Lutra lutra (Eurasian river otter): 125096290
Help
Entry
125096290 CDS
T08100
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125096290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125096290
03400 DNA repair and recombination proteins [BR:
llv03400
]
125096290
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
125096290
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
125096290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
EnP1_C
Motif
Other DBs
NCBI-GeneID:
125096290
NCBI-ProteinID:
XP_047579073
LinkDB
All DBs
Position
3:129560169..129755670
Genome browser
AA seq
1449 aa
AA seq
DB search
MAHSKTRTNDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYA
LQSAAGKDAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYL
YATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVMVITRNLPDPG
KAQDFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEM
IKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTH
PISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKK
GPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQ
FAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMK
NNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIIT
LEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQ
CLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKEC
LWFVLEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPARFFTQPDKNFSNTKNYLPPEMKSFFTPGKPKTTNVLGAVNKPLSS
AGKQSQTKSSRMETVSNASSSSNPSSPGRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDK
RDDSDLVRSELDKPRSRKKTPVTDSEEKLGMDDLTKLVQEQKPKGSQRGRKRGHTASESD
EQQWPEEKRLKEDILENEDEQNSPPKKGKRGRPPKPLGGGTPKEEPTMKTSKKGTKKKSG
PSAPEEEEEEERQSGNTEQKSKSKQHRTSRRAQQSRAESPEGSAVESTQSTPQKGRGRPS
KTPSPSQPKKNVRVGRSKQASTKENDSSEEVDVFQGSSPVNDDIPQEETEEEEVSTVNVR
RRSSKRERR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggctcattcaaagacaagaaccaatgatggaaaaattacttatcctcctggtgtcaag
gaaatctcagataaaatatctaaagaggagatggtgagacggttaaagatggttgtgaaa
actttcatggatatggaccaggactctgaagaagaaaaggagctatatttaaacctagct
ttacatcttgcttcagattttttccttaagcatcctgacaaagatgttcgcttactggta
gcctgctgccttgctgatattttcaggatttatgctcctgaagctccttacacgtcccct
gataaactaaaggatatatttatgtttataacaaggcagttaaaggggctggaagataca
aagagcccacagttcaataggtatttttacttacttgagaacattgcttgggtcaagtca
tataacatatgctttgagttggaagatagcaatgaaatttttacccaattatacagaaca
ttattttcagttataaacaatggtcacaatcagaaagttcatatgcacatggtagacctc
atgagttctataatttgtgaaggtgatacagtatctcaggagcttttggatacagttttg
gtaaatctggtacctgcccataagaatttaaacaagcaagcgtatgatttggcaaaggct
ttactgaagaggacagctcaagctattgaaccatatattaccaatttttttaatcaggtt
ctgatgcttggaaaaacatctatcagcgatttgtcagagcatgtctttgacttaattttg
gagctctataatattgatagtcatttgctgctctctgttttaccccaacttgaatttaaa
ctaaagagcaatgataatgaggaacgcctacaagttgttaaactattggcaaaaatgttt
ggtgcgaaggattcagaattggcttctcaaaacaaaccactttggcagtgttacttgggc
aggtttaatgacatccatgtaccaatccgcttggaatgtgtgaagtttgctagtcattgt
ctcatgaaccatcctgatttagcaaaggacttaacagaatatcttaaagtgaggtcacat
gaccctgaagaagctattagacatgatgttattgtgtccatagttacagctgctaaaaag
gatattcttctggtcaacgatcacttacttaattttgtgagagagagaacattagacaaa
cggtggagagtgcgcaaagaagccatgatgggacttgcccaaatttataagaagtatgct
ttacaatcagcagctggaaaagatgctgcaaaacagatttcatggatcaaagacaaattg
