Lutra lutra (Eurasian river otter): 125095719
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Entry
125095719 CDS
T08100
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04145
Phagosome
llv04814
Motor proteins
llv04962
Vasopressin-regulated water reabsorption
llv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125095719
09142 Cell motility
04814 Motor proteins
125095719
09150 Organismal Systems
09155 Excretory system
04962 Vasopressin-regulated water reabsorption
125095719
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125095719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125095719
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
llv04812
]
125095719
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
125095719
Cytoskeleton proteins [BR:
llv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
125095719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
Dynein_IC2
Beta-prop_EML
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
125095719
NCBI-ProteinID:
XP_047578111
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All DBs
Position
3:68741115..68797643
Genome browser
AA seq
632 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
EALLQSMGLTPESPIVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRTLHWDTDPSVLQLH
SDSDLGRGPIKLGMAKITQVDFPPREIVTYTKETQTPVMAQPKEDEEEEDDVVTPKPPTE
PEEEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFD
YSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAP
HEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNK
RTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH
KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA
AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGM
GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVP
RNDEWARFGRTLAEINANRADAEEEAATRIPA
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaaaagtgaattaaaggcagaattggaacgaaagaagcagaggttggcccaa
atcagagaggaaaagaagagaaaagaagaagaaaggaagaaaaaagaaactgatcagaag
aaggaagcagttgctcctgtgcaagaagaatcagatcttgaaaaaaaaagaagagaagct
gaagcattgcttcaaagcatggggctaactccagaatcccccattgtccctcctcctatg
tctccatcctccaaatctgtgagcacaccaagtgaagctggaagccaagactctggagat
ggcgcagtgggatctaggacgctgcattgggatacagatccatcagttcttcagcttcac
tcagattccgatttgggacgaggacctattaaacttggaatggctaaaattacacaagtt
gactttcctcctcgagaaatcgtcacgtatacaaaggaaactcagactccagttatggct
caacccaaagaagatgaagaggaagaagatgacgtagtgactcctaaaccccctactgaa
cctgaagaagagaaaactttaaagaaagatgaagaaaatgatagtaaagctccccctcat
gagctgactgaagaagaaaagcaacaaatcttacattcggaggaatttttaagtttcttt
gaccattctacaagaattgtagagagagcgctttctgagcagattaatatcttctttgac
tacagcggaagggatttggaagacaaagaaggagagattcaagcaggtgctaaactgtca
ttaaatcggcagttttttgatgaacgttggtcaaagcatcgtgttgttagctgtttggat
tggtcatctcagtatccagagctactcgtggcttcctataataacaatgaagatgctcct
catgaacctgatggtgtggccctggtgtggaatatgaaatacaaaaaaactaccccagaa
tatgtgtttcactgccagtcagctgtgatgtctgctacatttgcaaaatttcatccaaat
ctggttgttggtggtacatactcaggccaaattgtcctgtgggataaccgcagcaataaa
agaactccggtgcagagaactccgctgtcagctgctgcacacacacatcctgtatattgt
gtaaatgttgttggaacacaaaatgctcacaatctgattagcatatctactgatggaaaa
atttgttcatggagtctggatatgctttcccatccacaggatagcatggaattggttcat
aaacagtcaaaggcagtagctgtgacatctatgtccttccctgttggagatgtcaacaac
tttgttgttggaagtgaagaaggttctgtgtacacagcatgccgccatggcagcaaagct
ggaatcagtgagatgtttgagggacatcaaggaccaatcactggtatccattgtcatgca
gctgttggagcagtggacttctcacatctttttgtcacttcatcatttgactggacagta
aaactttggacaactaagaataacaagcctttgtactcatttgaagataattcagactat
gtttatgatgttatgtggtcacccacccacccagccctgtttgcttgtgtggatggcatg
gggaggctggatttgtggaatctcaataatgatacagaggtgccaactgccagcatttct
gtggagggtaatcctgctcttaatcgtgtaagatggacccattctggaagagagattgct
gtgggtgattctgaaggacagattgtcatttatgatgtgggagagcagattgctgtcccc
cgaaatgatgaatgggcacggttcggccgaacactcgcagaaattaatgcaaaccgagct
gatgcagaggaggaagcagctacccgaatacctgcttag
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