Lutra lutra (Eurasian river otter): 125096341
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Entry
125096341 CDS
T08100
Name
(RefSeq) FRAS1-related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125096341
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
llv04091
]
125096341
Lectins [BR:
llv04091
]
C-Type lectins
Lecticans
125096341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
DAG1
Motif
Other DBs
NCBI-GeneID:
125096341
NCBI-ProteinID:
XP_047579195
LinkDB
All DBs
Position
3:135042674..135200973
Genome browser
AA seq
3174 aa
AA seq
DB search
MHAARTPGIASGASGVANPTSFQQIPTLPPLLVLLLLLLLSPVSCVPAQPAAPERALLSP
DLAGAAGVPAEEAIVLANRGLRVPFGREVWLDPLHDLVLQVQPGDRCSVTVLDNDALAQR
PGRLSPKRFPCDFGPGEVRYSHLGARSPSRDRIRLQLRYDAPGGAAVLPLVLEVEVVFTQ
LEVVTRNLPLVVEELLGTSNALDARSLEFAYQPETEECRVGILSGLSALPRYGELLHYPQ
VPGGASEGGAQDPLLMDCKAFQELGVRYRHTAPSRSPNRDWVPMVVELRSRGSPVGRPAL
KREHFQVLVRIRGGAENTAPKPSFVAMMMMEVDQFVLTALTPDMLAAEDAESPPDLLIFN
LTSPFQPGQGYLVSTDDRSLPLSSFTQKDLRLLKIAYQPPSEDSDQERLFELELEVVDPE
GAASDPFAFMVVVKPMNTLAPVVTRNTGLILYEGQSRPLTGPAGSGPQNLVISDEDDLEA
VQLEVVAGLQHGHLVLLGATHGSSTPKTFTVAELAAGQVVYQHDDKDGSLSDNLVLRMVD
GGRRHQVQFLFPITLVPVDDQPPVLNANTGLTLAEGETVPILPLALSATDIDSDDSLLLF
VLESPSSTAGHLLLRQTHPPREEEELSRGPWRRQGAFYEQTVTEWWQRDISEGRLFYRHL
GPHSPGPVMDQFTFRVQDNHDPPNQSGPHRFVIRIHPVDRLPPELGSGCPLRMVVQESQL
TPLRKKWLRYTDLDTDDRDLRYTVTQPPMDTDENHSPAPLGTLVLTDNPSVVVTHFTQAQ
INHHKIAYRPPEQELGVAARVAQFQFQVEDQAGNVAPGTFTLYLQPVDNQPPEILNTGFT
IQEKGHHVLSETELRVNDVDTDVAHISFTLTQAPKHGHMRVSGQILHVGEVFHLEDIKQG
RISYAHNGDESLTDSCSLEVSDRHHVVPITLRVNIRPADDEGPMLSLPAGTLGSYLDVLE
NGATEITAGVIKGTDEDTDDVMLTFVLEDPPLYGEILVNGVPAEQFTQKDILEGSVIYAH
TSGEIGLLPRGDSFNLSLSDVSQEWVIGSNTIQGVTVWVTILPVDNQAPEISVGEQFIVV
EGDKSVITSTHISAQDIDSLTDDLLCTIVIQPTSGYVENISPAPGSEKSRAGIAISAFTL
KDLRQRHINYVQSVHKGVEPVEDRFIFRCSDGINFSERHFFPIVIIPTNDEQPEIFMREF
MVMEGMSLVIDTPILNAADADMPPDDLTFTITRFPTRGHIMNQLINGTVLVESFTLDQII
ESSSIIYEHDDSETQEDSFVIRLTDGKHSVERMVLIIVIPVDDETPRMMINNGLEIEIGE
TKIINNKILMATDLDSEDKSLVYIIRYGPGHGLLQRRKPTGALENITLGMNFTQDEVDRN
LIQYVHFGQEGIRDLIKFDVTDGINALIDRYFYVSIGSIDTVFPDVISKGVSLKEGGKVT
LTTDLLSTSDLNSPDENLVFTITRAPMRGHLECTDQLGTSITSFTQLQLAGNKIYYIHTA
DDEVKMDSFEFQVTDGRNPVFRTFRISISDVDNKKPVVTIHNLVVSEGENKLITPFELTV
EDRDTPDKLLKFIVTQVPVHGQLLFNNTRPTMVFTKQDLNENLISYRHDGTESSEDSFSF
TVTDGSHTEFYVFPDTTFETRRPQVMKIQVLAVDDSVPQIAVNKGASTLRTLPTGHLGFM
