Lutra lutra (Eurasian river otter): 125095637
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Entry
125095637 CDS
T08100
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04360
Axon guidance
llv04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125095637
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
125095637
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
llv04515
]
125095637
Cell adhesion molecules [BR:
llv04515
]
Immunoglobulin superfamily
ROBO family
125095637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_PDGFR_d4
Unc5_NetrinR_N
DUF7908
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
125095637
NCBI-ProteinID:
XP_047578019
LinkDB
All DBs
Position
1:complement(32279424..33467067)
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AA seq
1654 aa
AA seq
DB search
MKWKHVPFLVTISLLSLSKDHLFLAQLIPDPEDLERGNDNGTPIPTSDNDDNSLGYTGSR
LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRM
LLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVM
VAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVC
VGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDG
ELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEVSATLTVQVGSEPPHFVVKP
RDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITN
VQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAADGTLVLSCV
ATGSPVPTILWRKDGVLVSTQDSRIKQLETGVLQIRSAKLGDTGRYTCIASTPSGEATWS
AYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIE
AFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDV
PPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGTN
HGESEWLVFEVRTPTKNSVVIPDLRKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSA
PPQSVTVSKNEGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSV
VIPSLVPGIRYSVEVAASTGAGAGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQP
AFIAGIGAACWIILMVFSIWLYRHRKKRNGLASTYAGIRKVPSFTFTPTVTYQRGGEAVS
SGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTYSRPADCIA
NYNNQLENKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQ
LIQSNLSNNMNNGSGTPARSTGNRLAQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIP
YNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHS
NSEEYSVSVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSH
QSTATLTPSPQEELQPMLQDCQEEIGHMQHQPDRRRQPVSPPPPPRPISPPHTYGYISGP
LVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSA
SEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDASGRRHFHASQC
PRPTSPVSTDSNMSAAVMQKARPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQS
KAQLEVRPVMVPKLPSVEPRTDRSSDRKVGSYKGREVLDGRQVADMRTNPGDIREAQEQQ
NDGKGRVNKATKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQR
EQANVGRRNIAEMQVLGGYERGEDNNEELEETES
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaaacatgttccttttttggtcacaatatcactcctcagcttgtcaaaagat
cacctgttcctggcccagcttattccagaccctgaagacctagagagggggaacgacaac
gggacgccaatccccacctctgataacgatgacaattcgctgggctacacaggctcccgt
cttcgtcaggaagattttccacctcgcattgttgaacacccttccgacctaattgtgtca
aaaggagaacctgccactttgaactgtaaagccgaaggccgccccacacccactatcgaa
tggtacaaagggggggagagagtggagacagacaaagatgaccctcgctcacaccgaatg
ttgctgccgagtggatctttatttttcttacgtatagtacatggacgaaaaagtaggcct
gatgaaggggtctacgtctgtgtagcaaggaattacctcggagaggccgtgagccataac
gcttcgctggaggtagccatcctacgagatgacttcagacaaaatccttccgatgtcatg
gtggcagtgggggagcctgctgtgatggaatgccagcctccacgaggccatccggaaccc
actatttcatggaagaaagatggctccccgctagatgacaaagatgaaaggataactata
cgaggtggaaagctcatgattacttacacccgcaaaagtgatgctggcaaatacgtttgt
gttggtaccaacatggttggggaacgtgagagtgaagtagcagagctaactgttctggag
agaccatcgtttgtgaagagacctagtaatttggccgtaacagtagatgacagtgcagaa
tttaaatgtgaggcccgaggtgaccctgtgcctacggtacgatggagaaaagacgatgga
gaactgcccaaatccagatacgaaatcagagatgatcataccctgaagattcggaaagtg
atggctggtgacatggggtcatacacttgtgtggcagaaaatatggttggaaaagctgaa
gtatcagctactctgactgtccaagttgggtctgaacctccacactttgttgtgaaaccc
cgtgaccaggttgttgccttgggacgaacagtaacattccagtgtgaagcaactggaaat
cctcaaccagctattttttggagaagagaggggagtcagaatctgcttttctcatatcag
