Lutra lutra (Eurasian river otter): 125095110
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Entry
125095110 CDS
T08100
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llv03021
]
125095110
03041 Spliceosome [BR:
llv03041
]
125095110
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125095110
Spliceosome [BR:
llv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
125095110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125095110
NCBI-ProteinID:
XP_047577055
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All DBs
Position
1:13117654..13188353
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AA seq
1138 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPQATTNSVPAVAQMP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPAIDNAVMAQVQAITAQLKTAPAQP
PEQKAVFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDGTTAAAAAPAMAVAPPAPSA
ATPAPAPAASPPQAPFGFPGDGMQQPAYTQHQTMDQFQPRMMTIQQDPVHHQVPLPPNGQ
MPGFGLLPTPPFPPMAQSVIPPTPPVQQPFQASFQAQNEPLTQKAHQEMEVEQPCIQEVK
RHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDRE
KERERRQKGLPQIKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGC
AYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWD
KVKPEELESFCEGGMLDSDTLNPDWKGIPKKHENEVAQNGGAETSHTEPVSPIPKPLPVP
VPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPTFTPPLGIPPPGFGPGVPPPPPPPPFL
RPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPI
PTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAP
STGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFGMPPPHGM
KGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQQPQPQQPPPPQPQPQQPPPAQQQ
QQQPPPAQQQPQPFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGSRNDDRDNSNRE
RREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRRDKEENRGKEKPEVTDRAGG
NKTVEPPISQVGTVDTVSELGKGESESAVVKPSEELPAEATSSVEPEKDSGSAAEAPR
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttttcacttatggatatgaaacctccc
atctctcgagccaagatgattcttatcactaaagctgctattaaagctattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccagagtacaaggtt
ccaggattatatgtaattgactcaattgtgcgacagtctcgtcatcagtttggaactgat
aaagatgtttttgggccaagattctctaaaaacataaccgccacattccaatatttatat
ctttgtccatctgaagataagagtaaaatagttcgtgtgctgaacctttggcaaaaaaat
ggagtattcaaaattgaaattattcagcctcttttggacatggctgcaggaaccagtaat
gccgccccagtagcagaaaatgttactaataatgaaggttcacctccacctccagttaaa
gtttcttctgaaccgccccaagccactacaaactctgtaccagctgtagcacagatgcct
agctctgacgcttttgctgctgtggcccaactgtttcagacaactcaaggtcaacagctt
cagcagatccttcagacttttcaacagcctccaaaaccgcagtcgccagccattgacaat
gccgtgatggctcaggtccaggctatcacagctcagttaaagacagctcctgcacagcca
cctgaacaaaaagctgttttccccccacctgagcaaaaaactgcatttgacaagaagcta
ctcgatagatttgattatgatgatgagccagaggctgtggaagagtcaaagaaggaagat
ggcaccactgctgccgccgctgcacctgccatggctgttgcgcctcccgcgccctccgcg
gccacgccggcccccgcacctgccgcttcccctccacaggcaccctttgggtttcctgga
gatggcatgcagcagccggcatacacacagcatcaaactatggatcagtttcagcctcga
atgatgacgatacagcaggacccagtgcatcatcaggttccacttcctcctaatggacag
atgccaggatttggccttcttcctacacctccatttcctcccatggctcagtctgtgatt
cctccaactccacctgtgcagcagcctttccaagcttcttttcaggcacagaatgaacca
ctaacacagaaggcacatcaggaaatggaagtcgaacagccttgtattcaagaggttaag
cggcacatgtctgataacagaaagtcaagatctaggtcagcatccaggtcaccaaaaaga
aggcgatctcgatctggctctagatctcgaaggtcccgccatcgacgttctcgatcccgg
tccagagatagacgccgacattctcccagatctcggtcccaagaaaggcgagacagagaa
aaagaaagagaacgccgacaaaaaggccttcctcaaatcaaaccagaaactgcaagtgtt
tgtagtactacactctgggtgggacagctggacaaaaggactactcaacaagatgttgcc
agtctcttagaagagttcggtccaattgaatcaattaacatgattcctcccagaggttgt
gcctatattgttatggttcataggcaagatgcctatcgtgccctgcagaaactgagccga
ggaaactataaagtaaaccagaaatccataaagattgcctgggctttaaacaaaggaata
aaggcagattataagcagtattgggatgtagaactgggtgttacttatattccgtgggac
aaagtcaaacctgaagaactggagagtttttgtgaaggaggaatgttggacagtgataca
cttaatccagattggaaaggaattcccaagaagcatgaaaatgaagttgcccaaaatgga
ggggcagaaacctcacatacagaaccagtatcacccatacctaaacctttaccagtgcct
gtccctcctattcctgtccccgcacctataacagtgccacctccacaggtcccgccacat
cagccgggtcctcctgtagttggtgctctccagccacccactttcacgcctcccttgggc
attccccctccgggttttggtcctggtgttcctcctccaccacctcctccaccatttttg
cgcccaggatttaatccgatgcatttaccaccaggttttcttcctcctggacccccacct
cctataactccaccagtatccattcctcctcctcacactcctccaataagcatcccaaac
tctactatcgctggtataaatgaagacactacaaaagacttatctattggaaatcccatt
ccaacagtggtgtctggggctagaggaaacgccgagtctggtgacagtgtgaaaatgtat
ggctctgccgtgccacctgctgcacccacgaatctgcccacccctcctgtaacccagcct
gtttcacttcttggtactcaaggagttgcacctggtcctgtaattgggctccaggcacca
tccactggtcttctcggtgcccgacctggcctgatcccacttcagcgccctccaggaatg
cctccacctcacttacagaggttccctttgatgccacctcgtcccatgccgccacatatg
atgcacagaggtccccctccaggaccggggggctttggaatgccgccacctcatggaatg
aaaggcccctttccaccacatggcccctttgttcggcctggcggaatgccagggctcggg
ggcccagggccaggcccagggggtcctgaagacagagacggaaggcagcagcaaccccag
ccgcagcagcccccaccgccgcaaccgcagccccagcagcctccacccgcgcagcagcag
cagcagcagccgccgccagcacagcaacaaccacagccgtttagaaatgataacaggcag
cagttcaattcaggtagagaccaagagaggtttggaagaagatcttttggaaatagggtg
gaaaatgaccgggaacggtatgggagccgtaatgatgatagagataatagtaaccgtgaa
aggagagagtggggaagaaggagccctgaccgggacaggcacagagacttggaagagaga
aatagacgctctagtgggcatcgagacagagagagagattctagagatagagagtctcgt
agagataaggaagaaaaccgaggaaaggagaagcccgaggtgacagacagggcaggtggt
aacaaaaccgttgaacctcccattagccaagtgggaaccgtagacactgtttcagaactt
ggtaagggggagtctgagtctgccgttgtaaaaccttctgaagagctacctgctgaggct
acctcatccgttgaacccgaaaaggattctggctcagcagcagaggctcctcgttag
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