ITSKILKAEDRDSLHFSLRFIVTEAPRHGYLLNLDRGNHSVTQFTQADIDDMKICYVLKD
GANATSDMFHFTVEDGGGNKLTKQHFRLNWAWISFEKEYYLINEDSKFLDVVLKRRGYLG
ETSFISIGTRDGTAEKDKDFKGKAQKQVQFNPGQTRATWRVRIMSDGEHEHSETFQIVLS
EPVLAALEFPSVITVEIVDPGDESTVYIPQSEYSVEEDVGELFIPIRRSGDVSQELMVVC
YTQQGTAGGTVPTSVLSYSDYISRPEDHTSVIRFDRDEHEKMCRIIVIDDSLYEEEETFH
VLLSMPMGGRIGSEFPAAQIKIIPDKDDEPVFYFGDVEYPVDESAGYVEVRVWRTGTDLS
RSSSVTVRSRKTDPPSADAGTDYVGISRNLDFTPGVNMQTVRVIILDDLGQPVLEGIEKF
ELVLRMPMNAALGEPSKATVSINDSVSDLPKMQFKERVYTGNENDGQIVAVVHRSGDLHY
GSSVRCYTRQGSAQVMTDFEERPNTDSSIITFLPGETEKPCVLELMDDKLYEEVEELRLV
LGTPQSNSPFGAAVGEQNETLIRIQDDADKTVIKFGETKFSVSEPKELGQSVVVKIPVIR
QGDTSKVSIVRVHTKDGSATSGEDYHPVSEEIEFKEGETQHIVNIEVIFDGIREMREAFT
VHLKPDENMVAETQVTKAIVYIEEMNSMADVTFPSVPQIVSLLMYDDTSRAKDSAGPVSG
YPVICITACNPKYSDYDKTGSICASENINDTLTRYRWLTSAPAGPDGVTSPMREVDFDTF
FTSSKMITLDSIYFQPGSRVQCAARAVNANGNEGLELMSPIVTVGREEGLCQPRVPGTVG
AEPFSAKLRYTGPEDPDYTNLIKLTVTMPHIDGMLPVISTKELSNFELTLSPDGSRVGNH
QCSNLLDYTEVKTHHGFLTDATKNPEVIGETHPYQYSSSIRGSSTLRFYRNLNLEACLWE
FVSYYDMSELLTDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGVGGWQHFDLKS
ELRLTFVYDTAILWNDGIGSPPEAELQGSLYPTSMRIGEEGRLVVNFKTEAQFHGLFVLS
HPASFTSSMIMSADHPGLTFSLRLIRSEPTYNQPMQQWSFMSDFAVRDYSGTYTVKLLPC
TTPSHQEYRLPVTCNPQEPVTFDLDIRFQQVSDPVAAEFSLNTQMYLLSKKSLWLSDGSM
GFGQESDVAFAEGDIIYGRVMVDPVQNLGDSFYCSIEKVFLCTGADGYVPKYSPTNAEYG
CLADSPSLLYRFKIVDKAQPETQATSFGNVLFNAKLAADDPEAILLVNQPGSDGFKVDST
PLFQVALGREWYVHTIYTVRSKDNANRGIGKRSTEYQHHSIVGPGKPEATSQSRKKREIR
SPPPLAWDIGADNNRGTNIQHIALDRTSRKQVPQGRVPPDDVLPRELNRPSSDISLVTVV
GSIAVGFLTLCLAAITVMMCRRRKGARRKGALKGSGSSKPMMAPQSHQGDSSEV
NT seq
9525 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcggccaggactcccgggatcgcctccggcgccagcggggtggccaaccccacc
agttttcagcagatacctacgctgccgcccctcctcgtgttgctgctgctgcttctcctg
tcaccggtaagctgcgtcccggcacagcccgctgcccctgagcgagcgttgctgtccccg
gatctcgcgggggctgcaggggtccccgccgaggaggccatagtgctggcgaaccgtggg
ctccgggtgcccttcggccgcgaggtctggctggatccgcttcacgacctggtgctgcag
gtgcagccaggggaccgctgctcggtgaccgtgctagacaacgacgcgctggcccagagg
cctggccgcctgagtcccaagcgcttcccgtgcgacttcggcccgggagaggtacgctac
tcgcacctgggcgcgcgcagcccatcgcgggatcgcattcggctgcagctgcgctacgac
gcgccgggaggggcagcagtgctacccttggtgctggaggtggaggtggtcttcacccag
ctagaggttgtgactcggaacttgcccctcgtcgtggaggagctgctggggaccagtaat
gccctggacgcgcggagcctggagtttgcctaccagcccgagaccgaggaatgtcgcgtg