ccaccacagtcaagcagccgcttttcagtctcccagactggtgatctcaccatcactaac
gtccagcgatctgatgtcggttattatatctgccagactttaaatgttgccgggagtatc
atcacaaaagcgtatttggaagttactgatgtgatcgcggaccggcctccccccgtcatc
cgacaaggtcctgtgaatcagactgtagcggcggatggtactttagtgcttagctgtgtg
gctacaggcagtccggtgcccacgattctgtggagaaaggacggagtcctcgtgtcaacc
caagattctcgaatcaaacagctggagacgggagtgctgcagatccgatctgcgaagctg
ggtgacacaggtcggtacacctgcattgcatcgacccccagtggcgaagcaacgtggagt
gcttacattgaagtccaagaatttggagttccagttcagcctccaagacccactgaccca
aatttaatccctagtgctccctcaaaacccgaagttacagatgtcagcagaaatacagta
acattgtcatggcaaccaaatttgaattcaggagcaactccaacctcttatattatagaa
gccttcagccatgcatctggtagcagctggcagaccgtagcagagaatgtgaaaacagaa
acatttgccattaaaggactcaaacctaatgcaatttaccttttccttgtgagggcagca
aatgcatatggaattagtgatccaagccagatatcagatccagtgaaaacacaagatgtt
ccccccacgagtcagggagtagatcacaagcaggtccagagagaactgggaaatgttgta
ctgcacctgcacaaccctaccatcctctcctcctcttcaatcgaagtgcactggacagtg
gaccaacagtctcagtatattcaaggatataaaattctttatcggccatctggaaccaac
cacggtgaatcggagtggttagtttttgaagtgaggaccccaaccaaaaatagcgtggtt
atccctgatctcagaaagggagtcaactatgaaattaaggctcggccattttttaatgaa
tttcaaggagcagatagtgaaattaaatttgccaaaactttagaagaagcacccagtgcc
ccaccccagagtgtaactgtatcaaagaatgaaggaaacggaactgcaattcttgttagt
tggcagccgcctccagaagacactcaaaatggaatggtccaagagtataaggtttggtgt
ctgggcaacgaaactcgctatcatataaacaagacagtggatggttccactttttctgtg
gtcattccttctctggttcccgggatccgctacagcgtggaggtggctgccagcacgggg
gccggggctggggtgaagagcgagccacagttcatccaactagattcccacggaaaccct
gtgtctcctgaagaccaagtcagccttgctcagcagatctccgacgtggtgaagcagccc
gcgttcatcgcgggcatcggggccgcctgctggatcatcctcatggtcttcagcatctgg
ctctatcgacaccgaaagaagagaaacgggctggcgagtacttacgcgggtatccgaaaa
gtcccgtcttttaccttcacaccaacagtaacttatcagagaggaggtgaagctgtgagc
agtggagggaggccaggacttctgaacatcagcgaacccgccacgcagccatggttggca
gacacgtggcccaacaccggcaacaatcacaatgactgctccatcaactgctgcacggca
ggcaatggtaacagtgatagcaacctgaccacctacagccgcccagcggattgtatagcc
aattataacaaccaactggaaaacaaacaaacaaatctgatgctccctgagtcaactgtt
tatggtgatgtggaccttagtaacaaaatcaatgagatgaaaaccttcaatagcccaaat
ctgaaggatgggcgttttgtcaatccatcagggcagcctaccccttacgccaccacccag
ctcatccagtcaaacctcagcaacaacatgaacaatggcagtgggactccagcgagaagc
actggaaaccgcctcgcccagcagaagcaggaagtggccccgattcagtataacatcatg
gagcaaaacaagctgaacaaagattatcgagcaaatgacacaattcctccaactatccca
tacaaccagtcctacgaccagaatacaggaggatcctacaacagctcggaccggggcagt
agtacatctgggagtcaagggcacaagaaaggggcacggacacctaaagtaccgaaacag
ggtggcatgaactgggcagacctgcttcccccgcctccagctcatcccccccctcacagc
aacagtgaagagtacagtgtttccgtagatgaaagctatgaccaggaaatgccgtgtccc
gtcccaccagcaaggatgtatttgcaacaggatgagctagaagaggaggaagatgaacga
ggccccactccccctgttcggggagcggcttcttctccagctgccgtgtcttacagccat
cagtccactgccactctgaccccctcccctcaagaagagctccagcccatgttacaggac
tgccaggaggagatcggccacatgcagcaccaacccgacaggagacggcagccggtgagc
ccccctccaccaccacgaccgatttccccaccacatacttacggctacatttcaggacct
cttgtctcagatatggatacggatgcgccagaagaggaagaagatgaagcagacatggaa
gtcgccaagatgcagaccagacggcttttgttacgtggccttgagcagacccctgcctcc
agtgtgggggaccttgagagctctgtcactgggtccatgatcaatggctggggctcagcc
tcagaggaggacaacatttccagtggacgctccagcgtgagttcttccgatggctccttc
ttcaccgatgccgattttgcccaggcagtggcagcagccgcggagtatgctggtctgaaa
gtggcacgtcgtcaaatgcaggatgcttctggccgccgacattttcatgcatcccagtgc
cctcgacccacaagtcctgtttctacagacagcaacatgagtgccgccgtaatgcagaag
gccagacccgccaagaagcaaaaacaccagccaggacatctgcgtagagaagcctacaca
gatgatcttccacctcctccagtgccaccacctgctataaagtcacccactgtccaatcc
aaggcacagctggaggtgcgacctgtaatggtgccaaaactcccttctgtagaaccaaga
acagacagatcatcagatagaaaagtgggcagttacaaggggcgagaagtcttggatgga
agacaagttgctgatatgagaaccaatccaggtgatatcagagaagcacaggaacagcaa
aatgatgggaaaggacgagtgaacaaggccacaaaacgagaccttccaccagcaaagact
cacctcatccaagaggatattctaccttactgcagacctacttttccgacatcaaataat
cccagagatccgagttcttcaagctcaatgtcatcaagaggatcaggaagcagacaaaga
gaacaagcaaatgtaggtcgaagaaatattgcagaaatgcaagttcttggaggatatgaa
agaggagaagataataatgaagaattagaggaaactgaaagctga
DBGET
integrated database retrieval system