Lutra lutra (Eurasian river otter): 125095122
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Entry
125095122 CDS
T08100
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv05014
Amyotrophic lateral sclerosis
llv05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125095122
05022 Pathways of neurodegeneration - multiple diseases
125095122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125095122
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
125095122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
MORN
RCC1_2
VPS9
RhoGEF
PH
CCDC47
Motif
Other DBs
NCBI-GeneID:
125095122
NCBI-ProteinID:
XP_047577073
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All DBs
Position
3:complement(13701649..13777908)
Genome browser
AA seq
1657 aa
AA seq
DB search
MDSKKRSSTEAEGSKERGLVHVWQAGSYSVTPERLPGWGGKTVLQAALGVKHGVLLTEDG
EVYSFGTLPWRSEPAEICPNSPILENALVGQYVVTVASGSFHSGAVTESGIVYMWGENSA
GQCAVANQQYVPEPNPVSISDSETSSLVAVRILQLACGEEHTLALSISREIWAWGTGCQL
GLITTSFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPSQDLKPVPERCNQCSQLLI
TMTDKEDHVIISDSHCCPLGVTLSESQAENQASTAISPCTETLDSQGEVFENTLVGKDLP
VATDTNVGDVQTTGGDAISSQQDVVGTTEISSARNVLSCPDTQAVNEYMAKLSDHSVREN
SENSEKPVPSQPLVEEAVPNLHSPPTTSTSALNSLVVSCASAVGVRVAATYEAGALSLKK
VMNFYSTAPCEPGTQAGSSSIGPEGLKDSREEQVKQESMQGKKSSSLVDIREEESEGGSR
RLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLG
HGDVLPRLQPLCVKCLDGKEVICLEAGGYHSLALTAKSQVYSWGSNTFGQLGHYDFPTTV
PRLAKVNSENRVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQDPAEGDNLPENHSGTKTPV
LLSCSKLGYISRVTAGKDSYLALVDKNVMGYIASLHELATTERRFYSKLSDIKSQILRPL
LSLENLGTASTVQLLQEVASRFSKLCYLIGQHGASLSNFLHGIKEARSLVILKHASLFLD
SYTEYCTSITNFLVMGGFQLLAKPAIDFLNKNQELLEDLSEVNDENTQLMEILNTLFFLP
IRRLHNYAKVLLKLATCFEVTSPDYQKLQDSSSCYESLALHLGRKRKEAEYTLGFWKTFP
GKMTDSLRKPERRLLCESSNRALSLQHAGRFSVNWFILFNDALVHAQFSTHHVFPLATLW
AEPLSEEAGGVNGLKITTPEEQFTLISSTPQEKTKWLRAISQAVDQALRGTSDLPPYGSG
SGIQRQEPPISRSAKYTFYKDPRLKDATYDGRWLSGKPHGRGVLKWPDGKMYSGMFRNGL
EDGYGEYRIPNKALNKEDHYVGHWKEGKMCGQGVYSYASGEVFEGCFQDNMRHGHGLLRS
GKLTSSSPSMFIGQWVMDKKAGYGVFDDITRGEKYMGMWQDDVCQGNGVVVTQFGLYYEG
NFHLNKMMGNGVLLSEDDTIYEGEFSDDWTLSGKGTLTMPNGDYIEGYFSGEWGSGIKIT
GTYFKPSLYESDKDRPKVFRKLGNLAVSADEKWKAVFDECWHQLGCENPGQGEVWKAWDN
IAVALTTSRRQHRDSPETLSRSQTQTLESLEFIPQHVGAFSVEKYDDIKKYLIKACDTPL
HPLGRLVETLVAVYRMTYVGVGANRRLLQEAVKEIKSYLKRIFQLVRFLFPELPEEGSTI
PLSVPLPTERKSFCTGKSDSRSESPEPGYVVTSSGLLLPVLLPRLYPPLFMLYALDNDRE
EDIYWECVLRLNKQPDIALLGFLGVQRKFWPATLSILGESKKVLPTTKDACFASAVECLQ
QISTTFTPSDKLKVIQQTFEEISQSVLASLQEDFLWSMDDLFPVFLYVVLRARIRNLGSE
VHLIEDLMDPYLQHGEQGIMFTTLKACYYQIQREKLN