ctacatatatattatcaaaatagtattgatgatcgattgcttgttgaacgcatctttgct
caatacatggttccccacaatttggaaactacagaacggatgaagtgtctatattacttg
tatgccacactggatttaaatgctgtgaaagcattgaatgaaatgtggaaatgtcaaaat
ctgctccgacatcaagtaaaggatttgcttgatttaattaagcaacccaaaacagatgcc
agtgtcaaggcaatattttcaaaagtgatggttattacaagaaatttgccagatcctggt
aaggctcaggatttcatgaagaagttcacacaggtgttggaagatgatgagaaaataaga
aaacagttagaagtactcgttagtccaacatgctcctgcaagcaggctgaaggctgtgtg
cgtgaaataactaagaagttgggcaaccccaaacagcctacaaatcctttcctggagatg
atcaagtttcttttggagaggatagcacctgtacacatagatactgaatctatcagtgct
cttattaagcaagtgaataaatcaatagatggaacggcagatgatgaagatgagggtgtt
ccaactgatcaagccatcagagcaggtcttgaactgcttaaggtactttcatttacacat
cccatctcgtttcattctgctgaaacatttgaatctctcctggcttgtctgaaaatggat
gatgaaaaagtagcagaagctgcactccaaatttttaaaaacacaggaagcaaaattgaa
gaagatttcccacatatcagatcagctttgcttcctgttttacatcacaaatctaaaaaa
ggacccccccgccaagccaaatacgccattcattgtatccatgcgatattttctagtaaa
gagacccagtttgcacagatatttgagcctctacataagagcctagatccaagcaacctg
gaacatctcataacaccgttggttactattgggcatattgctctccttgcacctgatcaa
tttgctgctcctttgaagtccttggtagctactttcattgtgaaagatcttctcatgaat
gatcggctcccaggaaaaaagacaactaaactttgggttccagatgaagaagtttctcct
gagacaatggtcaaaattcaggctattaaaatgatggttcgatggcttcttggaatgaaa
aataatcacagtaaatcaggaacatctaccttaagattgctaactacaatattgcatagt
gatggagacttgacagaacaggggaaaattagtaaaccagatatgtcacgtctgagactt
gctgctgggagtgctattgtgaaactggcacaagaaccttgttatcatgaaatcatcaca
ttagaacagtatcagctctgcgcattagctatcaatgatgaatgctatcaagtaagacaa
gtgtttgctcagaaacttcacaaaggcctttcccgattaaggcttccacttgagtatatg
gcaatctgtgcactttgtgcaaaagatcctgtaaaagagagaagagctcatgctaggcaa
tgtctggtaaaaaatataaatgtgagacgcgagtatctgaagcaacatgcagctgttagt
gaaaaattactgtctcttctaccagaatatgttgttccatatacaattcaccttttggca
catgacccagattatgtcaaagtacaggatattgaacaacttaaagatgttaaagaatgt
ctttggttcgttctagaaatactaatggctaaaaacgaaaataacagtcatgcatttatc
agaaagatggtagaaaatattaaacaaacaaaggatgcccaaggaccagatgatgcaaaa
atgaatgaaaaactgtacactgtgtgtgatgttgccatgaatatcatcatgtcaaaaagc
accacatacagtttggaatctcctaaagacccagtactaccagctcgttttttcacccaa
cctgacaagaatttcagtaacaccaaaaattacctgcctccagaaatgaaatcatttttc
actcctggaaaacctaaaacaaccaatgttctaggagctgttaataagccactttcatca
gcaggcaagcaatctcagacaaagtcatctcgaatggaaactgtaagcaatgcaagcagc
agctcaaatccaagctctcctggaagaataaaagggaggcttgatagctctgaaatggat
cacagtgaaaatgaagattacacaatgtcctcacctttgccaggaaaaaaaagtgacaag
agagacgactctgatcttgtaaggtctgaattggacaaacctagaagccggaaaaaaaca
cctgtcacagattcagaagagaaattaggtatggatgacctcactaagttggtacaggaa
cagaaacctaaaggtagtcagcgtggacggaagagaggccacacggcttcagaatcagat
gaacagcagtggcctgaggaaaagaggctcaaagaagatatattagaaaatgaggatgaa
cagaatagtccaccaaagaaaggtaaaagaggtcgaccacctaaacctcttggtggaggt
acaccaaaagaagagccaacaatgaaaacttctaaaaaaggaaccaaaaaaaaatctgga
ccttcagcaccagaagaagaggaagaagaagaaagacaaagtggaaatacagaacagaag
tcaaagagcaaacagcaccgaacatcaaggagagcacaacagagcagagcagaatctcct
gaaggtagtgcagttgaatccacacaatccacaccacaaaaaggacgaggaagaccatca
aaaacgccatcaccatcacaacccaaaaaaaatgtccgtgtaggacgctccaaacaagca
tctactaaagaaaatgattcaagtgaagaagtagatgtgtttcagggtagctctcctgtc
aatgatgatattccacaggaagaaacagaggaagaagaagtttctacagtaaatgtacgg
cggcgaagttctaaaagagaaaggcgatga
DBGET
integrated database retrieval system
