Lutra lutra (Eurasian river otter): 125096332
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Entry
125096332 CDS
T08100
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125096332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125096332
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125096332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
125096332
NCBI-ProteinID:
XP_047579176
LinkDB
All DBs
Position
3:133565605..133572965
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AA seq
276 aa
AA seq
DB search
MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVIC
GIKAEFAAPPTDGPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQ
KEDLCISPGKLSWVLYCDIICLDYDGNILDACTFALLAALKNVQLPEVTINEETGLAEVN
LKKKSYLNIRTHPVATSFAIFDDTLLIVDPTGEEEHLATGTLTVVMDEEGKLCCLHKPGG
SGLTGAKLQDCMSRAVTRHKEVKKLMDEVIKSMKPK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgggttcaaaactgtggaacctctggagtattacaggagatttttgaaagag
aactgccgtcctgatggaagagaacttggtgaattcagaaccacaactgtcaacataggt
tcaattagtactgcagatggttctgctttagtgaagctgggaaatactacagtaatttgt
ggaattaaggcggaatttgcagcaccaccaacagatggccctgataaaggatatgttgtt
cctaatgtggatctaccacctctgtgttcatcgagatttcggtctggacctcctggagaa
gaggcccaagtggctagccagttcattgcagatgtcattgaaaattcacagataattcag
aaagaagacttatgcatttctcccggaaagctttcttgggttctgtactgtgatatcatt
tgcctcgactatgatgggaacatcttggatgcctgtacatttgctttgttagcagcctta
aaaaatgtacagctgccagaagttactataaatgaagaaactggtttagcagaagttaat
ttaaagaagaaaagttatttgaatattagaactcatccagttgcaacttcctttgctata
tttgatgacactctgctcatagttgaccctactggagaggaggaacatctggcaactgga
accttaacagtagtaatggatgaggaaggcaagctatgttgtcttcacaaaccaggtgga
agtgggctgactggagctaaacttcaggactgtatgagtcgagcagttaccagacacaaa
gaagtaaaaaaactgatggatgaagtaattaagagtatgaaacccaaataa
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