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggactcaaagaagagaagctcaacagaagcggaaggatccaaagaaagaggcctggtc
cacgtgtggcaggcaggatcctattctgtaacaccagagagactgccaggctggggagga
aagactgttcttcaagcagcccttggagtgaagcatggagttcttctgactgaagatggt
gaggtctacagctttgggacgcttccctggagaagtgaaccagcagagatttgtccgaat
agccccattctagaaaatgccctggttgggcaatatgttgttaccgtggcatcagggagt
ttccacagtggagcagtgacagaaagtggcatagtgtacatgtggggggagaactctgca
ggccagtgcgcagtagctaaccagcagtatgttccagaaccgaatcctgtcagcatttct
gactctgagaccagttctttggtagcggtcaggattttgcagttggcgtgtggtgaggag
cacacactggccttgtcgataagcagagagatttgggcatggggtactggttgtcagttg
ggtctcattaccacctccttcccggtgacaaagccacaaaaggtggaacatcttgctggc
cgagtcgtgctacaagttgcctgtggtgcgttccacagcttggcccttgtgcagtgcctc
ccttcccaggatctgaagccagtcccagaaagatgcaaccagtgcagccaactcctgatt
actatgactgacaaagaagaccatgtgattatatcagacagtcactgctgcccgttaggg
gtgacactgtcagaatcccaggcagaaaaccaggccagcactgccatcagcccctgcact
gaaacccttgacagtcagggagaagtgtttgagaacacgcttgtaggaaaggatctgcct
gttgctactgacacgaatgttggagatgttcagaccacgggtggtgatgccatttcctcc
caacaagacgtcgtgggaacaactgaaatttcttcggccagaaatgtactgtcgtgccct
gatactcaggcagtgaatgagtacatggcaaaactctcagatcattcagtaagagagaac
tcagagaacagcgaaaagccagtgccatctcagcctcttgtagaagaagcagttcctaat
cttcacagcccaccaaccacaagcacctcagccctaaacagcctagtagtctcttgtgca
tctgctgttggtgtgagagtggctgctacatatgaagctggggccttgtctcttaagaaa
gttatgaacttttatagtacggccccttgtgaacctggaactcaggcaggcagtagttcc
ataggcccagaaggtctgaaagatagcagagaagaacaggttaaacaggaatccatgcaa
ggaaagaagagttcaagtcttgtggatatccgagaagaggaatcagagggaggcagccgg
agactctccctccctggcttgttgtctcaagtttcccccaggctcttaagaaaagctgcc
cgggtaaaaacacggacagtggttctgactcctacatacagtggagaagcagatgcactt
ctgccttctctgagaacagaggtgtggacctgggggaaagggaaggaaggacagctggga
catggtgatgttctgcctaggcttcaaccactgtgtgtaaaatgtctggatggtaaagaa
gtaatctgtctggaggcaggtggttaccattctcttgcacttactgcgaaatcccaggtt
tactcctggggaagcaatacctttggtcaacttgggcattatgattttccaacaacagtt
cctcgtcttgcaaaggtgaacagtgaaaatagagtttggagcgtagccgcaggccaggat
tattccctgtttttagtggatacagaagacttccagcctgggttatattacagtggccga
caggaccctgcagaaggtgacaaccttccagagaatcacagtggtactaagactccagta
cttctctcctgtagtaagcttggatatataagcagagtgacagcaggaaaagatagctat
ctagctttggtggacaaaaatgttatgggatatattgccagtctccatgagttggctact
acggaaagacgattctattcaaaactaagtgacatcaaatctcagattctccggcctctt
ctcagtttagaaaatttgggcaccgcaagcacagtccagctgttgcaggaggtggcaagc
cgtttcagcaagctgtgttacctgattggtcagcacggagcctcactgagcaacttcctc
catgggataaaggaagcccggagtttggtcatcctgaagcatgcaagtctcttcttggat
agttatacagagtattgcacatctattacaaatttcctggttatgggaggattccagctt
cttgctaagcccgccattgatttcctaaataaaaaccaagagctgttagaagatttatca
gaagtaaatgatgagaacacccaattgatggaaatactgaatactctgtttttcttgcca
