Lutra lutra (Eurasian river otter): 125094706
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Entry
125094706 CDS
T08100
Name
(RefSeq) LIM domain only protein 7-like isoform X1
KO
K06084
F-box protein 20
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125094706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125094706
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125094706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
LIM
PDZ
PDZ_2
PDZ_6
PAZ_4
Motif
Other DBs
NCBI-GeneID:
125094706
NCBI-ProteinID:
XP_047576099
LinkDB
All DBs
Position
3:169151138..169282069
Genome browser
AA seq
1563 aa
AA seq
DB search
MQDYNKDDMSYRRISAIEPKSALPFNRFLPNKSRQPSYVPAPLRKKKPDKNEDNRRSWAS
PVYPEADGTFPSGHTDSPLISHQISRAEWDLSNATCGQKEVYGSESGSDSEDERRLPDIV
LDDLANRRFRVKKRPECFTSKTTSRSSYSPRFPPADTLASGPYALTSNERRTWGRNVENW
PRVQEASKSSCYLEVEEEKTSLPNTIKDDLYVRKLSPVMPNPGNAFDQFLPKCWIPEDVN
WKRIKRETYRPWYKEFQGFSRRNSDSEDEDLGSDRSSSFFSRIQKAKHRLDSSCQRRSLL
LELATKGARTSRDTHAARRSGSASEEPSQFLLLQALQTYSDDILSSETNIKIDPTAGPRL
ITRRKNLSSAPGYKRDDLEMSTLDPDLENDDFFVRKTGAFHANPYVLRAFEDFRRFSEQD
DPVERDIILQCREGELVLPDLEKDDMIVRRIPAQKKEVPLSGAPDRYQPVPFPEPWTLPP
EIQAKFLCVLERTRPPKEKRKSCRVLVPSYRQKKDDMLTRKIQSWQLGTTVPPVSFTPGP
CSEADLRKWEAIREASRLRHRKRLMVERLFQKIYGENGSKSMSDVSAEDVQNLRQLRYEE
MQKIKSQLKEQDQKWQDDLAKWKDRRKSYTSDLQKKKEEREEIEKQALEKSERSSKMFKE
MLQDRESRNQTSTVTLRRRLHSSDDILHEEMLSPTLTMSEASYQSERVEEKGTAYSTEIP
KQDSTTFAKREDAAAAGVHLPSKSPIKEQVPDSLSSQPSLTTQRESTRVSASLPRSYQKT
DTARLTSVVTPRPFGSQARGISSLPRSYTMDDSWKYNGNVEDAKRTQNSLVSTSVQRPDL
SQLVSSKSSERERAEVGEGVTGLPSPTPSFSSLSQDQADTSRATLSSTSGPDLTSEFGEG
GSSPQMEDSRSQDQFSDMRISINQMPGSGLDFGFTVKWALSGIFVASVEAGSPAEFSQLQ
VDDEIIAINNTKFSYKDTKEWEATMASAKETGKLVMDIRRHGKSGSPETKWIDTTSGIYN
SDKSSSLSITTDFSESLQHSSTESKEMNGIRDETTTFESKASEPISLKNLKRRSQFFEQG
SSCFSYSSWVYLCGSSDSVVPDLPVPTLSAPSRWAWDQEEERKRQERWQKEQDRLLQEKY
QREQEKLREEWQRAKQEAERENYKYLNEERMVLSSNSISLPTREPTAAAWEASWGEGSKS
SDQEGSRAGEEETREPPKDDAEEDQRKKLQERLALEEERKLREQQCQQEQEQKWQQEAAQ
EQTRPAERERETSVKIYQYRRPVDSYDIPKREEKSSGLLPSDRNKSRSTTELDDYPTNKN
GGNKYLDQIGSTSSSQRSSKKEQVPSEAELERQQILQEMRKRTSLLNDSSWIRQRSSSVN
KEPICLPGIMRRGESLDNLDSPRSNSWKPSPWLNQSSGVRASSSVQDFSRPPPQLVSTSN
RAYMRNPSSSIPPPSAGSVKTTTAPSPTPRSHSPSASQPSSQLRNRSVSGKRVCSYCNNI
LGKGAAMIIESLGLCYHLHCFKCVACSCDLGGSSSGAEVRIRNHQLYCNDCYLRFKSGRP
TAM
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattataataaagatgatatgtcctatcgaaggatttcagccattgaaccaaaa
