Lutra lutra (Eurasian river otter): 125095838
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Entry
125095838 CDS
T08100
Name
(RefSeq) nucleoporin NUP35 isoform X1
KO
K14313
nuclear pore complex protein Nup53
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03013
Nucleocytoplasmic transport
llv05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125095838
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125095838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125095838
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125095838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
125095838
NCBI-ProteinID:
XP_047578333
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All DBs
Position
3:79323079..79363489
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AA seq
329 aa
AA seq
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MAAFAVEPQAPTLGSEPMMLGSPTSPKPGVNAQFLPGFLMGDLPAPVTPQPRSISGPSVG
VMEMRSPLLAGGSPPQPVVPAHKDKSGAPPVRSIYDDISSPGLGSTPLTSRRQPNISVMQ
SPLVGVMTTTPTPGTGQSVFSPANIGQPRKTTLSPAQLDPFYTQGDSLTSEDHLDDTWVT
VFGFPQASASYILLQFAQYGNILKHVMSNTGNWMHIRYQSKLQARKALSKDGRIFGESIM
IGVKPCIDKSVMENNDRCALSSPSLAFTPPIKTLGTPTQPGSTPRISTMRPLATAYKAST
SDYQVISDRQTPKKDESLVSKAMEYMFGW
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctttgctgtggaaccccaggcgcccacgttgggatctgaaccaatgatgcta
ggttcaccaacatctccaaagccaggggttaatgcccagttcttacctggatttttaatg
ggggatttgccagctccagtaactccgcaacctcgatcaatcagtggcccttcagtagga
gtaatggaaatgagatcacctttacttgcaggtgggtcaccaccacaaccagttgtacca
gctcataaagataaaagtggagctccaccagttagaagtatctatgatgatatttccagc
ccaggacttggatcaacacctttaacttcaagaagacagccaaatatttcagtaatgcag
agtcctcttgttggagttatgacaactactcctactcctggaacaggacaaagtgtgttt
agtccagcaaacattggtcaaccacgaaagacaacattatctcctgcacagttggatcct
ttttatactcaaggagattctctgacttctgaagatcacctcgatgacacttgggtgact
gtgtttgggtttcctcaagcatctgcttcctatatattattacagtttgcacagtatggg
aatatcttaaaacatgtgatgtctaacacaggaaattggatgcatattcgttatcaatct
aaactgcaggcccggaaagccttaagcaaagatgggaggatttttggagagtccatcatg
attggtgtaaagccatgtatagataaaagtgttatggaaaacaatgacaggtgtgcttta
tcatctccatctctagcctttacaccaccaatcaaaaccttaggtacaccaacccaacct
ggaagtactcctaggatttctaccatgagacctcttgctacagcatataaagcttctact
agtgactatcaggttatttctgacagacaaacgccaaaaaaagatgaaagtctggtatcc
aaagcaatggagtacatgttcggctggtag
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