Lutra lutra (Eurasian river otter): 125094879
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Entry
125094879 CDS
T08100
Name
(RefSeq) regulator of nonsense transcripts 3A-like isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03013
Nucleocytoplasmic transport
llv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125094879
03015 mRNA surveillance pathway
125094879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125094879
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125094879
mRNA cycle factors
P-body specific factors
125094879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
125094879
NCBI-ProteinID:
XP_047576476
LinkDB
All DBs
Position
3:201257315..201297790
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AA seq
524 aa
AA seq
DB search
MRSEKEGVGGSGAAVAAQGPSGREKVSAVEVQFRRESPRREPEVPPASSFACGGGTSKPR
EEKKTVLSKVVIRRLPPGLTKEQLEEQLHPLPAHDYFEFFTADLSLYPHLYSRAYINFRN
PDDILLFRDRFDGYIFIDSKGLEYPAVVEFAPFQKIAKKKIKKKDVKTGSIEDDPEYKKF
LETYCVEEEKPNANPETLLGDIEAKTRELIARRTTPLLEYIRNRKLEKQRIREEKREERR
RRELEKKRLREEEKRKKREEERCKRKEADRQKRAAEREVRIKLLKKPEKGEEPTEKPKER
AEEVDIGDGKREPSAGCAVLKPTPFGSLVEEPREKSQNDSDKEQREVERRFREKEPETQR
CHVDDSRKHRAPCELDKFSRRNEEEPKWGKGVPPDTGKKGKQDSGVPVEAAEWPGREHRN
EGGPAPKVERPGNKDRPALQLYQPGARIRARETGGGVSVEGHDGSRGEAEDSAWAGSQKS
EEAGFYLFERESTRGEKVLPRCGAGNGMPDSIPRLWDHDLNRRQ
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcagagaaggagggggtgggaggctccggggcggccgttgccgcgcagggcccg
agcgggagggaaaaggtgtctgctgtggaagtccaattccgccgagagtcgccgcggcga
gaaccagaggtgccaccagcctcgtccttcgcctgtgggggcggtacaagcaaacctcgc
gaggagaagaagaccgtcctgagcaaggtggtgatccggcggctgcctcccggcctcacc
aaggagcagctggaggagcagctgcacccgctgcccgcgcacgactacttcgagttcttc
acggccgacttgagtctttatcctcatctttactcaagagcatacattaattttagaaat
cctgatgacatccttctttttagagatcgtttcgatggctatatcttcatcgacagtaaa
ggcctagaatatcctgcggtggtagagtttgccccattccagaagatagccaaaaagaaa
ataaagaaaaaagatgtcaaaactggaagcattgaagacgatccagaatataagaagttt
ttggaaacttactgtgtggaggaagagaaacctaatgccaatcctgaaactctcctggga
gacatagaggcaaagactagagaacttattgctagaagaaccacacctcttttggaatat
attagaaatagaaaattagagaagcagaggattcgagaagagaagcgagaagaacgaaga
agaagggagctggagaagaagcgtttacgggaagaagaaaagagaaaaaagagagaagag
gagaggtgtaagaggaaagaggcagacagacagaagagagctgctgagagagaagtaagg
attaagcttcttaagaaaccagaaaagggggaggaaccaactgaaaagccaaaagaaaga
gcagaggaagtggacattggagatggaaaacgggagcccagtgctggctgtgctgtcctg
aagcccacgccctttgggagcttggtggaggagcccagggaaaagtcacagaatgacagt
gataaagagcaaagggaggtggagagaaggtttcgagaaaaagagcctgaaacacaaaga
tgccacgtggacgacagtagaaagcacagagctccctgtgagttagacaagttttcaagg
agaaacgaagaagagccaaaatgggggaaaggagtccccccagacacagggaagaagggg
aaacaggacagtggcgtccctgtggaggcagcagagtggcccgggagagagcacaggaat
gaaggcggcccagcacccaaagtggagcgtccgggaaacaaggaccggccagccttgcag
ctgtaccagccaggagctcgcatccgagcacgagaaactggtgggggagtctccgtggag
ggccatgatgggagcaggggcgaggctgaagattcggcgtgggctggttctcagaagagt
gaagaggcaggattttatttatttgagagagagagcacgagaggggagaaggtccttccc
cgctgcggagctgggaacgggatgccagactcgatcccccgactctgggatcacgacctg
aaccgaaggcagtaa
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