Lutra lutra (Eurasian river otter): 125094830 Help Entry 125094830         CDS       T08100                                  Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism llv  Lutra lutra (Eurasian river otter) Pathway llv04151   PI3K-Akt signaling pathway llv04510   Focal adhesion llv04512   ECM-receptor interaction llv04820   Cytoskeleton in muscle cells llv04926   Relaxin signaling pathway llv04933   AGE-RAGE signaling pathway in diabetic complications llv04974   Protein digestion and absorption llv05146   Amoebiasis llv05165   Human papillomavirus infection llv05200   Pathways in cancer llv05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:llv00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     125094830   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     125094830  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     125094830   09142 Cell motility    04820 Cytoskeleton in muscle cells     125094830  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     125094830   09154 Digestive system    04974 Protein digestion and absorption     125094830  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     125094830   09162 Cancer: specific types    05222 Small cell lung cancer     125094830   09172 Infectious disease: viral    05165 Human papillomavirus infection     125094830   09174 Infectious disease: parasitic    05146 Amoebiasis     125094830   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     125094830  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:llv04147]     125094830    00536 Glycosaminoglycan binding proteins [BR:llv00536]     125094830 Exosome [BR:llv04147]  Exosomal proteins   Exosomal proteins of other cancer cells    125094830 Glycosaminoglycan binding proteins [BR:llv00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    125094830 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  125094830 NCBI-ProteinID:  XP_047576351 LinkDB All DBs Position 3:complement(198611247..198743880) Genome browser AA seq 1669 aa AA seqDB search MVPRLGFWLLLLAAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP GIPGCNGTKGEPGPLGPPGLPGFAGNPGPPGLPGMKGDPGEIIGHVPGTLLKGERGFPGP PGAPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP GVPGQAQVKEKGDFATKGEKGQKGEPGFQGMPGLGEKGEPGKPGPRGKPGKDGEKGEKGS PGFPGDTGYPGLPGREGFKGDKGEAGPPGPPGIAIGPGPLGEKGERGYPGAPGLRGEPGP KGFPGLQGQPGPPGFPVPGQIGAPGFPGERGEKGAQGFPGTSLPGPSGRDGLPGPPGPPG PPGQPGHTNGIVECQPGPPGAQGPPGIPGQPGLTGEVGEKGQKGDSCLICDTAGLRGPPG PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGAPGLMGQPGAKGEPGEIYFDARLK GDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDT GPPGPPGFGLPGPVGDKGQAGFPGNPGSPGQPGPKGEAGKVVPLPGPPGAQGLPGSPGFP GPQGDRGFPGTPGRPGLPGEKGTVGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNG LPGSPGVPGQKGEPGVGLPGLKGLPGIPGIPGTPGEKGNVGGPGVPGEHGAVGPPGLQGI RGDPGPPGLQGPRGAPGVPGVGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPG PKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGPKGEMGVMGTPGQPGSPGPAGLPG LPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDEVHMGSMKGQKGDQGEKGQTG PTGEKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPG TPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDQGVTGFPGSPGE KGEKGSAGMPGVPGSPGPKGSPGTVGYPGSPGLPGEKGDKGLPGSDGIPGIKGEAGLPGK PGLTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGEKGSKGDVGFPGQAGSP GIPGSKGEQGFIGPPGPQGQPGLPGAPGHAVEGPKGDRGPQGQPGLPGLPGPMGPPGLPG LDGLKGDKGNPGWPGAPGTPGPKGEPGFQGLPGIGGSPGITGSKGDMGPPGVPGFQGQKG LPGLQGVKGDPGDQGFPGSKGLPGPPGPPGPYDIIKGEPGLPGPEGPAGLKGLPGPPGPK GQQGVTGSVGLPGPPGVPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP SVDHGFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM PFLFCNINDVCNFASRNDYSYWLSTPEPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMAV HSQTIQIPPCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atggtgccccggctcggcttctggcttctgctgctggccgccgccctcctgctccacgag gagcgcagccgggccgctgcgaagggtggttgtgctggctctggctgtgggaagtgtgac tgtcatggagtgaagggacagaagggcgaaaggggcctccccgggttgcaaggtgtcatc gggtttcccgggatgcaaggacccgaggggccgcaggggccaccaggacaaaagggtgac actggagaacccggcctgcccggaacgaaagggacaagaggacccccaggagcatcgggt taccccggaaacccaggactgccgggtattcctggccaagacggtccccccggtcctcca ggtatccccggatgcaatggaacaaagggtgagccagggcctctggggcccccaggtttg cctggattcgctggaaatcccggaccgccagggttaccaggaatgaagggggatcctggt gaaatcattgggcatgtgcctgggaccctgttgaaaggtgaaagaggatttcctggaccc ccaggagcgccaggctcgccgggactgccaggccttcagggtcctgttggccctccagga tttaccggaccaccaggtcctccaggccctcctggccctccaggtgaaaaggggcaaatg ggcttaagttttcaagggccaaaaggtgacaagggtgaccagggggtcagtgggcctccg ggagtgccaggacaagctcaagttaaagaaaaaggagactttgccaccaaaggagaaaag ggtcaaaaaggtgaacctggatttcagggaatgccagggcttggagagaaaggggagccc ggaaagccagggccccgaggaaaacctggaaaagatggcgaaaaaggagaaaaagggagt ccaggctttccaggcgacacggggtacccgggactcccaggccgtgaaggtttcaaggga gacaaaggtgaagcaggtcctccaggcccacctggaattgcaatcggcccaggacccttg ggagaaaaaggagagcggggatacccgggcgccccagggttgagaggagagccaggcccc aaaggtttcccgggattgcaaggccagccaggccctccaggctttccagtaccagggcag atcggggctcctggattcccgggggaaagaggcgagaaaggtgcacagggctttccgggc acatctttgccaggaccgagcggacgggatggactcccgggcccccctgggcctcccggg ccccctggacagccgggccacacaaatggaatcgtggaatgccagcctgggccgccaggg gcccagggcccccccggaattccagggcagccagggctgacgggcgaggttggagaaaaa ggtcagaaaggagacagctgcctcatctgtgacacagcgggacttcgtgggccccctggg ccgcagggccccccgggagaaataggtttcccaggacagccaggggccaagggcgacaga ggcttgcctggcagagatggtctggaaggattgcctggcccgcaaggcgcaccagggctg atgggccagccgggagccaagggagagcctggcgagatttacttcgacgcacggctcaaa ggagacaaaggagacccaggctttccaggacagcccgggatgccaggcagagcagggtct cctgggagagacggccatccgggtctgcccggccccaaaggctccccggggtcggtagga ttgaaaggagagcgtggcccccccgggggagttggattccccggcagtcgtggtgacacc ggccctccagggcctccagggttcggccttcctggccccgttggcgacaagggacaagcg ggttttccagggaaccctggctccccaggccagccaggtcccaagggcgaagcaggaaaa gttgtgcccctaccgggtccccccggagcacaaggacttccgggatccccaggcttcccc gggccgcaaggtgaccgaggttttcctggaaccccaggaaggccaggcctcccgggagag aagggcactgtcggccagcctggaatcggatttccagggccccctggccccaaaggtgtt gatggcttgcctggggacgtggggcctcctggcagtccaggccgcccggggttcaatggc