tctgctttaccgttcaatcgttttttgcccaataaaagtagacagccatcctatgtgccg
gcgccattgaggaagaaaaagccagacaaaaatgaggataacagaagaagttgggccagc
ccggtgtatccagaagcagatggaacatttccaagtggacacacagacagtcctttaatt
tcccatcaaattagcagagcagagtgggatttgtcaaatgcaacttgcggtcagaaggaa
gtgtatggttctgaaagtggttcggactccgaggatgaacgaaggttgcctgatatagtt
ttggatgacttagccaaccgtagattccgagtgaaaaagaggcccgagtgtttcacatcg
aaaaccacctctcgtagctcttattcaccaaggtttcctcctgctgacacattagcctct
gggccgtacgcactgacgagtaacgagaggagaacttggggcagaaatgtggagaactgg
ccaagagtacaagaagcttcaaagtcctcttgttacttggaagtggaagaagaaaagaca
agcttgcccaacaccatcaaggatgatctttatgtgcgaaagctaagtccagtcatgcca
aacccagggaatgcttttgatcagtttcttcccaaatgttggatcccagaagatgtgaac
tggaaaagaataaaaagagaaacttacagaccatggtataaagaatttcagggattcagt
aggaggaattcagattctgaggatgaggatttgggctcggacagaagctcctcctttttt
agtagaatccaaaaagcaaaacataggctagacagcagctgccaaagacgttcactcctg
ctggaattggctaccaaaggggccaggacctcccgggacacccatgcagccaggagaagc
ggcagtgcctccgaggagcccagtcagtttttattacttcaggcactccaaacatactct
gatgacatcttatcttctgaaacaaatatcaaaattgatcccactgctggcccaaggctc
ataacacgcagaaagaatctctcttctgcaccggggtataaaagagatgaccttgagatg
tcaacccttgatcctgacttagagaatgatgatttctttgtcagaaagactggagctttc
catgcaaatccatatgttctccgggcttttgaagactttagaaggttttccgagcaagat
gatcctgtagagcgagatataattctgcagtgtagagaaggtgaacttgtacttccagat
ctagaaaaagatgatatgattgttcgccgaatcccagcacagaaaaaagaggtgcctcta
tcaggggccccagatagataccaaccggtccctttccccgaaccctggactcttcctcca
gaaattcaagcaaaattcctctgtgtacttgaaaggacgcgcccacccaaagaaaaaagg
aagagctgtagagtattagtgccttcctacaggcagaagaaagatgacatgttgactcgc
aagatccagtcttggcaactggggacgactgtgcctcctgtcagtttcacccctggtccc
tgcagtgaggcggacctccggaagtgggaggccatccgggaggccagcagacttaggcac
aggaaacggctgatggtcgagagactctttcaaaagatttatggtgagaatgggagtaag
tccatgagtgatgtcagcgcggaggatgttcagaacttgcgtcagctgcgttacgaggag
atgcagaaaataaaatcacaattaaaagaacaggatcagaagtggcaagatgaccttgca
aaatggaaagatcgtcgaaaaagctacacttcagatctgcagaagaaaaaggaagagagg
gaagaaatcgaaaagcaggcactcgagaagtctgagagaagctctaagatgtttaaggaa
atgctacaggacagggaatcccgaaatcaaacgtccacagttaccttgaggaggaggttg
cattcttctgatgacatattgcatgaagagatgctttcccctacactgaccatgtcagaa
gcaagttaccagagtgagagagtagaagagaagggaacagcatattctacagaaattcct
aaacaagattccacgacgtttgcaaaaagagaagatgctgcggccgctggcgttcacctt
ccttctaaaagccccatcaaagaacaagtcccagactctttgtcctctcagccttcactg
acgacacaaagagagtcgactcgagtttcagcctctctccccagaagttaccagaaaact
gatacagccaggttaacatctgtggtcacaccgagaccttttggctctcaggcaagggga