atcagacgacttcataattatgcaaaagttttgctaaagcttgctacttgttttgaagtg
acatctccggactaccagaaactgcaggattccagttcttgttacgagtctcttgctctc
catctcggcaggaaaaggaaggaagctgagtacacactgggattctggaagacctttccc
gggaagatgacggattccttgaggaagccagagcgtcggctgctctgcgagagcagtaac
cgagccctgtctctgcagcatgctggaaggttttctgtgaactggttcatcctctttaac
gatgccctagtccatgcccagttttccacacatcatgttttccctttggctacgctatgg
gcagagccactttctgaagaagctggtggtgtgaatggcttaaagataactacacccgag
gagcagttcactctcatttcatcaacaccccaggaaaagactaagtggctacgggctata
agccaagctgtggatcaggctttgaggggaacatctgatcttcccccttacggaagtggc
agcggtattcagaggcaggaaccacccatctcacgcagtgccaaatacactttctacaag
gatcctcgcctgaaggatgcgacctatgatggacgctggctttcagggaagcctcatggc
agaggggttttgaagtggccagatgggaagatgtattctggcatgttcaggaatggcttg
gaagatggatacggagaatacagaatcccaaacaaagcattgaacaaagaagaccattat
gtgggccattggaaagaaggaaaaatgtgtggtcaaggagtctatagttatgcctctggt
gaagtgtttgaaggctgttttcaagataacatgcgtcatggtcatggtctcctgagaagt
ggaaaattgacttcctcttctcccagcatgttcattggccagtgggtaatggataagaaa
gcaggatatggtgtctttgatgatatcactaggggggaaaagtatatgggaatgtggcaa
gacgacgtatgtcaagggaatggtgtggtagttacccagtttggattatactatgaaggc
aactttcaccttaataaaatgatgggaaatggggttttactttccgaagatgatactata
tatgagggagaattttcagatgactggactcttagtggaaagggaacactgactatgcca
aatggagattatattgaaggttattttagtggagaatggggatctgggataaaaatcact
ggaacctacttcaagcctagtctctatgagagtgataaagacagacccaaagttttcaga
aagctgggaaacctggcagtgtcagctgatgaaaagtggaaagcggtatttgatgaatgt
tggcatcaactgggctgtgagaacccaggccaaggggaagtctggaaagcctgggacaat
attgctgtggccctgaccaccagtcgacgccaacacagagacagtccagagacattaagt
cgttcgcagactcagacactggagagtttggaattcattcctcagcatgttggggccttc
tctgtggagaaatatgatgacatcaagaaatatttaataaaggcctgtgacactcctttg
caccccctgggcaggcttgtggagaccctggttgcagtttacagaatgacatacgtgggt
gtgggagccaatcgtaggttattgcaggaggctgtgaaggagatcaagtcttaccttaag
cgaattttccagctggtgagattcttgtttcctgagcttcccgaagagggcagcacaatt
cctctctctgtccctctgccaacggaaaggaaatccttttgcactggcaagtcagactcc
agatccgagtcgccagagccaggttatgtggtaacaagttctgggctattgcttcctgta
ctgctgcctcggctctacccaccactgttcatgctctatgccctggataacgatcgcgag
gaggacatttactgggaatgtgttctgcggctgaataagcagccagatattgctcttctg
ggcttccttggggtacagaggaaattctggcctgcaaccttgtcaatccttggagaaagt
aaaaaggttttgccaactacaaaagatgcttgttttgcctcagctgtagaatgtctacag
cagatcagcacaacatttaccccatcagacaaacttaaggtcatccagcaaacttttgaa
gagatctctcagagtgtgctggcatcacttcaggaagacttcttgtggtccatggatgac
ttgtttcctgttttcttatatgtggtgctacgggccaggattaggaatttaggctccgaa
gtacacctcattgaggatctaatggacccatatcttcagcatggggaacagggaataatg
ttcaccaccctgaaggcatgttactaccagatccagcgtgagaagcttaactag
DBGET
integrated database retrieval system