Lutra lutra (Eurasian river otter): 125096017
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Entry
125096017 CDS
T08100
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125096017
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
llv04812
]
125096017
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
125096017
Cytoskeleton proteins [BR:
llv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
125096017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
CEP104-like_TOG
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Cnd1
HEAT_2
RTP1_C1
HEAT_DAAF5
MMS19_N
ParcG
TAN
MMS19_C
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
125096017
NCBI-ProteinID:
XP_047578587
LinkDB
All DBs
Position
3:complement(106481447..106759897)
Genome browser
AA seq
1620 aa
AA seq
DB search
MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGTCLCLVATLNASGAHTLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS
DIDVNAAASAKSKVSSASGATPFSSAAALPPGSYASLESRHVREDTESVGLDAGRIRTRR
QSSGSATNVATTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLAGGS
SRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRNTSCESSRDT
SPARGFPPLDRFGLGQAGRGPGSVNAMRVLSTSTDLEAAVADALLLGDSRSKKKPVRRRY
EPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGL
LGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKIADSEPECEDKEGNLFPSEGSCTRV
FSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFD
QQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTE
PKSSDVRKSPLQRSRVGEDFPTRSAAACSGPGEGNLEENCKQAAQIVLISLFELNTPEFT
MLLGALPKTFQDGATKLLHNHLKNASNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNCSH
GGLSPSRLWGWSADGLSKHPPPFSQPNSIPTAPSHKTLRRSYSPSMLEYDTENLNSEEIY
SSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGGVASPATEGRGGSDVVEGGR
TALDNKTSLLNTQPPRAFPGPRVRDYNPYPYSDTINTYDKTALKEAVFDDDMEQLRDVPI
DHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDK
DHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSI
HPEQCIKVLCPIIQTADYPINLAAIKMQTKVVERIAKESLLQLLADIIPGLLQGYDNTES
SVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcgcatggagtcctgcctggcacaggtgttgcagaaggatgtggggaaacga
ctacaggttggccaagaacttatagactatttctcagacaaacagaagtctgctgacctt
gaacatgaccagaccatgttagataaacttgtggatgggcttgctacctcttgggtgaac
tctagcaattacaaggtggttcttctcggcatggacatcctgtccgcactggtcacccgg
ctgcaggaccggttcaaggcacagattggcacagtgctgccaagtttaatagacagactg
ggagacgctaaagactctgtgcgagagcaagaccagactttgctgctgaagatcatggat
caagctgctaatccccagtatgtgtgggaccgaatgctgggaggcttcaagcacaagaat
ttccggactcgggaaggcacgtgcctctgccttgttgctacactcaatgcctctggagca
catactttaacactaagcaagattgtgccacatatatgtaatttacttggagatccaaac
agccaggttcgagacgcagcaataaacagcttagtggagatttacagacacgtgggagaa
cgtgtgagggcagacctcagtaagaaaggattgccgcagtcccggttgaatgtaattttt
acaaaatttgatgaagtccaaaaatctggaaacatgatacagtcagcaaacgataaaaat
tttgatgatgaagattctgtggatggtaatagaccttcctctgctagttctacatcatcc
aaagctccgcccagctcacggagaaatgttggaatggggaccacccgccggcttgggtca
tccactctgggatccaagtcttcagctgcaaaagaaggagctggtgctgtcgatgaagag
gactttattaaagcatttgatgatgtacctgtcgtgcagatttattccagccgagacctt
gaggaatccataaacaagattagggaaatattatctgatgacaagcatgattgggagcaa
agagtaaatgctctaaaaaagataagatctttacttttggctggtgctgctgagtatgat
aacttctttcaacatttgcgtcttttggatggagcctttaaactctctgctaaggacctg
cggtctcaggtagtgcgggaggcttgtatcaccttggggcatctgtcatcagttctggga
aataagtttgaccatggagctgaagccattatgccaactatttttaatttaattccaaat
agtgccaaaattatggccacttctggtgttgtagctgttaggttaatcattcggcacaca
cacatccctaggctaatacctgtcataacaagcaactgtacctctaagtctgtcgcagtt
agaaggcgctgttttgaatttttagatttacttttacaagagtggcagacacattcactg