ggcatcctgtccggcctgagcgcgctgcctcgctacggggagctccttcactacccgcaa
gttccaggtggagccagcgaggggggcgcccaggatcctctcctgatggactgcaaagct
ttccaggaactaggcgtgcgctaccgccacacggcccccagtcggtccccaaacagggac
tgggtgcccatggtggtggagctgcggtctcgtggttcgcctgtgggcaggcctgctctg
aaacgtgagcacttccaggtgctggtgagaatccgaggaggggccgagaacaccgccccc
aagcccagttttgtggccatgatgatgatggaggtggatcagtttgtactcaccgccctg
accccagacatgctggccgctgaggatgctgagtctccccccgacctgttgatcttcaac
ctcacctctcccttccagcctggccagggctacctagttagtactgatgatcgcagcctg
cccctctcctctttcactcagaaggacctgcggctcttgaagattgcctaccagcccccc
tctgaggactctgaccaggagcggctctttgaactggagttggaggtagtggacccggaa
ggagctgcctcagacccttttgcttttatggtagtggtgaagcccatgaacacactggct
cccgtggtcacccggaacaccggccttattctctatgagggccagtcccggccccttaca
ggccctgcgggcagtgggccacaaaacttggtcatcagtgatgaggatgacctggaggca
gtgcagctggaggtggtggctgggctccagcatggtcaccttgtccttctgggtgccacc
catggcagctccacccctaagacctttacggtggctgagctagcggccggccaggtggtc
taccaacacgatgacaaagatggctcactgagtgacaaccttgtccttcgaatggtggat
ggaggacgccggcaccaggtgcagttcctgttccccatcaccttagtgcctgtggatgac
cagccaccagtcctcaatgctaacacagggctgacattggcagaaggtgagacagtgccc
atcctgccccttgctctaagtgcaactgacattgactcagatgactctctgctgcttttt
gtgctggagtcgccctcctcgactgcagggcatctgcttctccgccaaacgcatcctccc
cgtgaggaggaggagctgagcaggggcccttggaggagacagggagcattctatgagcaa
acagtgacagagtggtggcagcgggacataagcgagggacggctgttctacaggcatttg
gggccccacagtcctgggccagtgatggaccagttcacatttcgggtccaggataaccat
gatcctcctaatcagtctggaccacacagatttgtgatacgcattcaccctgtagatcgc
ctccctccagagctgggtagcggctgtccccttcggatggtggtgcaggaatcccagctc
acccctctgaggaagaagtggctgcgctacaccgacctggacacggatgaccgagacctg
cgttacacagtgacccagcctcccatggacacagacgaaaaccactcgcccgccccactg
ggcaccttggtcctgaccgacaacccctcagttgtggtgacccattttacccaagcccag
atcaaccaccataaaattgcttacagacctccagagcaagaactgggagtagctgcccga
gtggcccagttccagttccaggtggaggatcaagctgggaatgtggctccgggcaccttc
acgctttacttgcagccagtggacaaccagccacctgagatcctcaacacgggtttcacc
attcaggagaagggccaccatgtcttgagtgagaccgagttgcgtgtgaatgatgtagac
actgacgtcgcccacatctctttcactctcacgcaggcgcccaaacacggccacatgaga
gtgtctggacagatattgcatgttggggaggtcttccacttagaagacataaaacagggt
cggatttcctatgcccataatggtgatgagtctctcactgatagctgctccttggaggtc
agtgacagacaccatgtggtgcccatcactctcagagtgaacatccggccggcagatgat
gaggggcccatgctgagccttcctgctggcactctggggtcttatctagatgttcttgaa
