KEGG   Lutra lutra (Eurasian river otter): 125094969
Entry
125094969         CDS       T08100                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125094969
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:llv03041]
    125094969
   03036 Chromosome and associated proteins [BR:llv03036]
    125094969
Spliceosome [BR:llv03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    125094969
 Complex B
    125094969
 Complex C
   U2 SnRNP specific factors
    125094969
Chromosome and associated proteins [BR:llv03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    125094969
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG DUF2298 TALPID3
Other DBs
NCBI-GeneID: 125094969
NCBI-ProteinID: XP_047576615
LinkDB
Position
3:complement(9639602..9699954)
AA seq 1394 aa
MTLNFSAKEVTVKDCLHKLSTATAEADAKEDFSVAPVHFPVAALSRVTRRSARPLGACAE
SIPQLFFSVAAAASGSPWERQFRLCVRVDKMAKIAKTHEDIEAQIREIQGKKAALDEAQG
VGLDSTGYYDQEIYGGSDSRFAGYVTSIAATELEDDDDDYSSSTSLLGQKKPGYHAPVAL
LNDIPQSTEQYDPFAEHRPPKIADREDEYKKHRRTMIISPERLDPFADGGKTPDPKMNAR
TYMDVMREQHLTKEEREIRQQLAEKAKAGELKVVNGAAASQPPSKRKRRWDQTADQTPGA
TPKKLSSWDQAETPGHTPSLRWDETPGRAKGSETPGATPGSKIWDPTPSHTPAGAATPGR
GDTPGHATPGHGGATSSARKNRWDETPKTERDTPGHGSGWAETPRTDRGGDSIGETPTPG
ASKRKSRWDETPASQMGGSTPVLTPGKTPIGTPAMNMATPTPGHIMSMTPEQLQAWRWER
EIDERNRPLSDEELDAMFPEGYKVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHMQTED
RTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPP
MRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPY
VHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTAR
AFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEII
EHGLVDEQQKVRTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAI
GYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEI
LPPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVME
TIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLP
QICGTVLWRLNNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVL
GSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYV
SAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRV
CTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVT
PLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAV
MGALEGLRVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPRIYND
DKNTYIRYELDYIL
NT seq 4185 nt   +upstreamnt  +downstreamnt
atgaccttgaatttcagcgcgaaggaggtgactgttaaggactgtttgcacaaactctcc
accgcaacagctgaggcagatgctaaggaagacttttctgtggcgccagtgcacttcccg
gtggcggctctgtcacgtgtcacccgacggagcgcgcgcccgcttggcgcatgcgcagag
agcattccccagctatttttctccgtggcagcggcggcgagcggaagtccttgggagcgc
cagttccgtctgtgtgttcgagtggacaaaatggcgaagattgccaagactcacgaagat
attgaagcacagattcgagaaattcaaggcaagaaggcggctcttgatgaagctcaagga
gtgggccttgattctacaggttattatgaccaggaaatttatggtggaagtgacagccga
tttgctggatatgtgacatcaattgctgcaactgaacttgaagatgatgacgatgactac
tcatcatctacaagtttgcttggtcagaagaagccgggatatcatgcccctgtggcattg
cttaatgatataccacaatcaacagaacagtatgatccattcgccgagcaccgacctcca
aagattgctgaccgggaggatgaatacaaaaagcacaggaggaccatgataatatcccca
gagcgtcttgatccttttgcagatggagggaagacccctgatcctaaaatgaacgctagg
acttacatggatgtaatgcgagaacagcatttaactaaagaagagagagaaattaggcag
cagctagcagaaaaagctaaagctggagaactaaaagttgtcaatggagcagcagcatcc
caacctccctcaaaacgaaaacggcgttgggatcaaacagccgatcagactcctggtgcc
actcccaaaaagttgtcaagttgggatcaagcagagacccctggacataccccttcctta
agatgggatgagacaccaggtcgtgcaaagggaagtgagactcctggagcaacccctggc
