Lutra lutra (Eurasian river otter): 125095162
Help
Entry
125095162 CDS
T08100
Name
(RefSeq) X-ray repair cross-complementing protein 5-like
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
125095162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llv03400
]
125095162
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
125095162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
Glyco_hydro_18
Motif
Other DBs
NCBI-GeneID:
125095162
NCBI-ProteinID:
XP_047577159
LinkDB
All DBs
Position
3:26707246..26796320
Genome browser
AA seq
733 aa
AA seq
DB search
MARPGNKAAVVLCMDVGSAMSNSLPGEESPFELARKVMTMFVQRQVFAESRDEIALVLFG
TDGTENALAGKDQYQNITLHRHLMLPDFDLLEDIERKIQPGSQQADFLDALIVCMDVIQR
ETVGKKFEKRHIEVFTDLSSPFSKDQLDVIIHNLKKFGISLQFFLPFPVGKEDGTGDRED
GNSRSDHRGPSFPLKGITEQQKEGIRMVKKVMMSLEGEDGLDEIYSFSESLRQLCVFKKI
EKRSIPWHCTLTIGSSLSIKIVAYKSIIQERVKKSWTIVDARTLKKEDLQKETVYCLNDD
NETEVPKEDTIQGFRYGSDIIPFSKVDEEHMKYKSEGRCFSVLGFCRSSQVHRRYFMGNQ
ALKVFAENGDEAAAVALSSLIHALDELDMVAIVRYAYDRRANPQVGMAFPYIKDTYECLI
YVQLPFMEDLRQYMFSSLKNNKKYIPTEAQLSAVDALIDSMSLVKKGDKEDTIEDLFPTS
KIPNPQFQRLFQCLLHRALHPREPLPPIQQHILNMLDPPTEVTAQCQIPLSKIKTVFPLT
EAIKKKDQVTAQDIFQDNHEEGPTSKKLKTEEGAAGFSVSSLAEGSVTSVGSVNPAENFR
VLVRQKKASFEEASRQLINRIEQFLETNETPYFMKSLDCITVFREEAIQFSEEQRFNDFL
RALREKVEMKQLNHFWEIVVQDGITLITKDEAPGSSVTAEEAKKFLEPKENPNEDTAAVL
AEGGDVDDLLDLI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcccgggaataaggcagctgttgtactatgtatggatgtgggctccgccatg
agtaactcccttcctggcgaagagtccccatttgaactagcaaggaaggtgatgaccatg
tttgtgcagcgacaggtgtttgctgagagcagggatgaaattgctttagtcctttttggt
acagatggcactgagaatgcccttgctggtaaggatcaatatcagaacatcacactgcac
agacacctgatgctaccagattttgacttgctggaggacattgaaagaaaaatccaacca
ggttcccaacaagctgacttcctggatgcactcattgtgtgcatggatgtgattcaacga
gaaactgtaggaaagaagtttgagaagaggcatattgaagtgttcactgacctcagcagc
ccattcagcaaagatcagctggatgttataatccataacttgaagaaatttggcatctcc
ctgcagttctttttgcctttccccgttggcaaggaggatggaactggggacagggaagat
gggaactcacgctcagaccaccgtggaccctcctttcctctaaaaggaattactgagcag
caaaaagaaggtattcggatggtgaaaaaggtgatgatgtctttagaaggtgaagatggg
ctagatgaaatttattccttcagtgagagtctgagacaactgtgtgtctttaagaaaatt
gagaagcgttcgattccttggcactgcacactgaccattggctccagtttgtctataaag
atcgtggcttataaatcgattatacaggagagagttaaaaagtcttggaccattgtggac
gccagaaccctcaagaaagaagatctacagaaagaaactgtttattgcttaaatgatgac
aatgaaacagaggtcccgaaggaagacactattcaagggttccgctatggaagtgatatc
attcctttctctaaagtggatgaggaacacatgaagtataaatcggaagggaggtgcttc
tctgttttgggattttgtagatcttctcaggtccacaggagatattttatgggaaatcaa
gccctaaaggtctttgcagaaaacggtgatgaggcagcagcagtggcactttcctccctg
attcatgctttggatgaattggacatggtggccatagttcgatatgcctatgacagaaga
gctaatcctcaagttggcatggcgtttccttatatcaaggacacctatgagtgtttaata
tatgtgcagctgccttttatggaagacttgagacaatacatgttttcatctttgaaaaat
aataagaaatacattcctacagaggctcagttgagtgcagtagatgccctgattgactcc
atgagcttggtaaagaaaggtgacaaggaggacaccattgaagacttgtttccaaccagc
aaaatcccaaatcctcaatttcagagattatttcagtgtctgctacacagagctttacat
ccccgggagcctctgcccccaattcagcagcatattttgaatatgctggacccccccact
gaggtgacagctcaatgtcaaattccgctctctaaaataaagactgttttcccactgact
gaagccatcaagaaaaaggatcaagtgactgctcaggacattttccaagacaaccatgaa
gagggacccacttctaaaaaactgaagactgaggaaggggcggctggctttagcgtctcc
agcctggctgaaggcagcgtcaccagcgttggaagtgtgaatcctgctgaaaacttccgt
gttctagtgaggcagaagaaagccagctttgaggaagcaagtcgccaactaataaatcgc
attgagcagtttctggaaactaatgaaacaccgtattttatgaagagcttggactgcatc
acagtcttccgggaagaagccattcagttttcagaggagcagcgctttaacgatttcctg
agagcccttcgagagaaagtagaaatgaaacagttaaatcacttctgggaaattgtcgtt
caggatggaattactctgatcaccaaagatgaagcccctggaagttccgtcacagctgag
gaagccaaaaagttcctggagcctaaagaaaatccaaatgaagacacagcagccgtactt
gcagaaggtggtgacgtggatgatttactggacttgatttag
DBGET
integrated database retrieval system
