Lutra lutra (Eurasian river otter): 125096783
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Entry
125096783 CDS
T08100
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03082
ATP-dependent chromatin remodeling
llv04714
Thermogenesis
llv05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125096783
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
125096783
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
125096783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125096783
03021 Transcription machinery [BR:
llv03021
]
125096783
03036 Chromosome and associated proteins [BR:
llv03036
]
125096783
Transcription factors [BR:
llv03000
]
Eukaryotic type
Helix-turn-helix
ARID
125096783
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125096783
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125096783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
125096783
NCBI-ProteinID:
XP_047579679
LinkDB
All DBs
Position
4:complement(177948888..178019170)
Genome browser
AA seq
2283 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEGP
AVGPPQSLGKELQDGAESNGGGGGGGAGAGGGPGAEPDLKNSNGNAGPRPALNNNLTEPP
GGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGL
AALQSGGGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTP
GSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLL
TSPSSARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAASGGAQQRSH
HAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPSSGPQQGHGYP
GQPYGSQTPQRYPMAMQGRAQSAMGGLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPHP
QQQQPPYSQQPPSQNPHAQPSYQQQPQSQPPQLQASQPPYSQQPSQPPHQQSPTPYPSQQ
STTQQHPQSQPPYSQPQAQSPYQQQQPQQPASSTLSQQAAYPQPQSQQSQQTAYSQQRFP
PPQELSQDSFGSQASSAPSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGV
STSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPG
NQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQM
HTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAGGQM
HGQPGIPPYGTLPPGRISHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAM
HVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNSAGM
AASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERK
MWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLN
VGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSM
QGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSDPTFQK
RNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGGMRKAPGSDPFMSSGQGPNGGMGDPYS
RAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMGTGAPQPNLMPSNPDSGMYSP
SRYPPQQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPA
KRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNTYPATAAA
ATERRPAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQASAEVAQQGTMWQGR
NDMTYNYTNRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSAPV
PPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVP
ASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLL
AESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQ
RTLLDPGRLSKASSPAPVEGEEEEDLLGPKLEEEEEEEVVENDEEMAFSGKDKAASESSE
EKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESK
TELLPTRPHVPCPPVTRKQVTAAEGTPGTTEQEGPPPDGPPEKRITATMDDMLSTRSSTL
AEEGAKSAEATKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCV
CVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVS
CNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDP
FSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPV
CREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPP
FEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLI
GQS
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagcggagcagcagcagcgggaggaggcggggggcgaggcggcggcg