ttacccggcagtccgggtgtgcccggccaaaagggggagccgggagttggtctaccagga ctcaaaggcttgccaggcattcccggcattcccggcacacccggggagaaggggaacgtc gggggaccgggcgtcccaggagagcacggtgctgtcggccccccaggccttcagggaatc agaggtgaccccgggccgcctggattacaaggtcccagaggagctccaggagtccctgga gttggcccgcccggcgcaatgggaccccctggaggacagggaccgccagggtcctcaggc cctcctggagtgaaaggagagaagggcttccctggatttccaggcctggacatgccaggt cccaaaggagataaagggtcccaagggctaccaggcctgacgggacagtcggggctccct ggtctccccggacagcagggcacccctggcgttcctgggtttccaggtcccaagggggag atgggcgtcatggggaccccggggcagcccggctccccaggaccagcgggcctgccagga ttaccaggagagaaaggggaccacggcttcccgggctcctcggggccccggggtgaccct ggcttcaagggggacaaaggagacgtgggtctccctggcaagccgggctccatggatgag gtgcacatgggcagcatgaagggccagaagggagaccaaggagagaaagggcaaactgga ccaaccggcgagaaggggtcccggggtgaccccggaaccccaggagtgcctggaaaggac ggccaggccgggcatcctgggcagccaggacctaaaggggacccaggcataggcggaacc ccgggcgctccaggtctccctggacccaaaggatcagttggtggaatgggcctgccagga acgcccggagaaaagggggtgcctggaatccccggcccgcagggcgtccctggcttaccc ggggagaagggagcaaaaggagagaaaggacaggcgggcctacctggcattggaattccg ggccgtcctggggacaagggagatcaaggggtcacaggctttccggggagtcctggagag aagggagagaaaggaagcgctggcatgccgggggtccccggctccccaggccccaaagga tcgccggggactgtcggctacccaggaagccctgggttgcccggagaaaaaggggacaaa ggtctcccaggatcggacggcattcccggcatcaagggagaagcaggtcttcctgggaag cccggcctcacgggccccgctggccagaaaggggagcccggcagtgacggaatcccaggg tcggcgggagagaagggtgaaccaggtctgcccggaagaggattcccagggtttccaggg gccaaaggagagaaaggttcaaagggcgacgtgggtttcccgggacaagccggcagccca ggcatccccgggtccaaaggcgagcaaggattcataggtccgccggggccacaaggacag ccgggcttacctggagctccaggccacgctgtggaaggacccaagggagaccggggccca cagggtcagcccggcctgccagggcttccgggacctatggggcctccggggctccctggg cttgacggactcaaaggtgacaaaggaaacccaggctggccgggggcccccggaacccca ggacccaagggagagccaggattccagggcctgcctgggattggtggctcgccagggatc acgggctcgaagggtgacatggggcctccaggagtgccaggatttcaaggtcagaaaggc ctccctggcctgcagggagtgaagggggatccaggtgaccaaggtttcccgggaagtaaa ggccttcccggtcccccagggccccccggaccctacgacatcatcaaaggggagccaggg cttcctggtcccgagggtcctgcaggtctgaaggggctcccagggcctccaggccccaaa ggacagcaaggcgtgacaggatccgtgggcttacccggaccgcccggtgttcctggtttt gacggcgcccctggccagaaaggagagacgggccccttcgggccccctggtccacgaggg ttcccgggcccaccaggccccgacggcttgccaggatccatgggccccccaggcaccccg tctgtggaccacggctttcttgtgaccaggcacagtcagacaacggatgacccacagtgt cctcctgggaccaaaattctttaccacgggtactccttgctctacgtgcaaggcaacgaa cgggcccacggccaggacctaggcacggccgggagctgcctgcgcaagttcagtacgatg cctttcctcttctgcaacatcaacgacgtgtgcaacttcgcctcccggaacgactactcc tactggctgtccacgcccgagcccatgcccatgtccatggcgcccatcgccggggacaac atcagaccgttcatcagcaggtgtgcggtgtgtgaggcgccagccatggtgatggccgtg cacagccagaccatccagatcccgccgtgccccagcggctggtcctccctctggattggc tactccttcgtcatgcacaccagtgccggcgctgaaggttccggccaggccctggcgtcc ccgggctcttgtctggaggagttcaggagtgcgccgttcatcgagtgccacggccgcggg acgtgcaactactacgccaacgcttacagcttctggcttgccacgatcgagagaagtgag atgttcaagaagcccacgccatccaccttgaaggccggggagctgcgcacacacgtcagc cgttgccaggtctgcatgaggagaacgtaa

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