atctcatcactcccaagatcctacacgatggatgactcttggaagtataacggaaatgta
gaagatgctaagagaactcagaacagtctggtcagcacctctgtgcagagacctgaccta
agccagctcgtttccagcaagtccagcgagagagagagagctgaggtgggagaaggtgtg
acagggctgccgtcccctacaccctccttctcatccctttcccaggaccaggctgacact
tccagagccacactgtcttccacatctggccccgatttaacgtctgagtttggagaaggg
ggaagctcaccacaaatggaggactcaagatcacaggatcagttcagtgatatgagaatc
agcataaaccagatgcccgggagcggtcttgactttgggtttacagtaaaatgggcattg
tctgggatcttcgttgcatcagtcgaagcaggtagcccagcagaattttcccagctacag
gtagatgatgaaattattgctattaacaacaccaagttttcatataaggacacaaaagag
tgggaggcaaccatggctagtgctaaagaaactggaaagctagtaatggatatcaggcgc
catggaaagtctggttcacccgaaacaaagtggattgatacaacttctggaatttacaac
tcagacaaatcttcaagtctgtcaataacaactgatttctcagagagcctccagcattct
agtactgaatccaaggaaatgaatggaattcgtgatgaaactactacttttgaatcaaaa
gcatctgaacctatttctttgaaaaacttaaaaaggcgatcacaattttttgaacaaggg
tcatcatgcttttcttacagttcatgggtctacctctgtggaagctcggattctgtagtt
cctgatcttccggttcccaccctcagtgccccgagccgctgggcgtgggatcaggaggag
gagcggaagcggcaggagaggtggcagaaggagcaggaccgcctgctgcaggaaaaatat
caacgtgagcaggagaaactcagggaagagtggcaaagggctaagcaggaagctgagaga
gagaattacaagtacttgaatgaggagcgaatggtcctgagctcaaacagcatttctctg
cccacgcgggagcccaccgcggccgcctgggaagcctcctggggtgaggggtccaagtcg
tccgaccaggaaggtagccgagcaggggaagaggagacgagagagccgcccaaggacgac
gcagaggaggaccaaaggaagaagctgcaggagcgcctggctcttgaggaagagaggaaa
ctgagggagcaacagtgtcagcaagagcaggagcagaagtggcagcaggaggcggcccag
gagcagacccgcccggcagagagagagagggagacttcagtcaagatataccagtataga
agacctgttgattcctatgacataccaaagagagaggaaaaatcttcagggttgcttcct
agtgacaggaacaaatccagatccacaactgagctggatgattaccctacaaataaaaat
ggaggcaataaatatttagaccaaattgggagcactagctcatcacagaggagttccaag
aaggaacaagtcccatcggaagcagaattagagagacaacaaattcttcaagaaatgagg
aagagaacatctcttctcaatgacagcagctggatccgacagcgcagttccagcgtaaat
aaagagcccatttgtctacctgggattatgagaagaggtgaatctctagataacctggat
tccccaagatccaattcttggaaaccatccccttggctcaatcagtcttcaggagtccgt
gcttcttcctccgttcaagacttcagtcgccccccgcctcagctggtgtccacctcaaac
cgggcctacatgcgcaatccatcctccagcatcccccctccttcagcggggtctgtgaag
accaccactgcgccttcccccacaccacgcagccattctccttcagcatcgcagccgagc
tcccagctacgcaataggtcagtcagtgggaagcgcgtgtgctcctactgtaataacatt
ctgggcaaaggagctgccatgatcatcgagtccctgggtctttgttatcatttgcattgt
tttaagtgtgtggcctgttcgtgtgacctcggaggctcctcttcaggagctgaagtccga
atcagaaaccaccagctctactgcaacgactgctatctcagattcaaatctggacggcca
accgccatgtga
DBGET
integrated database retrieval system
