Lutra lutra (Eurasian river otter): 125096199
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Entry
125096199 CDS
T08100
Name
(RefSeq) transient receptor potential cation channel subfamily M member 8 isoform X1
KO
K04983
transient receptor potential cation channel subfamily M member 8
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
125096199
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
llv04040
]
125096199
Ion channels [BR:
llv04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125096199
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRPM2
LSDAT_euk
YVC1_C
LSDAT_prok
Ion_trans
YqxI
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
125096199
NCBI-ProteinID:
XP_047578902
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All DBs
Position
3:41716246..41813888
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AA seq
1104 aa
AA seq
DB search
MSFEGARLSMRNRRNGTLDSTRTLYSSMSRSTDVSYSESDLVNFIQANFKKRECVFFTKD
SKATDNVCKCGYTQSQHIEGTQINPNEKWSYKKHTKEFPTDAFGDIQFETLGKKGKYIRL
SCDTDAETLYELLTQHWHLRTPNLVISVTGGAKNFALKPRMRKIFSRLIYIAQSKGAWIL
TGGTHYGLMKYIGEVVRDNTISRNSEENIVAIGIAAWGMVSNRDTLLRNCDAEGYFSAQY
IMDDFKRDPLYILDNNHTHLLLVDNGCHGHPTVEAKLRNQLEKYISERTIQDSNYGGKIP
IVCFAQGGGKETLKAINTSIKSKIPCVVVEGSGQIADVIASLVEVEDALTSSVVKEKLVR
FLPRTVSRLPEEETESWIKWLKEILESSHLLTVIKMEEAGDEIVSNAISYALYKAFSTNE
QDKDNWNGQLKLLLEWNQLDLASDEIFTNDRRWESADLQEVMFTALIKDRPKFVRLFLEN
GLNLRKFLTNDVLTELFSNHFSTLVYRNLQIAKNSYNDALLTFVWKLVANFRRGFRKEDR
SSRDDIDVEFHDVSPITRHPLQALFIWAILQNKKELSKVIWEQTRGCTLAALGASKLLKT
LAKVKNDINAAGESEELANEYETRAVELFTECYSSDEDLAEQLLVYSCEAWGGSNCLELA
VEATDQHFIAQPGVQNFLSKQWYGEISRDTKNWKIILCLFIIPLVGCGFVSFRKKPIDKH
KKILWYYVAFFTSPFVVFAWNVVFYIAFLLLFAYVLLMDFHSVPHSPELVLYALVFVLFC
DEVRQWYMNGVNYFTDLWNVMDTLGLFYFIAGIVFRLHPSNKTSLYSGRVIFCLDYIIFT
LRLIHIFTVSRNLGPKIIMLQRMLVDVFFFLFLFAVWMVAFGVARQGILRQNEHRWRWIF
RSVIYEPYLAMFGQVPSDVDGTTYDFSHCTFTGNESKPLCVELDEHNLPRFPEWITIPLV
CIYMLSTNILLVNLLVAMFGYTVGTVQENNDQVWKFQRYFLVQEYCNRLNIPFPFVVFAY
FYMVVKKCFGCCCRERNAEPSACCFRNEDNETLAWEGVMKENYLVKINTKANDASEEMRH
RFRQLDTKINDLKGLLKEIANKIK
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgagggggccaggctcagcatgagaaacagaaggaatggcacgctggacagc
acccggacgctgtactccagcatgtctcggagcacggacgtgtcctacagcgaaagcgac
ttggtgaattttattcaagcaaattttaagaaacgggaatgtgtcttctttaccaaagat
tccaaggccacggacaatgtgtgcaagtgtggctacacccagagccagcacatagaaggc
acccagatcaacccaaatgagaaatggagttataagaaacacaccaaggaatttccgacg
gatgcctttggggatattcagtttgagactctggggaagaaagggaagtatatccgcttg
tcctgtgacacggacgcggagaccctctatgagctgctgacccagcactggcacctgaga
acgcccaaccttgtcatttctgtgactggtggtgccaagaacttcgccctgaagccgcgc
atgcgcaagatcttcagccgcctcatctacatcgcgcagtccaaaggcgcctggattctc
actggaggcacccattatggcctgatgaagtacatcggggaggtggtgagagacaacacc
atcagcaggaattcagaggagaacatcgttgccattggcatagcagcttggggcatggtc
