Lutra lutra (Eurasian river otter): 125096302
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Entry
125096302 CDS
T08100
Name
(RefSeq) replication factor C subunit 3 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03030
DNA replication
llv03410
Base excision repair
llv03420
Nucleotide excision repair
llv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125096302
03410 Base excision repair
125096302
03420 Nucleotide excision repair
125096302
03430 Mismatch repair
125096302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llv03032
]
125096302
03036 Chromosome and associated proteins [BR:
llv03036
]
125096302
03400 DNA repair and recombination proteins [BR:
llv03400
]
125096302
DNA replication proteins [BR:
llv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125096302
DNA Replication Termination Factors
ELG1-RFC complex
125096302
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125096302
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125096302
Check point factors
HRAD17(Rad24)-RFC complex
125096302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
ABC_tran
AAA_2
zf-HC2
AAA_11
ATPgrasp_ST
DUF2247
Motif
Other DBs
NCBI-GeneID:
125096302
NCBI-ProteinID:
XP_047579088
LinkDB
All DBs
Position
3:130690984..130709526
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPSSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELY
GVGVEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ
LETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL
AVRVPAPSIEDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPF
SADQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELL
HNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMALYKKFMEDGLEGMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagcctctgggtggacaaataccggcccagctcgttgggacgactggactatcacaag
gagcaggcggcccagctgcgcaacctggtgcagtgtggtgattttcctcatctcttagtg
tatggaccatcaggggctggaaaaaagacaagaattatgtgtattctacgtgaactttat
ggtgttggagtggaaaaattaagaattgaacatcagaccatcacaactccatctaaaaag
aaaattgaaattagcactattgcaagcaattatcaccttgaagttaatcccagtgatgct
ggaaatagtgaccgggtagtaattcaggagatgttgaaaacagtggcacaatcacagcaa
cttgaaacgaactctcaaagagattttaaagtggtattattgacagaggttgacaaactc
accaaagacgctcaacatgccttgcgcaggaccatggaaaagtatatgtccacttgcaga
ttgatcttgtgttgcaattctacatctaaagtgataccaccgattcgcagtaggtgcctg
gcggttcgtgtgcctgctcccagcatcgaagatatttgtcatgtattatctactgtgtgc
aagaaggaaggtttgaatcttccttcacaactggctcatagacttgcagagaagtcctgt
aggaatctccgtaaagccctacttatgtgtgaagcctgcagagtgcaacaatatcctttt
agtgcagatcaagaaatccctgaaacagattgggaggtgtatctcagggagactgccaat
gctattgtcagtcagcagactccacaaaggctccttgaagttcgtggaagactttatgag
cttctaactcattgtattcctcctgaaataataatgaagggccttctctcagaactttta
cataattgtgatggacaactgaaaggggaagtggcccagatggctgcttactatgaacat
cgtctacagctgggtagcaaagccatttatcacttggaagcatttgtggccaaatttatg
gcactttataagaagtttatggaggatggattggaaggcatgatgttttga
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