aatggagctactgaaatcactgccggtgttatcaaggggactgacgaggacactgatgat
gtgatgttgacttttgtcttggaagatccacccttatatggagaaatcctggtcaacgga
gttccagcagagcagtttacccaaaaggacatcttggaaggctctgtcatctatgcccac
actagcggtgagataggcctgttgcccagaggggactcttttaacctgagtctgtcagat
gtgtctcaagaatgggtaataggtagcaatactatccaaggagttaccgtgtgggtgacc
atcctccctgttgataaccaggctccagaaatttctgtaggtgaacagtttatagttgtg
gaaggtgataaaagtgttataacctcaacacatataagtgctcaagatattgattcacta
actgatgacctcttgtgcactatagttatccagcctacctccggttatgttgaaaacatt
tctccagccccgggctctgagaaatcaagagcaggaattgccataagtgcctttaccctg
aaagacctcaggcagaggcatattaactatgtccagagtgtccataaaggggtcgaacct
gtggaagaccgatttatatttcgttgttctgatggcattaacttttcagagagacatttt
ttccccattgtcatcattcccaccaatgatgaacagccagaaatatttatgagagaattt
atggtgatggagggcatgagtctggtgattgatacgcccatcctcaatgctgctgatgct
gacatgcccccagatgatctaactttcactattacccgatttcctactcgaggtcacatc
atgaaccagctgataaatggcacagttttggttgaaagcttcaccttggatcagatcata
gagagttcaagcattatttatgagcatgatgactccgagacccaggaagacagttttgtg
attagactaacagatggtaagcactcagtggaaaggatggtcctcattatagttatccca
gttgatgatgagacccccagaatgatgatcaataatggactagaaatagaaattggggaa
accaaaattatcaacaacaaaatattaatggcaacggatttggactctgaagacaaatct
ttggtttatattattcgatatgggccaggacatggcttattgcagagacgaaaacctaca
ggtgccttggaaaatatcacactgggcatgaattttacccaggacgaagtggacagaaac
ttaattcagtatgtccattttggacaagagggcattcgggacctaattaaatttgatgtg
actgatggaataaatgccctcatagatcgctacttttatgtttccattgggagcattgac
actgtcttcccggatgtgataagcaaaggagtatccttgaaagaaggtggcaaagtcacc
ctcacaacagacctactaagcaccagtgacttgaacagtcccgatgaaaacttagttttt
accatcaccagggctcccatgagaggtcacttagagtgcacagatcaacttggaacatcc
atcacatctttcactcagctccaactggctggcaacaaaatctactacatccacacagct
gacgacgaagtcaagatggacagctttgagtttcaggtcactgatggacgtaaccctgtc
ttccggacattccgtatctccattagtgatgtggataacaaaaaaccggtggtcaccatc
cataacctggttgtcagtgaaggtgaaaacaagctgatcactccctttgaactcactgtc
gaagacagagatactcctgacaaactcctgaagttcattgtcacccaggtgcctgttcac
ggtcaactcctgttcaacaataccagacccaccatggtttttaccaaacaagacttgaat
gaaaacttaatcagctatagacatgatggcactgagtcgagtgaagacagcttctccttc
acggtgactgatggttcccatacagagttctatgttttccctgatacaacatttgaaaca
aggagaccccaagtgatgaaaatccaggtcttagctgttgacgatagtgtcccccaaatt
gctgtgaacaaaggggcctccacacttcgcactctgcctactggtcacttggggttcatg
atcacaagcaaaatattgaaagcagaggacagagacagcctacatttttctctcaggttt
