Lutra lutra (Eurasian river otter): 125096157
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Entry
125096157 CDS
T08100
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
llv03037
]
125096157
Cilium and associated proteins [BR:
llv03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
125096157
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_7
TPR_19
TPR_6
TPR_14
TPR_16
ANAPC3
TPR_11
TPR_10
TPR_17
ARM_TT21_4th
TPR_CcmH_CycH
ARM_TT21_5th
ARM_TT21_N
TPR-S
TPR_21
ARM_TT21_C
TPR_15
DUF6584
RPN7
HEAT_Nup120
HAT_PRP39_C
ARM_TT21_2nd
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
125096157
NCBI-ProteinID:
XP_047578818
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Position
3:118867778..119029932
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AA seq
825 aa
AA seq
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MMQNVHLAPETDEDDLYSGYNDYNPTYDTEELENDTAFQQAVRTSHGRRPPITAKIPSTA
VTRPVATGYGSKTSLASSMGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLGQSR
GPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVR
QREQVTTPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMS
MAPNLKAGFNLILSYFAVGDRDKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNLVIEAI
KNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAIGYDWCVEVVKASQYVELANDLEI
NKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD
CFLKLHAILRNSAQVLFQIANVYELMEDPNQAIEWLMQLISVVPTDSRALSKLGELYDSE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLM
VASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKM
KEIREQRIKSGRDSSGGSRSRREGSAGSDSGQICSASSKGERLSAKLRALPGTNEPYESS
SNKEIDASYVDPLGPQVERPKTAAKKRIDEDDFADEELGDDLLPE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtacacctggccccagagacagatgaagatgatctttattctggttat
aatgactacaatccaacctatgatactgaggaattagagaatgacacagcttttcagcaa
gcagtgagaactagtcatggcagaagacctccaataactgctaaaataccaagcacagca
gttactagacctgtagctactggatatgggtccaagacatccctggcatcctcgatggga
agaccaatgacaggggctattcaggatggagttactagaccaatgacagcagtgagagca
gctggttttaccaaagcagctttgagaggctctgcatttgacccccttggtcagtcaagg
ggccctgctcctcctctggaagccaaaaatgaagatagtccagaagaaaagattagacaa
ttagagaagaaagtaaatgaattggtagaagaaagctgtattgccaacagctgtggagac
ttaaaattggccttagaaaaggcaaaagatgcaggaagaaaagagagagtcttggtgaga
caacgagaacaagttacaactccagaaaatatcaatttggatttaacatactcagttctt
ttcaacttggctagtcaatattcagctaatgaaatgtatgctgaagcactaaacacatat
caagttatagtgaaaaataagatgtttagcaatgcaggaagattgaaagtgaatatgggc
aatatttatttaaagcaaagaaattattccaaagccattaaattctaccgaatggcacta
gatcaaattccaagcgtccataaagaaatgaggattaaaatcatgcagaacattggtgtt
acatttataaaaactggtcagtattcagatgccattaattcatttgagcacatcatgagt
atggcaccaaatctgaaggcaggcttcaacctaattcttagttactttgctgttggagat
cgagacaaaatgaagaaggcattccaaaaattgattgctgttccattagaaattgatgaa
gatgataaatatatttcaccaagtgatgacccacacactaacttagtgattgaagctata
aaaaatgatcatctaaggcaaatggaacgtgaaaggaaagccatggcagaaaaatacatc
atgacagccgcaaaactcattgctcctgtaattgaaacatcttttgctataggttatgat
tggtgtgttgaagttgtgaaagcttctcagtatgtagagttagcaaatgatctggaaata
aacaaagcaattacatacttgagacaaaaggactttaatcaagctgtagagaccttaaaa
atgtttgaaaaaaaggacagtagagtgaaaagtgcagctgcaaccaacctctcatttctt
tattatttggaaaatgaatttgcacaagccagcagctatgcagatttagctgtgaactct
gatagatataatccctcagctctcactaataaagggaatacagtttttgcaaatggtgac
tatgagaaggcagctgaattctataaagaggctctaagaaatgattcttcttgtactgaa
gcactttacaatattggccttacctataagaagctaaatcggcttgatgaggctttggat
tgtttcctgaaacttcacgcaatcctgagaaacagtgcccaagttcttttccagatagca
aatgtatatgaattaatggaagatcccaatcaagctattgaatggttaatgcagctgatc
agcgttgttccaaccgactctagagctttgtctaaactaggagaattatatgatagtgaa
ggggataaatcccaagcatttcaatattactatgagtcatacaggtatttcccctctaac
attgaagtcattgagtggcttggagcctattacattgacacccagttttgtgaaaaagcc
attcaatactttgaaagagcttctcttatacagcctacacaagtgaaatggcagctgatg
gtagctagttgttttagaagaagtggtaactaccaaaaagcattagatacttataaggat
attcacagaaaatttccagaaaatgttgaatgtctgcgtttcttggttcgtctctgcaca
gatattggattaaaagaagttcaagaatatgcaacaaaactcaagagattggaaaaaatg
aaagaaataagggaacagcgcataaagtctggcagagacagcagtgggggctcccgcagc
agaagagaggggagtgccggcagcgatagtggccagatctgtagtgccagtagtaaaggt
gaacgactaagtgccaaactcagagctttacctgggacaaatgaaccttatgaaagtagc
agtaacaaagaaatagatgcctcctatgtggatccacttggccctcaagtagaaagacca
aaaactgcagccaaaaaaagaatcgatgaggatgattttgctgatgaagaattaggagat
gatttgcttcctgaataa
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