggagcgcactccttacctaattgtcatgggactgctggatagggag
acccaagaccagtatgtgagcatcatcatagcagaggatggtgggtctccaccactgttg
ggcagcgccaccctcaccatcggcataactgacattaatgacaattgccctctcttcaca
gattcacagatcaatgtcactgtgtttgggaatgctacagtgggcacaccggttgcagct
gttcaggctgtggatagagacttgggaaccaatgctcagatcacctacgcttacagccag
aaagttccacaagcatccaaggatttattccatctggacgaaaccaccggagtcattaaa
cttttcagtaagattgggggaagtgttctgcaaacgcacaagctcaccatccttgctaac
gggccaggctgcatccctgctgtgaccacggccctggtgaccatcatcaaagtcattttc
agaccacctgaaattgttcctcgttatatagccaatgaggtagacggtattgtttacctg
aaagaactggagcccattaacactccaattgcattcttcaccataagagatccagaaggt
aaatacaaggtgaactgctacctggacggtgaaggaccatttaggttatcaccctacaaa
ccatacaataatgaatatttgctggaaaccacaaaactgatggattatgagctacagcag
ttctatgaaatagctgtggtggcctggaactcagagggatttcatgtcaaaaaaattatt
aaagtgcaacttttagatgacaatgacaatgctcctattttcctgcaacccttgctggaa
ctaactatcgaagaaaataatgcgcccaatgcctttttgacaaagttgtacgcgacggat
gctgacagtggagagagaggccaagtttcctatttcctgggacctgatgccccctcatat
ttttccttagacagtgtcacaggaattctgacagtttccactcagctggaccgagaagag
aaagaaaagtataggtacacagtcagagctgttgactctgggaggccacccagagaatca
gttgccactgtggctctcaccgtgctggataaaaatgacaacagccctaggttcatcaac
aaggacttcagcttttttgtgccagaaaactttccaggatatggtgaaattggggtaatt
agtgtcacagatgctgatgctggacgaaatggttgggtagccctctcggtggtgaaccag
agtgatatttttgtcatagacacaggaaagggcatgttgagagctaaagtctctttggac
agagagcagcaaagctcctacactttgtgggtcgaagctgttgatgggggtgagcctgcc
ctctcttcgactgcaaaaatcacaattctccttctagatatcaatgacaaccctcctctg
gtcttatttcctcagtccaacatgtcctacctgttggtactgccttctactctccccggc
tccccagttacagaggtctatgctgttgacaaagacacgggcatgaacgctgtcatagct
tacagcatcataggaagaagaggtcctaggcctgagtcctttaggattgaccctaaaact
ggcaatattactttggaagaggcattgctgcagacagactatggacttcatcgtttactg
gtgaaagtgagcgaccatggttacccagaacctctccattccacagtcatggtgaactta
tttgtcaatgacactgtcagtaatgagagctacattgagagtcttctaagaaaggaacca
gaaatcaacatagaggagaaagaaccacagatctcaatagaaccaactcataggaaagtt
gagtctctgtcctgtgtgcccactctagttgctctctctgtaataagcttgggttctctc
acacttgtaacagggatgggcatatacatctgcttaaggagagggaaaaagcatcacagg
gaagatgaaaatttggaagtacaaattccactcaaaggaaaaattgacttgcatatgaga
gagaggaaaccaatggctatttctaatatttga
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