Lutra lutra (Eurasian river otter): 125096780
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Entry
125096780 CDS
T08100
Name
(RefSeq) leukocyte surface antigen CD47-like isoform X1
KO
K06266
CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04148
Efferocytosis
llv04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125096780
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125096780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
llv04515
]
125096780
04090 CD molecules [BR:
llv04090
]
125096780
Cell adhesion molecules [BR:
llv04515
]
Immunoglobulin superfamily
CD47
125096780
CD molecules [BR:
llv04090
]
Proteins
125096780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD47
V-set_CD47
FIIND
Motif
Other DBs
NCBI-GeneID:
125096780
NCBI-ProteinID:
XP_047579680
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All DBs
Position
1:complement(56271884..56317831)
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AA seq
320 aa
AA seq
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MLPLVVLLLGSASCGSAQLIFNITKSVEYTACNESVIIPCFVNNVEATNINEMYVKWKLK
GKDIFTFNGALQKTTHGDKFKSTKIIPQKLLTGIASLEMDKEEAVVGNYTCEVTELSREG
ETIVELKYRIVSWFSPNENILIVIFPILAVLLSWGQFGIVTIKYKSSLVKEKTILLFVGG
LVLTIVVIVGAILFVPGEYSTKNSCGLGLIVIPTVILILLQYCVFIIGVCMSPFTIAILI
LQVLGYVLSVVGLSLCVSECTPVHGPLLIAGLGIIALAELLGLVYMKLVASNQKTIQPPR
KAVEEPLNAFKESKGMMNDE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccctggtggtgctgctgctgggctcggcgagctgcggttcagctcagctaata
tttaacataaccaaatctgtagaatacactgcttgcaatgaaagtgttatcatcccatgc
tttgttaataacgtggaggcaacaaacattaatgagatgtatgtaaagtggaaattaaaa
ggaaaagacattttcacctttaatggagctctgcagaagaccactcatggtgataagttt
aagagtacaaaaatcataccacaaaaattactaactggcattgcatctttggagatggat
aaggaagaagctgttgtaggaaactatacttgtgaagtaaccgaattaagcagagaaggc
gaaaccatcgtagaactaaaatacagaattgtttcatggttttctccaaatgaaaatatc
ctcattgttattttcccaattttggctgtacttctgtcttggggccagtttggtattgtg
acaattaaatataaatccagtcttgtgaaggagaaaaccattcttttatttgttggtgga
ctagtgctcactatagttgtcattgtcggagccattctttttgtcccaggtgaatattca
acaaagaattcttgtggacttggtttaattgtaattcctacagtgatattaatattactt
cagtactgtgtgtttataataggtgtttgtatgtctcccttcaccattgccatactaata
ctccaggtactgggctatgtgctttctgtggttggactaagcctctgtgtctcagagtgc
accccagtgcatggccctcttctgattgcaggtttgggtattatagctctagcagaatta
cttggattagtttatatgaaacttgttgcttccaatcagaagactatacaacctcctagg
aaagctgtagaggagccccttaatgcatttaaagaatcaaaaggaatgatgaatgatgag
taa
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