tcaaaaatatgggaccctacccctagtcacacaccagcgggagctgctactccgggacgt
ggggacacacctggccatgcgacaccaggccatggaggcgcaacttccagtgctcgtaaa
aacagatgggatgagacccccaaaacagaaagagatactcctggacatggtagcggatgg
gctgagacgcctcgaacagatcgaggtggagattcaattggtgaaacaccaactcctgga
gccagtaaaagaaagtcacgttgggatgaaacaccagccagtcagatgggtggaagtact
cctgttctgacccctggaaagacaccaattggcacaccagccatgaacatggctacccct
actccaggtcacataatgagtatgactcctgaacagcttcaggcttggcggtgggaaaga
gaaattgatgagagaaatcgcccactttctgatgaagaattagatgctatgtttccagaa
ggatacaaggtacttccccctccagctggttatgttcctattcgaactccagctcgaaag
ctgacagcaactccaacacctttgggtggcatgactggtttccacatgcaaactgaagat
aggacaatgaaaagtgttaatgaccaaccatctggaaatcttccatttttaaaacccgat
gatattcagtactttgataaacttttggttgatgttgatgaatcaacacttagtccagaa
gagcaaaaagagagaaaaataatgaaactgcttttaaaaattaagaatggaacacctcca
atgagaaaggctgcattgcgtcagattactgataaagctcgtgaatttggagctggtcct
ttgtttaatcagattcttcctctcctgatgtctcctacacttgaggatcaagagcgtcat
ttacttgtgaaagttattgatcgaatattatacaaacttgatgacttagttcgaccatat
gtgcacaagatccttgtggtcattgaaccattgttgattgatgaagattactatgccaga
gtggaaggtcgagagattatttctaatttggcaaaggctgctggtctggctactatgatc
tctaccatgagacctgatattgataacatggatgagtatgtccgtaacacaacagctaga
gcttttgctgttgtagcctctgccctgggcattccttcattgttgcccttcttaaaagct
gtgtgtaaaagcaagaagtcctggcaagcgagacacactggtattaagattgtacagcag
attgctattcttatgggctgtgccatcttgccacatctcagaagtctagtcgaaatcatc
gagcatggtcttgtggatgagcaacagaaagttcggacaattagtgctttggccattgct
gccctggctgaagccgcaactccgtatggtattgagtcttttgattctgtgttaaagcct
ctgtggaagggtatccgccaacacagaggaaagggtctggctgctttcttaaaagctatt
gggtatcttattcctcttatggatgcagaatatgccaactactataccagagaagtgatg
ttaatcctcattcgagaatttcagtctcctgatgaagaaatgaagaaaattgtgctgaag
gtggtaaagcagtgttgtggaacagatggtgtagaagcaaactacattaaaacagagatt
cttccgcctttttttaaacacttctggcaacacagaatggctttggatagaagaaattac
cgtcagttagttgatactaccgtggagttggcaaacaaagtaggtgcggcagaaattata
tctaggattgtggatgatctgaaagatgaagctgaacagtacagaaaaatggtgatggag
acaattgagaagattatgggcaacttgggagccgcagatattgatcataaacttgaagaa
cagttgattgacggcattctttatgctttccaggagcagactacagaggactcagtaatg
ttgaatggctttggcacagtggtcaatgctctcggcaaacgagtcaaaccttacttgcct
cagatctgtggtacagttttgtggcgtttaaataacaaatcagcaaaagttaggcaacag
gcagctgacctgatctctcgaactgctgttgtcatgaagacttgtcaagaggaaaaattg
atggggcacttgggcgttgttttgtatgaatatttgggtgaagagtaccctgaagtattg
ggcagcattcttggagcactgaaggccattgtaaatgtaataggtatgcataagatgacc
ccaccaattaaagatctcctgcctagactcacccccatcttaaagaacaggcatgaaaaa
gtacaagagaattgtatcgatcttgtcggacgcattgctgacaggggagctgaatatgtg
tctgcgagagaatggatgaggatttgctttgagcttttggagctcttaaaagctcacaaa
aaagctattcgtagagccacagtcaacacatttggctacattgcaaaggccattggccct
catgatgtcttggctacacttttaaataacctcaaagttcaggaaaggcagaacagagtt
tgtaccactgtagcaatagctatcgtcgcagaaacatgttcacccttcacagtactacct
gccttaatgaatgaatacagagttcctgagctgaatgttcaaaatggagtgttaaaatca
ctttccttcttatttgaatatattggtgaaatgggaaaggactacatttatgctgtaaca
ccattgcttgaagatgctttaatggatagggaccttgtacacaggcagacggctagcgcg
gtggtgcaacacatgtcactcggggtgtatggatttggttgtgaagattcactgaatcac
ttgttgaactatgtatggcccaatgtgtttgagacctctccacatgtgattcaggcggtt
atgggagccctggagggcctgagagttgctatcggaccatgtagaatgttgcagtattgt
ttacagggtctgtttcacccggcccggaaagtcagagacgtgtactggaagatttacaac
tccatctacattggttctcaggacgcgctcatagcacattacccaagaatctacaatgat
gataagaacacctatattcgttacgaacttgactatatcttataa

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