gcggcagcggccgagcgcggggaaatgaaggcagccgccgggcaggaaagcgagggcccc
gccgtggggccgccgcagtcgctgggaaaggagctgcaggacggggccgagagcaatggg
ggtggcggcggcggtggagccggcgccggcggcgggcccggcgcggagccggacctgaag
aactcgaacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccgccc
ggcggcggcggcggcggcagcagcgatggggtgggggcgcctcctcactcagccgcggcc
gccttgccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgccgtc
gccgccgcggcggccgccgtcttccaccaacaacatggcggacaacaaagccctggcctg
gcagcgctgcagagcggcggcggcggcggcgggggcctggagccttacgcggggccccag
cagaactcgcacgaccacggcttccccaaccaccagtacaactcctactaccccaaccgc
agcgcctaccccccgcccccccaggcctacgcgctgagctccccgagaggtggcactccg
ggctccggcgcggcggcggccgccggctccaagccgcctccctcctccagcgcctccgcc
tcctcgtcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggcccc
tcagcggccggcgggggaaccccccagcccaccgccacccccaccctcaaccaactgctc
acgtcgcccagctcggcccggggctaccagggctaccccgggggcgactacggcggcggg
ccccaggacgggggcgccggcaagggcccggcggacatggcctcgcagtgctggggggct
gcggcggcggcggcggcggcggcagcagccgcctcgggaggggcccaacaaaggagccac
cacgcgcccatgagccccgggagcagcggcggcggggggcagccgctcgcccggaccccg
cagccatccagtccaatggatcagatgggcaagatgagacctcagccatatggcgggact
aacccatactcgcaacaacagggaccttcatcaggaccgcagcaaggacatgggtaccca
gggcagccatatgggtcccagaccccgcagcggtacccgatggccatgcagggccgggcg
cagagtgccatgggcggcctctcttatgcacagcagattcctccttacggacaacaaggc
cccagtgggtatggtcagcagggccagactccatattacaaccagcaaagtcctcacccc
cagcagcagcagccaccctactcccagcagccaccatcccagaaccctcacgcccagcct
tcctatcagcagcagccgcaatctcagccaccacagctccaggcttctcagcctccctac
tcccagcagccatcccagcctccacatcagcagtccccgactccatacccctcccagcag
tccaccacccagcagcacccccagagccagcccccttactcacagccgcaggcacagtct
ccctaccagcagcagcaacctcagcagccagcctcctcgacgctctcccagcaggctgcg
taccctcagccccagtctcagcagtcgcagcaaactgcctattcccaacagcgcttccct
ccaccacaggagttatctcaagattcatttgggtctcaggcatcctcagccccctccagt
aagggagggcaagaagatatgaacctgagtcttcagtcaagaccctcaagcttgcctgat
ctgtctggttcaatagacgatctcccaatggggacagaaggagctctgagccctggagtg
agcacatcagggatttccagcagccaaggagagcagagtaatccagctcagtctcctttc
tctcctcatacctcccctcacctgcctggcatccgaggcccctccccatcccctgttggc
tcccccgccagtgttgctcagtctcgctcaggaccgctctcgcctgctgcagtgccaggt
aaccagatgccacctcggccacccagtggccagtcggacagcatcatgcatccttccatg
aaccaatcgagcattgcccaagatcgaggttacatgcagaggaacccccagatgccccaa
tacagttcccctcagcccggctcggccttatctccgcgtcagccttcaggtggacagatg
cacacaggcatgggctcctaccagcagaactccatggggagctacggtccccaggggagt
cagtatggcccacagggaggctaccccaggcagccaaactataacgccttgcccaatgct
aactaccccagtgcaggcatggccggaagcatgaaccctatgggtgctggaggtcagatg
catgggcaacctggcatcccaccttatggcacactccctccagggagaataagtcatgcc
tccatgggcaaccggccttatggtcctaacatggccaatatgccacctcaggttgggtca
gggatgtgtcccccaccagggggcatgaaccggaaaactcaagaaactgctgttgccatg
catgttgctgccaactctatccaaaacaggccaccaggctaccccaatatgaatcagggg
ggcatgatgggaactggacctccctacggacaagggattaatagtatggctggcatgatc
aaccctcagggacccccgtatcccatgggtgggaccatggccaacaattcagcagggatg
gcagccagcccagagatgatgggccttggggatgtcaagttaactccagccaccaaaatg
aacaataaggcagatgggacacccaagacagaatccaaatccaagaaatccagttcttct
actacaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcctgagaggaag
atgtgggtggaccgttatctggccttcacggaggagaaggccatgggcatgacaaatctg
cctgctgtgggtaggaaacctctggacctctatcgcctctatgtgtctgtgaaggagatt
ggtggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcgaccaacctcaac
gtgggcacctcaagcagtgctgccagctccttgaaaaagcagtacatccagtgtctctat
gcctttgagtgcaagattgaacggggagaagaccctcccccagacatctttgcagctgct
gattccaagaagtcccagcccaagatccagcctccctctcctgcgggatctgggtctatg
caggggccacagacacctcagtcaactagcagttccatggcagaaggaggagacctgaag