tcgaacagggacaccctcctcaggaattgtgatgctgagggatatttctcagctcagtac
ataatggatgacttcaagagagaccctctgtatatcctggacaacaatcacactcatctg
ctgctcgtggacaacgggtgccatggacatcctacagttgaagcaaaacttcggaatcag
ctggagaagtacatctctgagcgcactattcaagattccaactatggtggcaagatcccc
attgtgtgtttcgcccaaggaggtggcaaagagactttgaaggccatcaacacctccatc
aaaagtaaaatcccctgtgtggtggtggagggctcagggcagattgcagacgtgatcgcg
agcctggtggaggtggaggatgccctgacatcatccgtggtcaaggagaagctggtgcgc
ttcttaccccgcacggtgtcccggctgcccgaggaggagactgagagttggatcaaatgg
ctcaaagaaattcttgaaagttctcacctattaacagttattaaaatggaagaagctggg
gatgaaattgtgagcaatgctatttcctatgctttgtataaagcctttagcaccaatgaa
caagataaggataactggaatgggcagctgaagcttctgctggagtggaaccaactggac
ctcgccagtgacgagatcttcaccaatgaccgccgatgggagtctgcagaccttcaagaa
gtcatgttcacggctcttataaaggacaggcccaagtttgtccgcctctttctggagaac
ggattgaacctgcggaagtttctcaccaacgacgtcctcactgaactcttctccaaccac
ttcagcaccctcgtctaccggaacctgcagattgccaagaattcatataatgatgccctc
ctcacatttgtttggaaactggtggctaactttcggagaggcttccggaaggaagacaga
agtagcagggatgacatagatgtagaatttcacgacgtgtctcctatcactcggcaccca
ttgcaagcacttttcatctgggccattcttcagaacaagaaggaactctccaaggtcatt
tgggagcagaccaggggctgcactctggcagccctgggagccagcaagcttctgaagact
ctggccaaggtgaagaatgacatcaatgccgcaggggagtctgaggagctggccaatgag
tatgagacccgtgcagttgagctgttcacagagtgctacagcagtgacgaggacctggcg
gagcagctgctggtgtactcctgtgaagcctggggcggaagcaactgcttagagctggcg
gtggaggccacggaccagcacttcatcgcccagcctggggtccagaattttctttccaag
caatggtatggagagatttcccgagacaccaagaactggaagattatcctgtgtttgttt
attatccccttggttggctgtggctttgtatcctttaggaagaagcccatcgacaagcac
aagaagatcctttggtactatgtggccttcttcacctccccgtttgtggtctttgcctgg
aacgtagtcttctacattgccttcctcctgctctttgcctatgtgctgctcatggatttt
cactccgtgccacactcccccgagctggtcctctacgcactggtctttgtcctgttctgt
gatgaagtgagacagtggtacatgaatggggtgaattattttactgacctgtggaatgtc
atggacacacttgggcttttttacttcatagcaggcattgtatttcggctccacccttct
aataaaacctctctgtattccggacgagtcatcttttgcctggattacattatattcact
ctaaggttgatccacattttcactgtaagcagaaatttaggacccaagattataatgttg
cagaggatgctggtcgacgtgttcttcttcctgttcctctttgctgtgtggatggtggcc
tttggcgtggccaggcaagggatcctcaggcaaaatgagcatcgctggaggtggatattc
cgctcagttatctacgagccctatctggccatgtttggccaggtgcccagtgacgtggat
ggtaccacgtatgacttttcccactgcaccttcactgggaatgagtccaagcccctgtgt
gtggagctggatgagcacaacctgcctcggttccccgagtggatcaccatccccctggtg
tgcatctacatgctctccactaacatcttgctggtcaacctgctcgttgccatgtttggc
tacactgtgggcactgtccaggagaacaacgaccaggtctggaagttccagaggtacttc
ctggtgcaggagtattgcaaccgtctgaacatccccttccccttcgtggtcttcgcctac
ttctacatggtggtcaagaagtgcttcgggtgctgctgcagggagagaaatgccgagcct
tccgcctgctgtttcagaaatgaagacaacgagactctggcgtgggagggtgtcatgaaa
gaaaattacctcgtcaagatcaacacgaaagccaatgatgcctcggaggaaatgagacat
cgctttagacagctggatacaaagattaatgatctcaagggtcttctgaaagagattgct
aataaaatcaaatag
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