KEGG   Lutra lutra (Eurasian river otter): 125096082
Entry
125096082         CDS       T08100                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03020  RNA polymerase
llv03420  Nucleotide excision repair
llv05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125096082
  09124 Replication and repair
   03420 Nucleotide excision repair
    125096082
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    125096082
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:llv03021]
    125096082
   03400 DNA repair and recombination proteins [BR:llv03400]
    125096082
Transcription machinery [BR:llv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     125096082
DNA repair and recombination proteins [BR:llv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      125096082
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 125096082
NCBI-ProteinID: XP_047578699
LinkDB
Position
3:complement(113075472..113087883)
AA seq 142 aa
MAAGGSDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggccggtgggagcgacccgcgggccggcgacgtggaggaggatgcctcacagctt
atcttccccaaagagtttgaaacagctgagacactgctaaattcagaggttcatatgctt
ctggagcatcgaaagcaacagaatgagagtgcagaggatgaacaggagctttctgaggtc
ttcatgaaaaccttaaattacacagcccgtttcagtcgtttcaaaaacagagagaccatt
gccagtgtccgtagcttgttgctccagaagaagcttcataagtttgagttggcctgtttg
gccaacctttgcccagagactgctgaggagtcaaaggcgctgattccaagcctggagggt
cggtttgaagatgaagagttacagcagattcttgatgatatccagaccaagcgcagcttt
caatattaa

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