attgtgacagaggcccctcgacatggctatctcctcaacctggacagaggcaaccacagt
gtgactcagtttacacaagctgacattgatgacatgaaaatatgctacgttttaaaagac
ggggccaatgccacaagtgatatgttccattttacagttgaagatggtggtggaaacaaa
ttaaccaagcagcattttcgtctgaattgggcatggatctcctttgaaaaggaatattac
ttgatcaatgaggactccaaatttctagatgtcgttcttaaacgtagaggttacttggga
gagacttcatttataagtattggcacaagagacgggactgcagaaaaagacaaagacttc
aagggcaaagcgcagaaacaagtgcagttcaacccaggccagaccagggccacctggaga
gttcggatcatgagtgacggggagcatgagcattcggagactttccagatcgttctgtca
gagccggtgctggctgctctggaattcccctcagtgatcacggtggagattgttgaccca
ggcgatgagtcgactgtatatattccccagtccgaatactccgttgaagaagatgttggt
gagctgttcattcccatccggagaagtggagacgtgagccaggagctgatggtggtctgt
tacacacaacaaggcacagcaggtggaactgtgcccacatcagtgctgtcctattcagat
tacatatccaggccggaggaccacaccagtgtcatccgctttgacagagatgagcacgag
aaaatgtgtcgcatcattgttattgacgactccttgtatgaagaagaggaaacattccat
gtccttctgagcatgcccatgggtgggaggattggatcggagttcccagcagctcagatt
aagatcatccctgacaaagacgatgaacctgtcttctactttggcgacgtcgagtaccct
gtggacgagagcgccggctacgtggaggtgcgggtgtggagaacaggcacggacctatcc
aggtcttccagtgtcaccgtgagatcccggaaaacggatcctccctctgctgacgctgga
acagactacgtgggaatcagtcggaatttagatttcacacctggagtcaacatgcagacc
gttcgtgttatcatcctggatgaccttgggcagccggtgctggagggaattgagaaattt
gaactggtgcttcgtatgcctatgaatgctgccctcggcgagcccagcaaagccacagtg
tccataaatgattctgtctcagatttgcctaagatgcagttcaaagaacgagtatatact
ggcaacgaaaatgacgggcagattgttgcagtggtccacaggagtggagaccttcactac
gggtcttccgtgagatgctacacaaggcagggctctgcgcaggtgatgacggactttgag
gaacgtccaaacacggatagctccatcatcacgtttcttcctggtgagactgaaaaacct
tgtgtccttgagctgatggatgacaaactctatgaggaggtcgaggagctccgcctggtt
cttggcaccccacaaagcaactccccctttggggctgcagttggggaacaaaatgaaact
ttgataaggatccaagatgacgccgataagactgtgattaaatttggagaaaccaaattt
agcgtcagtgaacccaaagaactgggacagtcagtggttgtaaaaattccagtgattcgc
caaggagatacttcaaaggtttccattgtgagagtccacaccaaggatggctccgctacc
tctggagaagattatcaccctgtgtcagaagaaattgagtttaaggagggagaaacccag
catattgttaacattgaagtaatcttcgatgggatcagagagatgagagaggccttcact
gttcacctaaaacccgatgagaacatggtagcagagacgcaggtgaccaaagccattgtg
tatatagaagaaatgaacagcatggcagatgtcacttttccttctgtccctcagattgtg
tcattactgatgtatgatgacacttccagagctaaagatagtgctggacccgtgtctggc
tatcctgtcatctgtatcacagcctgcaaccctaaatactcagactatgacaaaacgggc
tctatttgcgcaagtgagaacatcaacgacaccttgacccgctatcgatggctcaccagc