gaacgacatatatcagtattagccgaaacaataaagaagggaatacatgatgcggattct
gaagcaaggatagaagccagaaagtgctattggggttttcacagtcacttcagcagagaa
gcagagcacctgtaccacaccctcgagtcctcctaccagaaagccctgcagtcccacctg
aagaactccgacagcatcgtgtctctgccgcagtccgatcgctcatcctccagctctcag
gagagtctgaaccgaccgctctctgccaaaagaagtcctactggaagcaccacctctaga
gcttctacagttagtaccaaatccgtgtcaacgactgggtccctccagcggtctcgaagc
gatattgatgtgaacgcagcagccagtgccaagtccaaggtgtcctcggcctcgggcgct
acgcctttcagctctgcagcggccttacctcccgggtcatacgcatccttagagtccaga
cacgtgagggaagatacggagtccgtaggccttgacgcaggtcggatccgcacgagacgg
cagagctccgggagcgccaccaatgtcgccaccacacctgacaatcgaggccgcagtcgc
gccaaagtggtttcacagtcccagcgatccagatctgctaatcctgctggtgctggcagc
cggtcaagttccccagggaaattgttgggaagtggttatggtggccttgctgggggttcc
tcaagaggcccacctgtgaccccctcttcagaaaaacgaagcaagattcccaggagtcag
ggatgtagccgagaaacaagtccaaaccgaataggattagcacggagcagccgtatccct
cgacccagcatgagtcaggggtgcagccgtaataccagctgtgagagcagccgcgatacg
agccccgctcggggctttcctccactcgaccggtttgggcttggccaggcaggaagagga
cctggctctgtgaatgccatgcgagttctgagcacgagtacagaccttgaggctgctgtt
gctgatgctttgctgttaggagactccaggagcaagaagaagcctgtgaggaggaggtac
gagccatatgggatgtactctgatgacgacgccaatagcgacgcctcaagtgtttgctct
gagcgctcgtacggctccaggaacggtggcattccccattatctgcggcagacggaggac
gtggcggaagttctcaaccactgtgccagttccaactggtcagaaaggaaagaagggctc
ctaggcctgcagaacttactgaagagccaaagaacactgagtcgagtagaattgaaaaga
ctgtgtgagatcttcacccgaatgtttgctgaccctcacagcaagattgctgattcagaa
ccagaatgtgaggataaagaaggaaatttgtttccatcagaaggctcttgtacaagagtt
ttcagtatgtttttggagactcttgtggattttataataattcataaggatgacttgcaa
gactggctttttgttcttctcacacaattacttaagaaaatgggagcagacttacttgga
tctgtgcaggcaaaagttcagaaggctctagatgtcaccagggactcctttccatttgat
caacagtttaacattttgatgagatttattgtggatcaaactcaaactcctaacctcaag
gtcaaagttgcaatcctgaagtacattgagtccctcgctcggcagatggatccaacagat
tttgtaaactctagtgagacgaggctggctgtttctagaattataacctggacgacagaa
ccaaagagttcagacgtgagaaagtccccgctccagcgtagtcgcgtaggtgaggatttc
cccactaggtcagctgctgcctgctctgggcctggagaaggaaacttggaagaaaattgt
aaacaggcagcacaaattgtgttgatctctctgtttgaattgaacactcctgaatttacc
atgttacttggtgccttgccaaaaacattccaggatggtgccaccaaactcctgcataac
cacctcaagaacgctagtaacaccagtgtgggctctccgagcaatacaattggccgaact
ccctcccgacacaccagcagcaggaccagccccctgacctcacccaccaactgttcccat
gggggcctatctcccagtcggttgtggggttggagtgccgatggcctatcgaagcaccca
cctcccttttctcagcccaactccattcccaccgctccctcccacaagactctcaggcgc
tcttactctcccagcatgctggagtatgatacagagaacctgaactctgaagaaatttat
agttctctgcgtggagttacggaagccattgaaaagtttagttttcgaagccaagaggat
ctgaatgagccaattaaacgggatggcaagaaggactgtgatattgtgtcccgtgatggt
ggagttgcctcgcctgccactgaaggccggggcggcagcgatgtggtggagggaggcaga
acagctctggataacaagacatccctcctcaacacccagcctccccgcgccttcccaggg
ccccgggtgcgagactacaatccatacccgtactccgacaccatcaacacctatgacaag
acagccctgaaggaggccgtgtttgatgatgacatggagcagcttcgagatgtgcccatt
gaccattcggacttggtggctgaccttctgaaagagctgtccaaccacaacgagcgagtg
gaggagcggaaaggtgccctgctggagctgctcaagatcacgcgcgaggacagcctgggc
gtgtgggaggagcatttcaagaccatcctgctcctgctgctggagacgctcggggacaaa
gaccattccatccgagcactagcactgagggttttacgagaaattctgaggaaccagcca
gcaagatttaaaaactacgccgagctgaccattatgaagactctggaagcccataaagat
tcccataaggaggtagtgagagcggctgaggaggcggcgtccacgctggccagctccatc
cacccagagcagtgcatcaaagttctctgtcccatcatccaaacagccgactaccctatc
aacctcgccgccatcaagatgcagaccaaagtcgtcgagaggatcgccaaggagtccttg
ctgcagctcctcgctgacatcatcccaggcttgctacagggctatgacaacaccgaaagc
agtgtacgtaaggccagcgtgttttgcttagtggcaatttattccgtaattggagaagag
ctgaaacctcacctcgcgcagctcacggggagcaagatgaagctactaaacttatatata
aagagggcccaaaccacgaacagcaacagcagctcctcctccgacgtatccacacacagc
taa
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