ccaccaactccagcatccacaccacacagtcagatcccgcccttgccaggcatgagcagg
agcaattcggtcgggatccaggatgcctttcctgatggaagtgaccccacattccagaag
cggaattccatgactccaaatcctgggtaccagcccagtatgaatacctctgacatgatg
gggcgcatgtcctacgagccaaataaggatccttatggcggcatgaggaaagcgccaggg
agcgatcccttcatgtcctcagggcagggccccaatggcggaatgggagacccctacagc
cgagctgccggccctgggctgggaaatgtggcgatgggaccgcgacagcactatccctat
ggaggtccttatgacagagtgaggacggagcctggaataggacccgagggaaacatgggc
actggagccccacagccgaatctcatgccttccaacccagactcggggatgtattctccc
agccgctaccccccgcagcagcagcagcagcagcagcaacgacatgattcctatggcaat
cagttctccactcaaggcaccccttccggcagccccttccccagccagcagaccaccatg
tatcagcagcagcagcagaattacaaacggccaatggatggcacgtacggccctcccgcc
aagcggcacgaaggggagatgtacagcgtgccatacagcacggggcaggggcagccccag
cagcagcagttgcccccggcccagccccagcctgccagccagcagcaagctgcccagcct
tcccctcagcaagatgtgtacaaccagtatggcaacacctatcctgccactgctgccgct
gctactgagcgccgaccagcgggtggcccccagaaccagtttccattccagtttggccga
gaccgtgtctctgcaccccccggctccaatgcccagcagaacatgccaccgcagatgatg
ggtggccccatccaagcatcggctgaggtcgctcagcaaggcaccatgtggcaggggcgt
aatgacatgacctacaattacaccaacaggcagagcactggctctgccccccagggcccc
gcctatcatggcgtgaaccgaacagatgaaatgctgcatacggatcagagggccaaccat
gaaggcccgtggccttcccatggcacgcgtcagcctccatatggtccctctgctcccgtg
ccccccatgacaaggccccctccatccaactaccagcccccgccaagcatgcagaatcac
attcctcaggtatccagccccgctcccctgccccggccaatggagaatcgcacctctcct
agcaagtctccattcctgcactctgggatgaagatgcaaaaggcaggtcccccagtacct
gcgtcgcacatagcacccgcccccgtgcagccacccatgatccggcgggacatcaccttc
ccacctggctctgtcgaagccacacagcctgtgttgaagcagaggaggcggctcacaatg
aaagacatcggaaccccggaggcatggcgggtaatgatgtccctcaagtctgggcttctg
gccgagagcacgtgggcattagacaccattaacatcctgctgtacgatgacaacagcatc
atgaccttcaacctcagtcagctcccaggtttgctagagctccttgtggaatatttccga
cgttgcctgatcgagatctttggcattttaaaggagtatgaggtgggtgacccaggacag
agaacactactggaccctgggagactcagcaaggcatctagtccagcccccgtggagggg
gaggaggaggaagaccttctaggtcctaaactagaggaggaagaagaggaggaagtagtg
gaaaatgacgaggagatggccttttcgggcaaggacaaggcagcctcagagagtagtgag
gagaaactgattagtaagtttgacaagcttccagtaaagatcgtgcagaagaatgacccg
tttgtggtggactgctcagataagcttgggcgcgtgcaggagtttgacagtggcctgctg
cactggcggattggtgggggggataccactgagcatatccagacccactttgagagcaag
acagagctgttgccgacccggcctcatgtgccctgcccaccagtcacccggaaacaggtc
acggcagcagagggtacgccagggacaacagaacaggagggccccccacctgatggccct
ccagagaaacggatcacagcaacaatggatgacatgttgtccacccggtctagcacattg
gccgaggagggagctaagagtgcagaggccaccaaggagagcagcaagtttccattcggc
atcagcccggcacagagccaccgaaacatcaagatcctagaggacgaaccccacagtaaa
gatgagaccccactgtgtacccttctggactggcaggattccctcgccaagcgctgtgtc
tgtgtctccaataccatccgaagcctgtcgtttgtgcccggcaacgactttgagatgtcc
aaacacccagggctgctgctgatcctgggcaagctgatcctcctacaccataagcaccca
gagcggaagcaggcaccactgacttacgagaaggaggaggagcaggaccaaggggtgagc
tgcaacaaagtggagtggtggtgggactgcttggagatgctccgggaaaacaccttggtc
acgctcgccaacatctcgggccagttggacctctccccataccctgagagcatttgcctg
cctgtcctggacggactcctgcactgggccgtctgcccttccgctgaagcccaggacccc
ttctccaccctgggccccaacgccgtcctctccccccagagactggtcttggaaaccctt
agcaaactcagcatccaggacaacaatgtggacctgatcctggccacaccccccttcagc
cgcctggagaagttgtatagcaccatggtgcgcttcctcagtgaccgaaagaacccagtg
tgccgggagatggccgtggtgctgctggccaacctggctcagggcgacagcctggcagcc
cgcgccatcgccgtgcagaagggcagcatcggcaacctcctcggcttcctggaggacagc
ctcgctgccacacagttccagcagagccaggccagcctgctccacatgcagaacccaccc
tttgagccgacgagtgtggacatgatgcggcgggctgcccgcgcactgctggccctggcc
aaggtggacgagaaccactcagagttcacgctgtacgagtcacggctgttggacatctcg
gtatcgccgctgatgaactccttggtttcacaagtcatttgtgatgtactgtttctgatt
ggccagtcatga
DBGET
integrated database retrieval system