gcacctgctggccctgatggcgtcaccagccccatgagagaagtggactttgacaccttt
tttacgtcatccaagatgatcaccttagactccatatacttccagcctggctccagggtg
cagtgcgcagcccgtgctgtgaatgccaacggcaacgaaggcctggagctgatgagccct
attgtcacggttggcagagaagaaggtctgtgtcagccccgggtgccagggacggtggga
gcagagccattctccgctaagctgcgctacacgggccccgaggacccagactacacaaac
ctcatcaagctcacggtcacgatgccacacatagatggcatgctccctgtgatctccact
aaagagctgtccaactttgagctcaccctcagtcctgatggctcaagagttggaaaccac
cagtgctccaaccttctggattataccgaagtgaagactcaccatggtttcttaactgat
gctacaaaaaatccagaagtaattggagagacgcatccttaccagtacagctcatctatc
agaggctctagtaccttacgcttctatcgaaacctgaacctggaggcctgtttgtgggag
tttgttagctactatgacatgtcagaacttctcactgactgtgggggcaccatcgggaca
gatggacaggtcctaaatctagtgcagtcctatgtgacccttcgagtgcctctgtatgtt
tcctacgtgttccattccccggttggggtaggaggctggcagcattttgacttgaagtcg
gagctgcgcctaacttttgtgtatgacactgccatcttgtggaatgatggaatcggcagt
ccaccagaagctgaactccaaggttctctctaccccacgagcatgcgcatcggtgaagag
gggcgcttggtggtgaactttaagacagaggctcagttccatggtctgttcgtgctgtcc
catcccgcatccttcacgagctcaatgatcatgtcagctgatcatccaggcctgaccttc
tccctgcgcctcatcaggagtgaaccgacctataaccagcccatgcaacagtggagcttt
atgtctgactttgcagtacgtgactattcagggacttacacagtgaaactgctgccttgc
accactccatcgcatcaagagtaccgcctgccagtcacctgcaacccccaagagcctgtc
acctttgaccttgacattcggttccaacaggtcagcgatccagtggcagctgagttcagc
ttgaacacccagatgtacctcctctccaagaaaagcctctggctgtctgatggatccatg
ggatttgggcaagagagtgatgttgccttcgcagaaggggacatcatttatgggcgtgtc
atggtagatcctgtccagaatctgggtgactccttttactgcagcattgagaaggtgttt
ctgtgcactggagctgacggctatgttcccaaatacagtcccacgaatgcagaatacggc
tgcttagctgactctccttcactcttatatagatttaaaattgtggacaaagctcagcca
gagacgcaagccaccagttttggaaatgtcctgtttaatgccaagctagcagccgatgac
cctgaagctattctcttagtgaatcagcctggatccgatggctttaaagttgactcaaca
ccactctttcaggttgccctgggtcgggaatggtacgtacacacgatctacacggtaaga
tcaaaagacaacgccaatcgaggcatcggcaaaagaagtactgagtaccagcaccactcc
atagtgggtccagggaagccagaggccacaagccagagccggaagaagagggagatcagg
agcccacccccgctggcatgggacataggtgctgacaacaaccggggaaccaacatccag
cacattgccctggaccgcaccagcaggaagcaggtcccccaggggcgagttcctcctgat
gacgtcctccctcgtgagctcaaccggcccagctccgacatcagcctggtcacagtcgtt
ggcagcatcgcggtggggttcctcactctctgcctcgctgccatcacagtgatgatgtgc
aggaggaggaagggtgccaggaggaagggcgccctgaaaggctcaggcagtagcaagccc
atgatggccccacagagccaccagggagacagctcagaggtttga
DBGET
integrated database retrieval system
